For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_1098 (-)

annotation: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
coordinates: 1144401 - 1144856
length: 151

MARKFATADHVALPDLLEFVRPRHRMVLTTFRSGGSPQSSPVTGGVDGEGRIVIATYPQRAKTANIRRHP
HASVVVLSDEFDGPYVQVDGAAEVVDLPDAVEPLVDYFRSIAGEHPDWDEYRQAMRDQGKCLIRVTPQQW
GPIATGGFPPR

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. gilvum PYR-GCK Mflv_1098 - - 100% (151) pyridoxamine 5'-phosphate oxidase-related, FMN-binding
M. gilvum PYR-GCK Mflv_2137 - 3e-14 41.23% (114) pyridoxamine 5'-phosphate oxidase-related, FMN-binding
M. gilvum PYR-GCK Mflv_2590 - 2e-07 30.71% (127) pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb1186 - 7e-15 38.94% (113) hypothetical protein Mb1186
M. tuberculosis H37Rv Rv1155 - 6e-14 38.05% (113) hypothetical protein Rv1155
M. leprae Br4923 MLBr_01508 - 2e-12 39.47% (114) hypothetical protein MLBr_01508
M. abscessus ATCC 19977 MAB_2595 - 6e-16 41.59% (113) putative pyridoxamine 5'-phosphate oxidase
M. marinum M MMAR_4298 - 3e-15 41.59% (113) hypothetical protein MMAR_4298
M. avium 104 MAV_1292 - 2e-15 39.82% (113) pyridoxamine 5'-phosphate oxidase family protein
M. smegmatis MC2 155 MSMEG_6485 - 1e-71 84.00% (150) ATP binding protein
M. thermoresistible (build 8) TH_0458 - 1e-15 41.23% (114) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99 MUL_0996 - 3e-15 43.81% (105) hypothetical protein MUL_0996
M. vanbaalenii PYR-1 Mvan_5719 - 2e-72 84.67% (150) pyridoxamine 5'-phosphate oxidase-related, FMN-binding

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_4298|M.marinum_M               ----------------MGRQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
MUL_0996|M.ulcerans_Agy99           ----------------MGRQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
MLBr_01508|M.leprae_Br4923          MRFGASLLRVRRRLYGMGSQVFDDKLLAVISGNSIGVLATIKRDGRPQLS
Mb1186|M.bovis_AF2122/97            ----------------MARQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
Rv1155|M.tuberculosis_H37Rv         ----------------MARQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
MAV_1292|M.avium_104                ----------------MGRQVFDDKLLAVISGNSLGVLATIKRDGRPQLS
TH_0458|M.thermoresistible__bu      ----------------MTRRVFDDKLLAVIAGNSLGVLATIKRDGRPQLS
MAB_2595|M.abscessus_ATCC_1997      ----------------MASDRFDP--HALITESRLGILATIKSSGLPQLS
MSMEG_6485|M.smegmatis_MC2_155      ----------MARKYATADPVNLDELLDFVRPRHRMVLTTFRADGSLQSS
Mvan_5719|M.vanbaalenii_PYR-1       ----------MARKLATADVVTLPQLLDFVRPRHRMVLTTYRADGSLQSS
Mflv_1098|M.gilvum_PYR-GCK          ----------MARKFATADHVALPDLLEFVRPRHRMVLTTFRSGGSPQSS
                                                                .:      :*:* : .*  * *

MMAR_4298|M.marinum_M               NVQYYFDARKLVVQVSITEPRAKTRNLRRDPRASILVDADDGW-SYAVAE
MUL_0996|M.ulcerans_Agy99           NVQYYFDARKLVVQVSITEPRAKTRNLRRDPRASILVDADDGR-SYAVAE
MLBr_01508|M.leprae_Br4923          NVQYHFDPRDLAVRVSITEPGVKTRNLRRDPRASILVDVDDGW-SYAVAE
Mb1186|M.bovis_AF2122/97            NVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGW-SYAVAE
Rv1155|M.tuberculosis_H37Rv         NVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGW-SYAVAE
MAV_1292|M.avium_104                NVQYHFDPRSLVIQVSITEPRAKTRNLRRDPRASILVDADDGW-SYAVAE
TH_0458|M.thermoresistible__bu      NVTYYFDPRRLTIQVSVTEPRAKTRNLRRDPRASIHVSSDDGW-SYAVAE
MAB_2595|M.abscessus_ATCC_1997      PVTPYYDRDNGIIYVSMTDGRAKTANLRRDPRAALECTSSDGR-AWATAE
MSMEG_6485|M.smegmatis_MC2_155      PVTGGVDAQG-RIVIATYPQRAKSANIRRTPRASVVVLSDEFNGPYVQVD
Mvan_5719|M.vanbaalenii_PYR-1       PVSGGVDAEG-RIVIATYPQRAKTANLRRRPRASVVVLSDEFDGPYVQVD
Mflv_1098|M.gilvum_PYR-GCK          PVTGGVDGEG-RIVIATYPQRAKTANIRRHPHASVVVLSDEFDGPYVQVD
                                     *    *     : ::     .*: *:** *:*::    .:   .:. .:

MMAR_4298|M.marinum_M               GTAELTPPAAAPDDETVEALIALYRNIAGEHPDWDEYREAMVTDRRVLLT
MUL_0996|M.ulcerans_Agy99           GTAELTPPAAAPDDETVEALIALYRNIAGEHPDWDEYREAMVIDRRVLLT
MLBr_01508|M.leprae_Br4923          GTAELTPPAAAPDDDTVEALIVLYRNIVGEHLDWDEYRQAMVTDRRVLLT
Mb1186|M.bovis_AF2122/97            GTAQLTPPAAAPDDDTVEALIALYRNIAGEHPDWDDYRQAMVTDRRVLLT
Rv1155|M.tuberculosis_H37Rv         GTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLT
MAV_1292|M.avium_104                GTAELTPPAAAPDDDTVQGLIALYRNIAGEHPDWDEYRQAMVTDRRVLLT
TH_0458|M.thermoresistible__bu      GTVTLTPEAADPYDDTVEGLIELYRNIAGEHPDWDDYRRAMVEDRRVLLT
MAB_2595|M.abscessus_ATCC_1997      GHVTLTGPGADPDGPEVQALVDYYRGAAGEHPDWDEYRSVMVSDRRVLMA
MSMEG_6485|M.smegmatis_MC2_155      GEAEVIGLP-----DAVEPLVEYFRVISGEHPDWDEYRQAMVDQGKCLIR
Mvan_5719|M.vanbaalenii_PYR-1       GDAEVVDLP-----EALEPLVEYFRSIAGEHPDWDEYRQAMVDQRKCLIR
Mflv_1098|M.gilvum_PYR-GCK          GAAEVVDLP-----DAVEPLVDYFRSIAGEHPDWDEYRQAMRDQGKCLIR
                                    * . :           :: *:  :*   *** ***:** .*  : : *: 

MMAR_4298|M.marinum_M               LPISHVYGLPPGKR---
MUL_0996|M.ulcerans_Agy99           LPISHVYGLPPGKR---
MLBr_01508|M.leprae_Br4923          LPILHVYGLPPGIR---
Mb1186|M.bovis_AF2122/97            LPISHVYGLPPGMR---
Rv1155|M.tuberculosis_H37Rv         LPISHVYGLPPGMR---
MAV_1292|M.avium_104                LPISHVYGMPPGMR---
TH_0458|M.thermoresistible__bu      MPISHVYGMPPGMR---
MAB_2595|M.abscessus_ATCC_1997      LRVERVYGQKLG-----
MSMEG_6485|M.smegmatis_MC2_155      VTPKQWGPVATGGFPPE
Mvan_5719|M.vanbaalenii_PYR-1       VTPRRWGPVATGGFPPG
Mflv_1098|M.gilvum_PYR-GCK          VTPQQWGPIATGGFPPR
                                    :   :      *

species	id	gene	e-value	identity (len)	annotation
M. gilvum PYR-GCK	Mflv_1098	-	-	100% (151)	pyridoxamine 5'-phosphate oxidase-related, FMN-binding
M. gilvum PYR-GCK	Mflv_2137	-	3e-14	41.23% (114)	pyridoxamine 5'-phosphate oxidase-related, FMN-binding
M. gilvum PYR-GCK	Mflv_2590	-	2e-07	30.71% (127)	pyridoxamine 5'-phosphate oxidase-related, FMN-binding