For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TVAAEADPLALERQVCFALAVTNRAVLAIYRPLLEPLGLTHPQYLVMLALWDHHKKASGQATPLSVKKIA TTLQMDSATLSPMLKRLEALGFISRTRNAADERSTDVQLTDAGVALRTRALDIPPAVIERLGVDLAELEH LHHVLTRVNSAAAGALQS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1910 | - | - | 100% (159) | MarR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0960 | - | 1e-27 | 46.81% (141) | MarR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0520 | - | 9e-06 | 27.08% (144) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2911 | - | 7e-05 | 29.90% (97) | transcriptional regulatory protein |
M. tuberculosis H37Rv | Rv2887 | - | 7e-05 | 29.90% (97) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1029c | - | 3e-56 | 70.62% (160) | MarR family transcriptional regulator |
M. marinum M | MMAR_0145 | - | 8e-61 | 74.83% (151) | transcriptional regulator |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0538 | - | 2e-64 | 77.78% (153) | regulatory protein, MarR |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4952 | - | 6e-61 | 74.83% (151) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_4823 | - | 9e-68 | 81.65% (158) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1910|M.gilvum_PYR-GCK --MTVAAEADPLALERQVCFALAVTNRAVLAIYRPLLEPLGLTHPQYLVM Mvan_4823|M.vanbaalenii_PYR-1 MATPAAQELDPLALERQVCFALAATNRAVLAIYRPLLEPLGLTHPQYLVM MMAR_0145|M.marinum_M MAAPTTPQADPLALEQQVCFALAITNRAVLAVYRPLLEPLGLTHPQYLVM MUL_4952|M.ulcerans_Agy99 MAAPTTPQADPLALEQQVCFALAITNRAVLAVYRPLLEPLGLTHPQYLVM MSMEG_0538|M.smegmatis_MC2_155 MASPSSVDVDPLALERQVCFALAVTNRAVLSIYRPLLEPLGLTHPQYLVM MAB_1029c|M.abscessus_ATCC_199 -MTAVSPEVDPLALERQVCFALAVTNRAVLAVYRPLLAPLGITHPQYLVM Mb2911|M.bovis_AF2122/97 ---------MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCL Rv2887|M.tuberculosis_H37Rv ---------MGLADDAPLGYLLYRVGAVLRPEVSAALSPLGLTLPEFVCL ** : : : * .. .: . . * ***:* *::: : Mflv_1910|M.gilvum_PYR-GCK LALWDHHKKASGQA-TPLSVKKIATTLQMDSATLSPMLKRLEALGFISRT Mvan_4823|M.vanbaalenii_PYR-1 LSLWDQQKRSSGRP-SPMSVKQIARTLQIDSATLSPMLKRLEAIGLITRA MMAR_0145|M.marinum_M LALWDNQRTSSGQG-SALAVKQIAATLQLDSATLSPMLKRLEALGLVTRT MUL_4952|M.ulcerans_Agy99 LALWDNQRTSSGQG-SALAVKQIAATLQLDSATLSPMLKRLEALGLVTRT MSMEG_0538|M.smegmatis_MC2_155 LALWDHHKIRSAGV-DPLSVKQIAATLQLDSATLSPMLKRLEALGLITRT MAB_1029c|M.abscessus_ATCC_199 LTLWDHAKSGADDTREALSVKQIAALLQTDSATISPMLKRLESLGLITRP Mb2911|M.bovis_AF2122/97 RMLSQS---------PGLSSAELARHASVTPQAMNTVLRKLEDAGAVARP Rv2887|M.tuberculosis_H37Rv RMLSQS---------PGLSSAELARHASVTPQAMNTVLRKLEDAGAVARP * : :: ::* . . ::..:*::** * ::*. Mflv_1910|M.gilvum_PYR-GCK RNAADERSTDVQLTDAGVALRTRALDIPPAVIERLGVDLAELEH--LHHV Mvan_4823|M.vanbaalenii_PYR-1 RNTADERSTDVQLTDAGAELRRRALDIPAAVIERLGVDVAELEH--LHEV MMAR_0145|M.marinum_M RNATDERSTDVKLTRFGIALRERAAEVPAAVIARLGVDPTELEQ--LHRV MUL_4952|M.ulcerans_Agy99 RNATDERSTDVKLTRFGIALRERAAEVPAAVIARLGVDPTELEQ--LHRV MSMEG_0538|M.smegmatis_MC2_155 RSVGDERATDIRLTEAGIALRERALAIPPKVVERLGVDMAELEE--LHRV MAB_1029c|M.abscessus_ATCC_199 RSTADERTTHVTLTSRGAALREQALSVPAAVVERLGVNLAELEN--LHKV Mb2911|M.bovis_AF2122/97 ASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREFKRM Rv2887|M.tuberculosis_H37Rv ASVSSGRSLPATLTARGRALAKRAEAVVRAADARVLARLTAPQQREFKRM .. . *: ** * * :* : . *: . : :. ::.: Mflv_1910|M.gilvum_PYR-GCK LTRVNSA--AAGALQS- Mvan_4823|M.vanbaalenii_PYR-1 LTRINSAAVAAGALQS- MMAR_0145|M.marinum_M LTRINVAALAADAPQS- MUL_4952|M.ulcerans_Agy99 LTRINVAALAADAPQS- MSMEG_0538|M.smegmatis_MC2_155 LTRVNTAALAANGVNH- MAB_1029c|M.abscessus_ATCC_199 LTRVNTAALAAGALDTE Mb2911|M.bovis_AF2122/97 LEKLGSD---------- Rv2887|M.tuberculosis_H37Rv LEKLGSD---------- * ::.