For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LKGFKEFISRGNVIDLAVAVVVGAAFTGLVTAFTQNVVQPLVDRIGAGPDAEYGILKIPLGADQFVDLNA VLSAAINFLIVAAVIYFVIVVPFKKIKERDAKVVSTETELTLLTEIRDLLQAQSSGTAATATDRDHTEQE QPPAGK*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1892 | mscL | - | 100% (147) | large-conductance mechanosensitive channel |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1011c | mscL | 2e-35 | 51.97% (127) | large-conductance mechanosensitive channel |
M. tuberculosis H37Rv | Rv0985c | mscL | 2e-35 | 51.97% (127) | large-conductance mechanosensitive channel |
M. leprae Br4923 | MLBr_00178 | mscL | 1e-33 | 51.52% (132) | large-conductance mechanosensitive channel |
M. abscessus ATCC 19977 | MAB_1082c | - | 7e-37 | 53.44% (131) | large-conductance mechanosensitive channel |
M. marinum M | MMAR_4525 | mscL | 7e-37 | 48.61% (144) | large-conductance ion mechanosensitive channel MscL |
M. avium 104 | MAV_1098 | mscL | 4e-37 | 53.85% (130) | large-conductance mechanosensitive channel |
M. smegmatis MC2 155 | MSMEG_5482 | mscL | 1e-49 | 74.62% (130) | large-conductance mechanosensitive channel |
M. thermoresistible (build 8) | TH_0943 | mscL | 2e-41 | 59.69% (129) | POSSIBLE LARGE-CONDUCTANCE ION MECHANOSENSITIVE CHANNEL MSCL |
M. ulcerans Agy99 | MUL_4697 | mscL | 5e-37 | 48.61% (144) | large-conductance mechanosensitive channel |
M. vanbaalenii PYR-1 | Mvan_4838 | mscL | 4e-59 | 86.82% (129) | large-conductance mechanosensitive channel |
CLUSTAL 2.0.9 multiple sequence alignment Mb1011c|M.bovis_AF2122/97 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNA Rv0985c|M.tuberculosis_H37Rv MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNA MMAR_4525|M.marinum_M MLKGFKEFLSRGNIVDLAVAVVIGTAFTALVTRFTDSIITPLINRVGVNE MUL_4697|M.ulcerans_Agy99 MLKGFKEFLSRGNIVDLAVAVVIGTAFTALVTRFTDSIITPLINRVGVNE MAV_1098|M.avium_104 MLKGFKEFLSRGNIIDLSTAVVIGTAFTALVTTFTDSIIKPLINRIGVNQ MLBr_00178|M.leprae_Br4923 MFRGFKEFLSRGNIVDLAVAVVIGTAFTALITKFTDSIITPLINRVGVNQ MAB_1082c|M.abscessus_ATCC_199 MLKGFRDFLLRGNVIDLAVAVVIGAAFTALVTKFSDAIIQPLINRIGTGP TH_0943|M.thermoresistible__bu MLKGFKEFLARGNIVDLAVAVVIGTAFTGLVTRFTDSVIQPLINRIGATG Mflv_1892|M.gilvum_PYR-GCK MLKGFKEFISRGNVIDLAVAVVVGAAFTGLVTAFTQNVVQPLVDRIGAGP Mvan_4838|M.vanbaalenii_PYR-1 MLKGFKEFISRGNVIDLAVAVVIGAAFTGLVTAFTENVIQPLIDRIGAGP MSMEG_5482|M.smegmatis_MC2_155 MLKGFKEFLSRGNVIDLAVAVVIGAAFTGLVTAFTEKVIQPLIDRIGAGG *::**::*: ***::**:.***:*:***.*:* *:: :: **::*:*. Mb1011c|M.bovis_AF2122/97 QSDVGILRIGIGGG--QTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR Rv0985c|M.tuberculosis_H37Rv QSDVGILRIGIGGG--QTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR MMAR_4525|M.marinum_M QSDLGILKIGIGRG--QSIDLNVLLSATINFILVAGVVYFLVVVPYNTLR MUL_4697|M.ulcerans_Agy99 QSDLGILKIGIGRG--QSIDLNVLLSATINFILVAGVVYFLVVVPYNTLR MAV_1098|M.avium_104 KSDIGILRISIGGG--QTIDLNNVLSAAINFVIIAAVVYFLVVLPYTTLR MLBr_00178|M.leprae_Br4923 QTNISPLRIDIGGD--QAIDLNIVLSAAINFLLIALVVYFLVVLPYTTIR MAB_1082c|M.abscessus_ATCC_199 DSDHPALKVGIGGG--QYLDFNVLVTATINFVLIAAVVYFLVVLPYNTIK TH_0943|M.thermoresistible__bu ETDIGVLRIPIGGD--QAIDLNILLSALINFVIVAAVVYFLVVLPYNKLR Mflv_1892|M.gilvum_PYR-GCK DAEYGILKIPLGAD--QFVDLNAVLSAAINFLIVAAVIYFVIVVPFKKIK Mvan_4838|M.vanbaalenii_PYR-1 DAEYGILRIPLGGD--QFVDLNAVLSAAVNFLIVAAVIYFVIVVPFKKLK MSMEG_5482|M.smegmatis_MC2_155 EREYGILKIPLGGDPEQFVDLNAVLSAAINFLIVAAVLYFVIMLPYKKLR . : *:: :* . * :*:* :::* :**.::* .:**::::*:..:: Mb1011c|M.bovis_AF2122/97 K---KGEVEQPG----DTQVVLLTEIRDLLAQTNGDSPGRHGGR---GTP Rv0985c|M.tuberculosis_H37Rv K---KGEVEQPG----DTQVVLLTEIRDLLAQTNGDSPGRHGGR---GTP MMAR_4525|M.marinum_M K---KGEVEQAD----DAQIVLLTEIRDLLAQTNSNSSGRHEAPGTAGTP MUL_4697|M.ulcerans_Agy99 K---KGEVEQAD----DAQIVLLTEIRDLLAQTNSNSSGRHEAPGTAGTP MAV_1098|M.avium_104 K---RGEVEPAD----DAQVVLLTEIRDLLAQTNGDSSGKHGSVS--TTP MLBr_00178|M.leprae_Br4923 K---HGEVEQFDTDLIGNQVVLLAEIRDLLAQSNGAPSGRHVDTAD-LTP MAB_1082c|M.abscessus_ATCC_199 ERLAKSGEEPAA----QTEAELLVEIRDLLAEQKKAS------------- TH_0943|M.thermoresistible__bu A---RGEVEQAQ----DTELSLLTEIRDLLADTNG-SSGKHVSGPG-TGP Mflv_1892|M.gilvum_PYR-GCK E---RDAKVVST----ETELTLLTEIRDLLQAQSSG-----TAATA-TDR Mvan_4838|M.vanbaalenii_PYR-1 E---RDKKVEST----ETELTLLTEIRDLLRDN--------AADAA-TGR MSMEG_5482|M.smegmatis_MC2_155 E---RGEVEQAQ----DTELSILTEIRDLLAENSNGSTGKHVSGPG-TGP :. : :*.****** Mb1011c|M.bovis_AF2122/97 SPTDGPRASTESQ- Rv0985c|M.tuberculosis_H37Rv SPTDGPRASTESQ- MMAR_4525|M.marinum_M PPNYGPRADT---- MUL_4697|M.ulcerans_Agy99 PPNYGPRADT---- MAV_1098|M.avium_104 PPEYGPRAEAES-- MLBr_00178|M.leprae_Br4923 TPNHEPRADT---- MAB_1082c|M.abscessus_ATCC_199 -------------- TH_0943|M.thermoresistible__bu SPDTAETTSADRT- Mflv_1892|M.gilvum_PYR-GCK DHTEQEQPPAGK-- Mvan_4838|M.vanbaalenii_PYR-1 HGGTGPQSHADE-- MSMEG_5482|M.smegmatis_MC2_155 SPDTATYTSGDRTS