For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TSTDIDLEALRRDLQYVKDKIEIRDLIHTQARGHDRHDVSLMTSVYTEDGVDEHGPTVKAAADYGDWANA AHSAAFDQHSHNITTHTCEIEGDVAHSESYVIVQARRGNALIMMGGRYIDRLERRDGTWKIALRRCTVEW TLQGDGSALKSGNFAGFIKGSWDTNDVSYARPLTQDDTNIERW*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1390 | - | - | 100% (184) | hypothetical protein MAV_1390 |
| M. avium 104 | MAV_5237 | - | 3e-09 | 31.16% (138) | hypothetical protein MAV_5237 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3501 | - | 4e-06 | 33.01% (103) | hypothetical protein Mb3501 |
| M. gilvum PYR-GCK | Mflv_1268 | - | 1e-64 | 59.78% (184) | hypothetical protein Mflv_1268 |
| M. tuberculosis H37Rv | Rv3472 | - | 4e-06 | 33.01% (103) | hypothetical protein Rv3472 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6624 | - | 3e-64 | 59.24% (184) | hypothetical protein MSMEG_6624 |
| M. thermoresistible (build 8) | TH_1622 | - | 4e-69 | 62.90% (186) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4267 | - | 6e-07 | 27.64% (123) | hypothetical protein Mvan_4267 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1268|M.gilvum_PYR-GCK MTDAD-ELNQLRKRVQYLEDRTAVLDCVMKQARGHDRHDAELMGSVYFED
MSMEG_6624|M.smegmatis_MC2_155 MSSDD-EIKQLRERLQYVEDRMAILDCVMNQARGHDRHDVELMTSVYFED
TH_1622|M.thermoresistible__bu MTNSD-ELEQLRRRVQYLEDRAAILDCVMNQARGHDRHDADLMSGVYWED
MAV_1390|M.avium_104 MTSTDIDLEALRRDLQYVKDKIEIRDLIHTQARGHDRHDVSLMTSVYTED
Mb3501|M.bovis_AF2122/97 ----------MRPVDEQWIEILRIQALCARYCLTIDTQDGEGWAGCFTED
Rv3472|M.tuberculosis_H37Rv ----------MRPVDEQWIEILRIQALCARYCLTIDTQDGEGWAGCFTED
Mvan_4267|M.vanbaalenii_PYR-1 ---------------MTRDDRQEISDVLVRYATGIDTRDWPLFRTVFTDD
: : . * :* : :*
Mflv_1268|M.gilvum_PYR-GCK G-IDEHGPNVKTGPEYGDWANEAHTAVFEDHLHNVTTHTCEIDGDVAHAE
MSMEG_6624|M.smegmatis_MC2_155 G-VDEHGPVIKTGPEYGEYMNGQHEAVFEDHLHNITTHTCEINGDEAHAE
TH_1622|M.thermoresistible__bu G-VDEHGPTVKSGPEYGEWANAAHSAVFEDHLHNITTHTCEIDGDEAHAE
MAV_1390|M.avium_104 G-VDEHGPTVKAAADYGDWANAAHSAAFDQHSHNITTHTCEIEGDVAHSE
Mb3501|M.bovis_AF2122/97 GAFEFDGWVIRGRPALREYADAHARVVRGRHLT--TDLLYEVDGDVATGR
Rv3472|M.tuberculosis_H37Rv GAFEFDGWVIRGRPALREYADAHARVVRGRHLT--TDLLYEVDGDVATGR
Mvan_4267|M.vanbaalenii_PYR-1 CELDYGEIGTWRGVDAVVEFMTATHEMAGYTLHRITNQAATVDGDTATAR
.: * ::** * ..
Mflv_1268|M.gilvum_PYR-GCK SYVMGAMRVKGGKIVSLMGGRYLDRLERRDGVWKIALRRCTIEWMISGDS
MSMEG_6624|M.smegmatis_MC2_155 SYVMGAMRVKGGKIVSLMGGRYLDRLERRNGVWKIALRRCTIEWMISGDS
TH_1622|M.thermoresistible__bu SYVIGAMRARGGKVVSLMGGRYLDRLERRDGVWKIAVRRCTIEWMMSGDS
MAV_1390|M.avium_104 SYVI--VQARRGNALIMMGGRYIDRLERRDGTWKIALRRCTVEWTLQGDG
Mb3501|M.bovis_AF2122/97 SASVVTLATAAG-YKILGSGEYQDRLIKQDGQWRIAYRRLRNDRLVSDPS
Rv3472|M.tuberculosis_H37Rv SASVVTLATAAG-YKILGSGEYQDRLIKQDGQWRIAYRRLRNDRLVSDPS
Mvan_4267|M.vanbaalenii_PYR-1 AYIDALIMSQDNTSGVSAVGFYDDELVRTDTGWRIRRRTFTPVLMRTI--
: : . * * *.* : : *:* *
Mflv_1268|M.gilvum_PYR-GCK SILGKGAVKGFIKGQWDKTDASYLRPLKLD-DPVDRW
MSMEG_6624|M.smegmatis_MC2_155 SVLGSGAVQGFIKGTWDRTDPSYARPLHLDTEPVNRW
TH_1622|M.thermoresistible__bu SMLNSGAVQGFIKGKWDKSDASYIRPLQLESAPVERW
MAV_1390|M.avium_104 SALKSGNFAGFIKGSWDTNDVSYARPLTQDDTNIERW
Mb3501|M.bovis_AF2122/97 VAVN---VADADVAAVVGHLLAAARRLGTQMSDT---
Rv3472|M.tuberculosis_H37Rv VAVN---VADADVAAVVGHLLAAARRLGTQMSDT---
Mvan_4267|M.vanbaalenii_PYR-1 -------------------------------------