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M. gilvum PYR-GCK Mflv_1196 (-)

annotation: cytochrome-c oxidase
coordinates: 1253218 - 1254996
length: 592

VSSSGLTAEMTAESSVDKLPALTPRRPFPARVGPKGNLIYKLITTTDHKLIGIMYVVTCFVFFLIGGIMA
LFIRTELAMPGLQFLSNEQYNQLFTMHGTAMLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNALSFWLF
LFGALIALAGFITPGGAADFGWTAYSPLSDAIHSPGVGVDLWIFGLGVGGLGTILGAVNMVTTVVCMRAP
GMTMFRMPIFTWNILVTSILVLLIFPLLTAALFGLAADRHLGAHVYDPANGGVILWQHLFWYFGHPEVYV
IALPFFGIISEVIPVFSRKPIFGYTTLVYATFSIAALSMAVWAHHMFATGAVLLPFFSFMTFLIAVPTGI
KFFNWIGTMWKGQLTFETPMLFSVGFILTFLLGGLSGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFA
TYAGVYFWFPKMTGRLLDERLGKLHFWLTFIGFHLTFLVQHWLGDEGMPRRYADYLPTDGFTTLNGISTI
GAFMLGASMLPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPH
MRERMRAEAHAGRSHGPDDGDVTRLDEENVRT
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_1196--100% (592)cytochrome-c oxidase
M. gilvum PYR-GCKMflv_4277-0.090.89% (571) cytochrome-c oxidase
M. gilvum PYR-GCKMflv_2818-0.090.37% (571) cytochrome-c oxidase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3069cctaD0.087.28% (566) cytochrome C oxidase polypeptide I
M. tuberculosis H37RvRv3043cctaD0.087.28% (566) cytochrome C oxidase polypeptide I
M. leprae Br4923MLBr_01728-0.086.32% (570) cytochrome C oxidase, polypeptide I
M. abscessus ATCC 19977MAB_3389c-0.086.22% (566) cytochrome c oxidase polypeptide I
M. marinum MMMAR_1651ctaD0.088.16% (566) cytochrome C oxidase polypeptide I CtaD
M. avium 104MAV_3908ctaD0.087.66% (543) cytochrome c oxidase, subunit I
M. smegmatis MC2 155MSMEG_4437ctaD0.086.13% (555) cytochrome c oxidase, subunit I
M. thermoresistible (build 8)TH_1815ctaD1e-17185.27% (319) PROBABLE CYTOCHROME C OXIDASE POLYPEPTIDE I CTAD (CYTOCHROME
M. ulcerans Agy99MUL_1887ctaD0.087.81% (566) cytochrome C oxidase polypeptide I CtaD
M. vanbaalenii PYR-1Mvan_5610-0.094.18% (584) cytochrome-c oxidase

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1196|M.gilvum_PYR-GCK          MSSSGLTAEMTAESSVDKLPALTPRRPFPARVGPKGNLIYKLITTTDHKL
Mvan_5610|M.vanbaalenii_PYR-1       ---------MTAESTVEKPTTLVPKRPFPARLGPKGNLIYKLITTTDHKL
MAV_3908|M.avium_104                -------------------------------------------------M
Mb3069c|M.bovis_AF2122/97           ---------MTAEAPP--LGELEAIRPYPARTGPKGSLVYKLITTTDHKM
Rv3043c|M.tuberculosis_H37Rv        ---------MTAEAPP--LGELEAIRPYPARTGPKGSLVYKLITTTDHKM
MLBr_01728|M.leprae_Br4923          ---------MTAEALS--SGELKAIRPYPARTGPKGNLVYKLITTTDHKM
MMAR_1651|M.marinum_M               ---------MTAEAPP--LGELEAIRPYPARTGPKGNLVYKLLTTTDHKL
MUL_1887|M.ulcerans_Agy99           ---------MTAEAPP--LGELEAIRPYPARTGPKGNLVYKLLTTTDHKL
MAB_3389c|M.abscessus_ATCC_199      ---------MTAEAPP--IGGLQASRPFPPRMGARGTLIYRLITTTDHKL
MSMEG_4437|M.smegmatis_MC2_155      ---------MTTHAPS--AGELLARRPFPQRLGPRWTLLYKLVTTTDHKL
TH_1815|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mflv_1196|M.gilvum_PYR-GCK          IGIMYVVTCFVFFLIGGIMALFIRTELAMPGLQFLSNEQYNQLFTMHGTA
Mvan_5610|M.vanbaalenii_PYR-1       IGIMYVVTCFVFFLIGGIMALFIRTELAVPGLQFLSNEQYNQLFTMHGTA
MAV_3908|M.avium_104                IGIMYTVTCFAFFFIGGLMALLMRTELAAPGLQFLSNEQFNQLFTMHGTI
Mb3069c|M.bovis_AF2122/97           IGIMYCVACISFFFIGGLLALLMRTELAAPGLQFLSNEQFNQLFTMHGTI
Rv3043c|M.tuberculosis_H37Rv        IGIMYCVACISFFFIGGLLALLMRTELAAPGLQFLSNEQFNQLFTMHGTI
MLBr_01728|M.leprae_Br4923          IGIMYCVACFIFFFVGGLLALLMRTELAAPGLQFLSNEQFNQLFTMHGTI
MMAR_1651|M.marinum_M               IGIMYVVTCFIFFLIGGLLALLMRTELATPGLQFLSNEQFNQLFTMHGTV
MUL_1887|M.ulcerans_Agy99           IGIMYVVTCFIFFLIGGLLALLMRTELATPGLQFLSNEQFNQLFTMHGTV
MAB_3389c|M.abscessus_ATCC_199      IGIMYLVACFAFFLIGGLMALFMRAELAVPGLQFLSNEQFNQLFTMHGTV
MSMEG_4437|M.smegmatis_MC2_155      IGMMYVVACFIFFFIGGLMALLLRTELAVPGLQFLSNEQYNQLFTMHGTV
TH_1815|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mflv_1196|M.gilvum_PYR-GCK          MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNALSFWLFLFGALIALAG
Mvan_5610|M.vanbaalenii_PYR-1       MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGALIALSG
MAV_3908|M.avium_104                MLLLYATPVVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGGLIAASG
Mb3069c|M.bovis_AF2122/97           MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFVFGATIGAAG
Rv3043c|M.tuberculosis_H37Rv        MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFVFGATIGAAG
MLBr_01728|M.leprae_Br4923          MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGAAIGMAG
MMAR_1651|M.marinum_M               MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGATLGMAG
MUL_1887|M.ulcerans_Agy99           MLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGATLGMAG
MAB_3389c|M.abscessus_ATCC_199      MLLFYATPIVFGFANVVLPLQIGAPDVAFPRLNAFSFWLFLFGALIGIAG
MSMEG_4437|M.smegmatis_MC2_155      MLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFLFGASIALGG
TH_1815|M.thermoresistible__bu      ------------------------------------------------VG
                                                                                     *

Mflv_1196|M.gilvum_PYR-GCK          FITPGGAADFGWTAYSPLSDAIHSPGVGVDLWIFGLGVGGLGTILGAVNM
Mvan_5610|M.vanbaalenii_PYR-1       FITPGGAADFGWTAYTPLSDAMYSPGAGGDLWIFGLGVGGLGTILGAVNM
MAV_3908|M.avium_104                FIVPGGAADFGWTAYTPLSDAVHSPGAGGDLWITGLIVAGLGTILGAVNM
Mb3069c|M.bovis_AF2122/97           FITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGLGTILGAVNM
Rv3043c|M.tuberculosis_H37Rv        FITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGLGTILGAVNM
MLBr_01728|M.leprae_Br4923          FITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGLIVAGLGTILGAVNM
MMAR_1651|M.marinum_M               FITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGIAVGGLGTILGAVNM
MUL_1887|M.ulcerans_Agy99           FITPGGAADFGWTAYTPLTDAIHSPGVGGDLWIMGIAVGGLGTILGAVNM
MAB_3389c|M.abscessus_ATCC_199      FITPGGAADFGWTAYTPLTDAIHSPGAGADLWIMGLAVGGLGTILGAVNM
MSMEG_4437|M.smegmatis_MC2_155      FLAPGGPADFGWTAYTPLSNAMHSPGAGGDLWIFGLIVGGLGTILGAVNM
TH_1815|M.thermoresistible__bu      RIR----ADLCWDR------AMRSR---------------------YVPY
                                     :     **: *        *: *                       *  

Mflv_1196|M.gilvum_PYR-GCK          VTTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFGLAADRH
Mvan_5610|M.vanbaalenii_PYR-1       ITTVVCMRAPGMTMFRMPIFTWNILVTSILVLLIFPLLTAALFGLAADRH
MAV_3908|M.avium_104                ITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRH
Mb3069c|M.bovis_AF2122/97           ITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRH
Rv3043c|M.tuberculosis_H37Rv        ITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRH
MLBr_01728|M.leprae_Br4923          ITTVVCLRAPGMTMFRMPIFTWNILVTSILVLIAFPLLTAALFGLAADRH
MMAR_1651|M.marinum_M               ITTVVCMRAPGMTMFRMPIFTWNILVTSILVLIAFPLLTAALFGLAADRH
MUL_1887|M.ulcerans_Agy99           ITTVVCMRAPGMTMFRMSIFTWNILVTSILVLIAFPLLTAALFGLAADRH
MAB_3389c|M.abscessus_ATCC_199      ITTVVCMRAPGMTMFRMPIFTWNILVTSVLVLLAFPLLTAALFGLAADRH
MSMEG_4437|M.smegmatis_MC2_155      ITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRN
TH_1815|M.thermoresistible__bu      ATTPARLLAQLLSDIVIALW------IAVWVLVGMAVHTA----VSTIAE
                                     ** . : *  :  : :.::       :: :*: :.: *:    :::  .

Mflv_1196|M.gilvum_PYR-GCK          LGAHVYDPANGGVILWQHLFWYFGHPEVYVIALPFFGIISEVIPVFSRKP
Mvan_5610|M.vanbaalenii_PYR-1       LGAHVYDPANGGVLLWQHLFWYFGHPEVYVIALPFFGIISEVIPVFSRKP
MAV_3908|M.avium_104                LGAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKP
Mb3069c|M.bovis_AF2122/97           LGAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKP
Rv3043c|M.tuberculosis_H37Rv        LGAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKP
MLBr_01728|M.leprae_Br4923          LGAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKP
MMAR_1651|M.marinum_M               LGAHIYDPANGGVLLWQHLFWFFGHPEVYILALPFFGVVSEIFPVFSRKP
MUL_1887|M.ulcerans_Agy99           LGAHIYDPANGGVLLWQHLFWFFGHPEVYILALPFFGVVSEIFPVFSRKP
MAB_3389c|M.abscessus_ATCC_199      LGAHVFDPANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKP
MSMEG_4437|M.smegmatis_MC2_155      LGAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKP
TH_1815|M.thermoresistible__bu      VGRNVHTGATG-------------VSEXXXVALPFFGIVTEIFPVFSRKP
                                    :* ::.  *.*              .*   :******:::*::***:***

Mflv_1196|M.gilvum_PYR-GCK          IFGYTTLVYATFSIAALSMAVWAHHMFATGAVLLPFFSFMTFLIAVPTGI
Mvan_5610|M.vanbaalenii_PYR-1       IFGYTTLIYATFSIGALSMAVWAHHMFATGAVLYPFFSFMTFLIAVPTGI
MAV_3908|M.avium_104                VFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGI
Mb3069c|M.bovis_AF2122/97           IFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGI
Rv3043c|M.tuberculosis_H37Rv        IFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGI
MLBr_01728|M.leprae_Br4923          IFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGI
MMAR_1651|M.marinum_M               IFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGI
MUL_1887|M.ulcerans_Agy99           IFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTFLIAVPTGI
MAB_3389c|M.abscessus_ATCC_199      IFGYTTLIYATLGIAALSIAVWAHHMYATGAVLLPFFSFMTFLIAVPTGI
MSMEG_4437|M.smegmatis_MC2_155      VFGYTTLVYATISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGI
TH_1815|M.thermoresistible__bu      VFGYTALVYATVGIGALSMAVWAHHMFATGAVLLPFFAFTTYLIAVPTGI
                                    :****:*:***..*.***:******::****** ***:* *::*******

Mflv_1196|M.gilvum_PYR-GCK          KFFNWIGTMWKGQLTFETPMLFSVGFILTFLLGGLSGVLLASPPLDFHVT
Mvan_5610|M.vanbaalenii_PYR-1       KFFNWLGTMWKGQLTFETPMLFSVGFIATFLLGGLSGVLLASPPLDFHVH
MAV_3908|M.avium_104                KFFNWIGTMWKGQLTFETPMLFCVGFLLTFLLGGLTGVMLASPPLDFHVT
Mb3069c|M.bovis_AF2122/97           KFFNWIGTMWKGQLTFETPMLFSVGFMVTFLLGGLTGVLLASPPLDFHVT
Rv3043c|M.tuberculosis_H37Rv        KFFNWIGTMWKGQLTFETPMLFSVGFMVTFLLGGLTGVLLASPPLDFHVT
MLBr_01728|M.leprae_Br4923          KFFNWVGTMWKGQLTFETPMLFSVGFAVTFLLGGLTGVLLASPPLDFHVT
MMAR_1651|M.marinum_M               KFFNWVGTMWKGQLTFETPMLFSVGFAVTFLLGGLSGVLLASPPLDFHVT
MUL_1887|M.ulcerans_Agy99           KFFNWVGTMWKGQLTFETPMLFSVGFAVTFLLGGLSGVLLASPPLNFHVT
MAB_3389c|M.abscessus_ATCC_199      KFFNWIGTMWKGQLTFETPMIFSVGFLVTFLFGGLTGVLLAMPPVDFHVT
MSMEG_4437|M.smegmatis_MC2_155      KFVNWIGTMWKGQLTFETPMLFSVGFLVTFLLGGLTGVILASPPLDFHVT
TH_1815|M.thermoresistible__bu      KFFNWIGTMWKGQLTFESPMLFSVGFILTFLIGGLSGVMLASPPLDFHVT
                                    **.**:***********:**:*.***  ***:***:**:** **::*** 

Mflv_1196|M.gilvum_PYR-GCK          DSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDERLGKLHFWLTF
Mvan_5610|M.vanbaalenii_PYR-1       DSYFVVAHFHYVLFGTIVFATYAGIYFWFPKMTGRLLDERLGKLHFWLTF
MAV_3908|M.avium_104                DTYFVVAHFHYVLFGTIVFATFAGVYFWFPKMTGRLLDERLGKLHFWLTF
Mb3069c|M.bovis_AF2122/97           DSYFVVAHFHYVLFGTIVFATFAGIYFWFPKMTGRLLDERLGKLHFWLTF
Rv3043c|M.tuberculosis_H37Rv        DSYFVVAHFHYVLFGTIVFATFAGIYFWFPKMTGRLLDERLGKLHFWLTF
MLBr_01728|M.leprae_Br4923          DSYFVVAHFHYVLFGTIVFSTFAGIYFWFPKMTGRLLDEQLGKLHFWLTF
MMAR_1651|M.marinum_M               DSYFVVAHFHYVLFGTIVFSTFAGIYFWFPKMTGRLLDERLGKLHFWLTF
MUL_1887|M.ulcerans_Agy99           DSYFVVAHFHYVLFGTIVFSTFAGIYFWFPKMTGRLLDERLGKLHFWLTF
MAB_3389c|M.abscessus_ATCC_199      DSYFVIAHFHYVLFGTIVFATYAGIYFWFPKMTGRLLDERLGKFHFWLTF
MSMEG_4437|M.smegmatis_MC2_155      DSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRLGKLHFWLTL
TH_1815|M.thermoresistible__bu      DTYFLVAHFHYVLFGTIVFATFAGVYFWFPKMTGRMLDERLAKLHFWLTF
                                    *:**::*************:*:**:**********:**::*.*:*****:

Mflv_1196|M.gilvum_PYR-GCK          IGFHLTFLVQHWLGDEGMPRRYADYLPTDGFTTLNGISTIGAFMLGASML
Mvan_5610|M.vanbaalenii_PYR-1       IGFHTTFLVQHWLGDEGMPRRYADYLPTDGFTTLNVISTIGAFILGASML
MAV_3908|M.avium_104                IGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVGAFILGASMF
Mb3069c|M.bovis_AF2122/97           IGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIGAFILGASMF
Rv3043c|M.tuberculosis_H37Rv        IGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIGAFILGASMF
MLBr_01728|M.leprae_Br4923          IGFHTTFLVQHWLGDMGMPRRYADYLPTDGFQGLNVVSTIGSFILGASMF
MMAR_1651|M.marinum_M               IGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNIVSTIGAFILGVAMI
MUL_1887|M.ulcerans_Agy99           IGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNIVSTIGAFILGVAMF
MAB_3389c|M.abscessus_ATCC_199      IGFHSTFLVQHWLGNQGMPRRYADYLPTDGFTFLNSFSTVGAFILGASTL
MSMEG_4437|M.smegmatis_MC2_155      IGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIGSFILGVSML
TH_1815|M.thermoresistible__bu      IGFHTTFLVQHWLGNEGMPRRYADYLPTDGFTELNIVSSVGAFILGASML
                                    **** ****:****  ***********:***   *  *::*:*:**.: :

Mflv_1196|M.gilvum_PYR-GCK          PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
Mvan_5610|M.vanbaalenii_PYR-1       PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
MAV_3908|M.avium_104                PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
Mb3069c|M.bovis_AF2122/97           PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
Rv3043c|M.tuberculosis_H37Rv        PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
MLBr_01728|M.leprae_Br4923          PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
MMAR_1651|M.marinum_M               PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
MUL_1887|M.ulcerans_Agy99           PFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
MAB_3389c|M.abscessus_ATCC_199      PFLWNVFKSYRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFSELPRIRSE
MSMEG_4437|M.smegmatis_MC2_155      PFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSE
TH_1815|M.thermoresistible__bu      PFIWNVFKSWRYGDPVTVDDPWGYGNSLEWATTCPPPRHNFYELPRIRSE
                                    **:******:***: *****************:******** ********

Mflv_1196|M.gilvum_PYR-GCK          RPAFELHYPHMRERMRAEAHAGRSHG-PDDGDVTRLDEENVRT-
Mvan_5610|M.vanbaalenii_PYR-1       RPAFELHYPHMVERMRAEAHAGRKHGGPAGGDVTRLDDENVRT-
MAV_3908|M.avium_104                RPAFELHYPHMVERLRAEAHVGRAHG-PADKDVTRLDDVQVRS-
Mb3069c|M.bovis_AF2122/97           RPAFELHYPHMVERLRAEAHVGRHHDEPAMVTSS----------
Rv3043c|M.tuberculosis_H37Rv        RPAFELHYPHMVERLRAEAHVGRHHDEPAMVTSS----------
MLBr_01728|M.leprae_Br4923          RPAFELHYPHMVERLRDEAYVGRRHAEELVEVSLH---------
MMAR_1651|M.marinum_M               RPAFELHYPHMVERLRAEAHVGRHHDELAKATSS----------
MUL_1887|M.ulcerans_Agy99           RPAFELHYPHMVERLRAEAHVGRHHDELAKATSS----------
MAB_3389c|M.abscessus_ATCC_199      RPAFELHYPHMSERMRAEAHVGGGH-------------------
MSMEG_4437|M.smegmatis_MC2_155      RPAFELHYPHMIERLRAESHPGRTQGGPGAVTLPQPQARSHPVE
TH_1815|M.thermoresistible__bu      RPAFELHYPHMIERMRAESHIGRSHG-PADGDVTRMEDTNVRT-
                                    *********** **:* *:: *  :