For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSNAGKYLALPVAAVVGLSTACNAAPAEDFSKADIARVAEVKSGFAPSYTVNTVGPAALDPRFLTAQKLP PGLTFDPQDCAKSATENTVPEGVKGNMAATTAEGDGVRYIVIAVETSDAVPVNTPSDQCRKVTFTGAGMR GLVEVVEAPAVDGVTTVGTHRVLQTVTEEGPRTGELYNYVATFGNFIVIVTANPLVVADKPVARIDTQRA RDLVTQAVGLVKG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1920 | - | - | 100% (223) | hypothetical protein Mflv_1920 |
M. gilvum PYR-GCK | Mflv_1919 | - | 4e-06 | 22.51% (191) | hypothetical protein Mflv_1919 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1026 | - | 2e-62 | 54.67% (214) | hypothetical protein Mb1026 |
M. tuberculosis H37Rv | Rv0999 | - | 2e-62 | 54.67% (214) | hypothetical protein Rv0999 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1119 | - | 4e-40 | 42.86% (189) | hypothetical protein MAB_1119 |
M. marinum M | MMAR_4494 | - | 6e-56 | 53.68% (190) | hypothetical protein MMAR_4494 |
M. avium 104 | MAV_1123 | - | 3e-60 | 53.59% (209) | hypothetical protein MAV_1123 |
M. smegmatis MC2 155 | MSMEG_5452 | - | 1e-65 | 52.86% (227) | hypothetical protein MSMEG_5452 |
M. thermoresistible (build 8) | TH_0933 | - | 1e-55 | 48.85% (217) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4666 | - | 6e-56 | 50.48% (208) | hypothetical protein MUL_4666 |
M. vanbaalenii PYR-1 | Mvan_4813 | - | 7e-91 | 72.65% (223) | hypothetical protein Mvan_4813 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1920|M.gilvum_PYR-GCK -----------------------------MSNAGKYLALPVAAVVGLSTA Mvan_4813|M.vanbaalenii_PYR-1 -----------------------------MSNPPKHRAVAAVVCAGLVAA Mb1026|M.bovis_AF2122/97 MRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGC Rv0999|M.tuberculosis_H37Rv MRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGC MMAR_4494|M.marinum_M ---------------------------------MSKVALALGLVCLLVGC MUL_4666|M.ulcerans_Agy99 ---------------------------------MSKVALALGLVCLLVGC MAV_1123|M.avium_104 ---------------------------------MSKLLRAVAAVCVLAGC MSMEG_5452|M.smegmatis_MC2_155 -------------------------------MSNPTRTLALVTSGLMASA TH_0933|M.thermoresistible__bu -----------------------------MLKLKSALVVALVLTGLTACS MAB_1119|M.abscessus_ATCC_1997 -----------------------------MLKPVTVKSWGIWAICALAAV Mflv_1920|M.gilvum_PYR-GCK CNAAPAED-----FSKADIARVAEVKSGFAPSYTVNTVGPAALDPRFLTA Mvan_4813|M.vanbaalenii_PYR-1 CSAGQSAD-----LSNADIARVSELKSSFPAPYTVNSVGPAGIDPRYLTA Mb1026|M.bovis_AF2122/97 SSGASSTT-----ASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSA Rv0999|M.tuberculosis_H37Rv SSGASSTT-----ASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSA MMAR_4494|M.marinum_M SHGASPS-------MTADISRVTELKSSFGPDFKVSEIPPRAIDPQFFAA MUL_4666|M.ulcerans_Agy99 SHGAAPS-------MTADISRVTELKSSFGPDFKVSEIPPRAIDPQFFAA MAV_1123|M.avium_104 SSATHPA--------KVDIAKVAEVKPSFGPDYKVSDTGERGIDPKLLAG MSMEG_5452|M.smegmatis_MC2_155 MALAGCSSDG-PAYPDADIAKVAQLKSSFGPEFKVSEVAPTGIDPKLLSP TH_0933|M.thermoresistible__bu TDDAEQDA------PQADITRIHTLGEGFGPEFKVTEVPKAGIDPRLFES MAB_1119|M.abscessus_ATCC_1997 VVAGCGRSVQNPVNHNITIGNIVSLQSEFGPEFTVKTMKPAGMDPKLLSP * .: : * . :.*. .:** : Mflv_1920|M.gilvum_PYR-GCK QKLPPGLTFDPQDCAKSATENTVPEGVKGNMAATTAEGDGVRYIVIAVET Mvan_4813|M.vanbaalenii_PYR-1 QKLPPGLTFDPADCGKSAGQQAIPEGVKGNMAATTAEGDGVRYIVLAVET Mb1026|M.bovis_AF2122/97 RKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVET Rv0999|M.tuberculosis_H37Rv RKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVET MMAR_4494|M.marinum_M RKLPDGLTFDPAICATAAVGPPLPPGLQGNMAAVTAEGNGNRFVVIAVET MUL_4666|M.ulcerans_Agy99 RKLPDGLTFDPAICATAAVGPPLPPGLQGNMAAVTAEGNGNRFVVIAVET MAV_1123|M.avium_104 RKLPDGLTFDPAQCAKVASGPDLPADLQGNMAAVTAEGRGNRFVVIALET MSMEG_5452|M.smegmatis_MC2_155 QKLPEGVKFEPADCAKFAEGQQFPPGLQGNMAATAAEGEGNRFIVMAVET TH_0933|M.thermoresistible__bu QPIPPGLTFDPPECDQFGSNRLLEPGLQGNMAAITAEGEGNRFIAIALET MAB_1119|M.abscessus_ATCC_1997 APLPPGVTVDPPDCAKYSGGSAVPAELKGNMAALTATGAGNQYVAVAVET :* *:..:* * . . ::***** :* * * :::.:*:** Mflv_1920|M.gilvum_PYR-GCK SDAVPVN-TPSDQCRKVTFTGAGMRGLVEVVEAPAVDGVTTVGTHRVLQT Mvan_4813|M.vanbaalenii_PYR-1 SEPVPVN-EPTDQCGKVTFAGPGLRGLVEVVEAPQIDGVRTVGTHRVLQT Mb1026|M.bovis_AF2122/97 SQPLPAP-SPGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQA Rv0999|M.tuberculosis_H37Rv SQPLPAP-SPGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQA MMAR_4494|M.marinum_M SQTLPTN-DPGKECAKIAFSGAGVRGGIEVVEAPHIEGVHTLGVHRVLQA MUL_4666|M.ulcerans_Agy99 SQTLPTN-DPGKECAKIAFSGAGVRGGIEVVEAPHIEGVHTLGVHRVLQA MAV_1123|M.avium_104 SKALPFN-DPGKDCAKVTFSGAQLRGGVQVVDAPQIDSARTLGVHRVLQA MSMEG_5452|M.smegmatis_MC2_155 SEPVPLS-DPGDECKRVKFLGTGARGQVDVVESPQIDDARTVGTHRIIQT TH_0933|M.thermoresistible__bu SEPISLN-KPADNCKRVTFDGPNAGGVVENVESPQIDGAETVGTHRTLET MAB_1119|M.abscessus_ATCC_1997 SQEVPFDPAVSENCKKVGFRGNGIAGQTEVIDAPSIDGARTLGMKRDVLS *. :. .:* :: * * * : :: * ::.. *:* :* : : Mflv_1920|M.gilvum_PYR-GCK VTEEG-PRTGELYNYVATFGNFIVIVTANPLVVADKPVARIDTQRARDLV Mvan_4813|M.vanbaalenii_PYR-1 TSEQG-PRTGELYNYVAHFGTFIVIVTANPLVVDGKPAARVDTQRARALV Mb1026|M.bovis_AF2122/97 VVGGS-ARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLL Rv0999|M.tuberculosis_H37Rv VVGGS-ARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLL MMAR_4494|M.marinum_M LVDGS-AHTGELYDFSAQFGDYQLNVIANPLVVPGQNVAPVDTHRARDLL MUL_4666|M.ulcerans_Agy99 LVDGS-AHTGELYDFSAQFGDYQLNAIANPLVVPGQNVAPVDTHRARDLL MAV_1123|M.avium_104 LTPGG-PRTGELYDYSAQFGDYQVIVIANPLVIPNQPVAPVDTQRARDLL MSMEG_5452|M.smegmatis_MC2_155 MVQGQ-PRTGELYNYVASFDNYMVIVTANPLVLPDKPVAKVDTERARELL TH_0933|M.thermoresistible__bu RFAGQQPNRGEVFSYVASFDNYAVIVTANPLVLPDQPVEPVDTERARNLL MAB_1119|M.abscessus_ATCC_1997 GTSGR-AIGQEVLNYSAYLGRYMVVVTVSPIAVGKVPPAMPDGKRASDLL . *: .: * :. : : . ..*:.: * .** *: Mflv_1920|M.gilvum_PYR-GCK TQAVGLVKG- Mvan_4813|M.vanbaalenii_PYR-1 AQTVGLVKGA Mb1026|M.bovis_AF2122/97 VQAVAAVRG- Rv0999|M.tuberculosis_H37Rv VQAVAAVRG- MMAR_4494|M.marinum_M VKAVQAVRH- MUL_4666|M.ulcerans_Agy99 VKAVQAVRR- MAV_1123|M.avium_104 VKAVASVRAQ MSMEG_5452|M.smegmatis_MC2_155 SAAVAAVRG- TH_0933|M.thermoresistible__bu VDAVDAVRG- MAB_1119|M.abscessus_ATCC_1997 VKAVAAVRS- :* *: