For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSKLLRAVAAVCVLAGCSSATHPAKVDIAKVAEVKPSFGPDYKVSDTGERGIDPKLLAGRKLPDGLTFDP AQCAKVASGPDLPADLQGNMAAVTAEGRGNRFVVIALETSKALPFNDPGKDCAKVTFSGAQLRGGVQVVD APQIDSARTLGVHRVLQALTPGGPRTGELYDYSAQFGDYQVIVIANPLVIPNQPVAPVDTQRARDLLVKA VASVRAQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1123 | - | - | 100% (217) | hypothetical protein MAV_1123 |
| M. avium 104 | MAV_1122 | - | 4e-06 | 25.50% (200) | hypothetical protein MAV_1122 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1026 | - | 2e-82 | 69.72% (218) | hypothetical protein Mb1026 |
| M. gilvum PYR-GCK | Mflv_1920 | - | 3e-60 | 53.59% (209) | hypothetical protein Mflv_1920 |
| M. tuberculosis H37Rv | Rv0999 | - | 2e-82 | 69.72% (218) | hypothetical protein Rv0999 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1119 | - | 4e-44 | 45.12% (215) | hypothetical protein MAB_1119 |
| M. marinum M | MMAR_4494 | - | 2e-80 | 67.59% (216) | hypothetical protein MMAR_4494 |
| M. smegmatis MC2 155 | MSMEG_5452 | - | 1e-66 | 58.57% (210) | hypothetical protein MSMEG_5452 |
| M. thermoresistible (build 8) | TH_0933 | - | 1e-52 | 46.85% (222) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_4666 | - | 5e-80 | 67.13% (216) | hypothetical protein MUL_4666 |
| M. vanbaalenii PYR-1 | Mvan_4813 | - | 3e-58 | 53.49% (215) | hypothetical protein Mvan_4813 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1026|M.bovis_AF2122/97 MRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGC
Rv0999|M.tuberculosis_H37Rv MRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGC
MMAR_4494|M.marinum_M ---------------------------------MSKVALALGLVCLLVGC
MUL_4666|M.ulcerans_Agy99 ---------------------------------MSKVALALGLVCLLVGC
MAV_1123|M.avium_104 ---------------------------------MSKLLRAVAAVCVLAGC
Mflv_1920|M.gilvum_PYR-GCK -----------------------------MSNAGKYLALPVAAVVGLSTA
Mvan_4813|M.vanbaalenii_PYR-1 -----------------------------MSNPPKHRAVAAVVCAGLVAA
MSMEG_5452|M.smegmatis_MC2_155 -------------------------------MSNPTRTLALVTSGLMASA
TH_0933|M.thermoresistible__bu -----------------------------MLKLKSALVVALVLTGLTACS
MAB_1119|M.abscessus_ATCC_1997 -----------------------------MLKPVTVKSWGIWAICALAAV
Mb1026|M.bovis_AF2122/97 SSGASSTT-----ASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSA
Rv0999|M.tuberculosis_H37Rv SSGASSTT-----ASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSA
MMAR_4494|M.marinum_M SHGASPS-------MTADISRVTELKSSFGPDFKVSEIPPRAIDPQFFAA
MUL_4666|M.ulcerans_Agy99 SHGAAPS-------MTADISRVTELKSSFGPDFKVSEIPPRAIDPQFFAA
MAV_1123|M.avium_104 SSATHPA--------KVDIAKVAEVKPSFGPDYKVSDTGERGIDPKLLAG
Mflv_1920|M.gilvum_PYR-GCK CNAAPAED-----FSKADIARVAEVKSGFAPSYTVNTVGPAALDPRFLTA
Mvan_4813|M.vanbaalenii_PYR-1 CSAGQSAD-----LSNADIARVSELKSSFPAPYTVNSVGPAGIDPRYLTA
MSMEG_5452|M.smegmatis_MC2_155 MALAGCSSDG-PAYPDADIAKVAQLKSSFGPEFKVSEVAPTGIDPKLLSP
TH_0933|M.thermoresistible__bu TDDAEQDA------PQADITRIHTLGEGFGPEFKVTEVPKAGIDPRLFES
MAB_1119|M.abscessus_ATCC_1997 VVAGCGRSVQNPVNHNITIGNIVSLQSEFGPEFTVKTMKPAGMDPKLLSP
* .: : * . :.*. .:** :
Mb1026|M.bovis_AF2122/97 RKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVET
Rv0999|M.tuberculosis_H37Rv RKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVET
MMAR_4494|M.marinum_M RKLPDGLTFDPAICATAAVGPPLPPGLQGNMAAVTAEGNGNRFVVIAVET
MUL_4666|M.ulcerans_Agy99 RKLPDGLTFDPAICATAAVGPPLPPGLQGNMAAVTAEGNGNRFVVIAVET
MAV_1123|M.avium_104 RKLPDGLTFDPAQCAKVASGPDLPADLQGNMAAVTAEGRGNRFVVIALET
Mflv_1920|M.gilvum_PYR-GCK QKLPPGLTFDPQDCAKSATENTVPEGVKGNMAATTAEGDGVRYIVIAVET
Mvan_4813|M.vanbaalenii_PYR-1 QKLPPGLTFDPADCGKSAGQQAIPEGVKGNMAATTAEGDGVRYIVLAVET
MSMEG_5452|M.smegmatis_MC2_155 QKLPEGVKFEPADCAKFAEGQQFPPGLQGNMAATAAEGEGNRFIVMAVET
TH_0933|M.thermoresistible__bu QPIPPGLTFDPPECDQFGSNRLLEPGLQGNMAAITAEGEGNRFIAIALET
MAB_1119|M.abscessus_ATCC_1997 APLPPGVTVDPPDCAKYSGGSAVPAELKGNMAALTATGAGNQYVAVAVET
:* *:..:* * . . ::***** :* * * :::.:*:**
Mb1026|M.bovis_AF2122/97 SQPLPAP-SPGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQA
Rv0999|M.tuberculosis_H37Rv SQPLPAP-SPGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQA
MMAR_4494|M.marinum_M SQTLPTN-DPGKECAKIAFSGAGVRGGIEVVEAPHIEGVHTLGVHRVLQA
MUL_4666|M.ulcerans_Agy99 SQTLPTN-DPGKECAKIAFSGAGVRGGIEVVEAPHIEGVHTLGVHRVLQA
MAV_1123|M.avium_104 SKALPFN-DPGKDCAKVTFSGAQLRGGVQVVDAPQIDSARTLGVHRVLQA
Mflv_1920|M.gilvum_PYR-GCK SDAVPVN-TPSDQCRKVTFTGAGMRGLVEVVEAPAVDGVTTVGTHRVLQT
Mvan_4813|M.vanbaalenii_PYR-1 SEPVPVN-EPTDQCGKVTFAGPGLRGLVEVVEAPQIDGVRTVGTHRVLQT
MSMEG_5452|M.smegmatis_MC2_155 SEPVPLS-DPGDECKRVKFLGTGARGQVDVVESPQIDDARTVGTHRIIQT
TH_0933|M.thermoresistible__bu SEPISLN-KPADNCKRVTFDGPNAGGVVENVESPQIDGAETVGTHRTLET
MAB_1119|M.abscessus_ATCC_1997 SQEVPFDPAVSENCKKVGFRGNGIAGQTEVIDAPSIDGARTLGMKRDVLS
*. :. .:* :: * * * : :: * ::.. *:* :* : :
Mb1026|M.bovis_AF2122/97 VVGGS-ARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLL
Rv0999|M.tuberculosis_H37Rv VVGGS-ARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLL
MMAR_4494|M.marinum_M LVDGS-AHTGELYDFSAQFGDYQLNVIANPLVVPGQNVAPVDTHRARDLL
MUL_4666|M.ulcerans_Agy99 LVDGS-AHTGELYDFSAQFGDYQLNAIANPLVVPGQNVAPVDTHRARDLL
MAV_1123|M.avium_104 LTPGG-PRTGELYDYSAQFGDYQVIVIANPLVIPNQPVAPVDTQRARDLL
Mflv_1920|M.gilvum_PYR-GCK VTEEG-PRTGELYNYVATFGNFIVIVTANPLVVADKPVARIDTQRARDLV
Mvan_4813|M.vanbaalenii_PYR-1 TSEQG-PRTGELYNYVAHFGTFIVIVTANPLVVDGKPAARVDTQRARALV
MSMEG_5452|M.smegmatis_MC2_155 MVQGQ-PRTGELYNYVASFDNYMVIVTANPLVLPDKPVAKVDTERARELL
TH_0933|M.thermoresistible__bu RFAGQQPNRGEVFSYVASFDNYAVIVTANPLVLPDQPVEPVDTERARNLL
MAB_1119|M.abscessus_ATCC_1997 GTSGR-AIGQEVLNYSAYLGRYMVVVTVSPIAVGKVPPAMPDGKRASDLL
. *: .: * :. : : . ..*:.: * .** *:
Mb1026|M.bovis_AF2122/97 VQAVAAVRG-
Rv0999|M.tuberculosis_H37Rv VQAVAAVRG-
MMAR_4494|M.marinum_M VKAVQAVRH-
MUL_4666|M.ulcerans_Agy99 VKAVQAVRR-
MAV_1123|M.avium_104 VKAVASVRAQ
Mflv_1920|M.gilvum_PYR-GCK TQAVGLVKG-
Mvan_4813|M.vanbaalenii_PYR-1 AQTVGLVKGA
MSMEG_5452|M.smegmatis_MC2_155 SAAVAAVRG-
TH_0933|M.thermoresistible__bu VDAVDAVRG-
MAB_1119|M.abscessus_ATCC_1997 VKAVAAVRS-
:* *: