For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDADELNQLRKRVQYLEDRTAVLDCVMKQARGHDRHDAELMGSVYFEDGIDEHGPNVKTGPEYGDWANEA HTAVFEDHLHNVTTHTCEIDGDVAHAESYVMGAMRVKGGKIVSLMGGRYLDRLERRDGVWKIALRRCTIE WMISGDSSILGKGAVKGFIKGQWDKTDASYLRPLKLDDPVDRW*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1268 | - | - | 100% (184) | hypothetical protein Mflv_1268 |
M. gilvum PYR-GCK | Mflv_4431 | - | 1e-10 | 34.51% (113) | hypothetical protein Mflv_4431 |
M. gilvum PYR-GCK | Mflv_2379 | - | 2e-07 | 31.71% (123) | hypothetical protein Mflv_2379 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3501 | - | 2e-07 | 33.04% (115) | hypothetical protein Mb3501 |
M. tuberculosis H37Rv | Rv3472 | - | 2e-07 | 33.04% (115) | hypothetical protein Rv3472 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1390 | - | 1e-64 | 59.78% (184) | hypothetical protein MAV_1390 |
M. smegmatis MC2 155 | MSMEG_6624 | - | 2e-88 | 80.00% (185) | hypothetical protein MSMEG_6624 |
M. thermoresistible (build 8) | TH_1622 | - | 4e-91 | 79.46% (185) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4267 | - | 3e-06 | 28.46% (130) | hypothetical protein Mvan_4267 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1268|M.gilvum_PYR-GCK MTDAD-ELNQLRKRVQYLEDRTAVLDCVMKQARGHDRHDAELMGSVYFED MSMEG_6624|M.smegmatis_MC2_155 MSSDD-EIKQLRERLQYVEDRMAILDCVMNQARGHDRHDVELMTSVYFED TH_1622|M.thermoresistible__bu MTNSD-ELEQLRRRVQYLEDRAAILDCVMNQARGHDRHDADLMSGVYWED MAV_1390|M.avium_104 MTSTDIDLEALRRDLQYVKDKIEIRDLIHTQARGHDRHDVSLMTSVYTED Mb3501|M.bovis_AF2122/97 ----------MRPVDEQWIEILRIQALCARYCLTIDTQDGEGWAGCFTED Rv3472|M.tuberculosis_H37Rv ----------MRPVDEQWIEILRIQALCARYCLTIDTQDGEGWAGCFTED Mvan_4267|M.vanbaalenii_PYR-1 ---------------MTRDDRQEISDVLVRYATGIDTRDWPLFRTVFTDD : : . * :* : :* Mflv_1268|M.gilvum_PYR-GCK G-IDEHGPNVKTGPEYGDWANEAHTAVFEDHLHNVTTHTCEIDGDVAHAE MSMEG_6624|M.smegmatis_MC2_155 G-VDEHGPVIKTGPEYGEYMNGQHEAVFEDHLHNITTHTCEINGDEAHAE TH_1622|M.thermoresistible__bu G-VDEHGPTVKSGPEYGEWANAAHSAVFEDHLHNITTHTCEIDGDEAHAE MAV_1390|M.avium_104 G-VDEHGPTVKAAADYGDWANAAHSAAFDQHSHNITTHTCEIEGDVAHSE Mb3501|M.bovis_AF2122/97 GAFEFDGWVIRGRPALREYADAHARVVRGRHLT--TDLLYEVDGDVATGR Rv3472|M.tuberculosis_H37Rv GAFEFDGWVIRGRPALREYADAHARVVRGRHLT--TDLLYEVDGDVATGR Mvan_4267|M.vanbaalenii_PYR-1 CELDYGEIGTWRGVDAVVEFMTATHEMAGYTLHRITNQAATVDGDTATAR .: * ::** * .. Mflv_1268|M.gilvum_PYR-GCK SYVMGAMRVKGGKIVSLMGGRYLDRLERRDGVWKIALRRCTIEWMISGDS MSMEG_6624|M.smegmatis_MC2_155 SYVMGAMRVKGGKIVSLMGGRYLDRLERRNGVWKIALRRCTIEWMISGDS TH_1622|M.thermoresistible__bu SYVIGAMRARGGKVVSLMGGRYLDRLERRDGVWKIAVRRCTIEWMMSGDS MAV_1390|M.avium_104 SYVI--VQARRGNALIMMGGRYIDRLERRDGTWKIALRRCTVEWTLQGDG Mb3501|M.bovis_AF2122/97 SASVVTLATAAG-YKILGSGEYQDRLIKQDGQWRIAYRRLRNDRLVSDPS Rv3472|M.tuberculosis_H37Rv SASVVTLATAAG-YKILGSGEYQDRLIKQDGQWRIAYRRLRNDRLVSDPS Mvan_4267|M.vanbaalenii_PYR-1 AYIDALIMSQDNTSGVSAVGFYDDELVRTDTGWRIRRRTFTPVLMRTI-- : : . * * *.* : : *:* * Mflv_1268|M.gilvum_PYR-GCK SILGKGAVKGFIKGQWDKTDASYLRPLKLD-DPVDRW MSMEG_6624|M.smegmatis_MC2_155 SVLGSGAVQGFIKGTWDRTDPSYARPLHLDTEPVNRW TH_1622|M.thermoresistible__bu SMLNSGAVQGFIKGKWDKSDASYIRPLQLESAPVERW MAV_1390|M.avium_104 SALKSGNFAGFIKGSWDTNDVSYARPLTQDDTNIERW Mb3501|M.bovis_AF2122/97 VAVN---VADADVAAVVGHLLAAARRLGTQMSDT--- Rv3472|M.tuberculosis_H37Rv VAVN---VADADVAAVVGHLLAAARRLGTQMSDT--- Mvan_4267|M.vanbaalenii_PYR-1 -------------------------------------