For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDERDDDTSRAVVRSLRTEDSYVVAGSVATQGSAVVAGSIATAGSAGVAGSIATARSAAVANSIATAGSA AVAQSIATAGSAAIANSILVVLSLACAKCLACLGCIACTSCKACVGCIDCEDCIGCVGCIDCSGLRGAVG LRGVHAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0396 | - | - | 100% (147) | hypothetical protein Mflv_0396 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1773c | - | 1e-36 | 54.92% (122) | hypothetical protein Mb1773c |
M. tuberculosis H37Rv | Rv1744c | - | 5e-37 | 55.74% (122) | hypothetical protein Rv1744c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4284c | - | 5e-09 | 41.79% (67) | hypothetical protein MAB_4284c |
M. marinum M | MMAR_3436 | - | 2e-05 | 44.74% (38) | hypothetical protein MMAR_3436 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0282 | - | 4e-63 | 81.63% (147) | hypothetical protein Mvan_0282 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 MSIIDFILNLFRDPVEAASYVADPEAALANAGLSAVSAAQVGAVMPVVAE MMAR_3436|M.marinum_M -------------------------------------------------- Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 SVASNYGYQSQWVNTGNPIHDLSGNLQNYYAAQPDGPSILSPSLLSPRDN MMAR_3436|M.marinum_M -------------------------------------------------- Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 DFLSHNDTDFASHNPIASGNQVMSPSGNVDSFNRGPLLDLSFGDLQFGNR MMAR_3436|M.marinum_M -------------------------------------------------- Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 DTTAIGDGAVAVGGSNSGPIASGQGSTAVNGDVRDSNIINADHGSNVGVD MMAR_3436|M.marinum_M ----------------------------------------------MFGI Mflv_0396|M.gilvum_PYR-GCK ------------------------MDERDDDTSRAVVRS----------- Mvan_0282|M.vanbaalenii_PYR-1 ------------------------MTQTDDGAERAVVGS----------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 QSQTRVGGDYTNVSGHGSADIDKSVTVVDDHSQRNTTNINDSFNTDRSTN MMAR_3436|M.marinum_M IRPCRHRLGRELTVAWRAQLCGLCLALRDDYGQAARIATN---------- Mflv_0396|M.gilvum_PYR-GCK ----------LRTEDSYVVAGSVATQGSAVVAGS----IATAGSAGVAGS Mvan_0282|M.vanbaalenii_PYR-1 ----------LRTQNSYVVAGSIATTDSAVVAGS----IATAGSAAVAGS Mb1773c|M.bovis_AF2122/97 ----------------MVINRSIASIDSIAVAGS----AATTGAVAVAGS Rv1744c|M.tuberculosis_H37Rv ----------------MVINRSIASIDSIAVAGS----AATTGAVAVAGS MAB_4284c|M.abscessus_ATCC_199 IGSGNTTNTEIGSHNQANIGTSTSAGGSAAVGGN----AGLAGNAGLAGN MMAR_3436|M.marinum_M ---YDGLVVSVLVEAQSVTPAPRRTAGPCPLRGMRRADVATGECARLAAV . : .. : * . . :*. Mflv_0396|M.gilvum_PYR-GCK IATARSAAVANSIATAGSAAVAQSIATAGSAAIAN--------------- Mvan_0282|M.vanbaalenii_PYR-1 IATAGSAAVARSIATAGSAAVAGSIATAGSAAIAG--------------- Mb1773c|M.bovis_AF2122/97 VATAGSVAVAGSVATAGSVAIAGAAATAGSVGIIG--------------- Rv1744c|M.tuberculosis_H37Rv VATAGSVAVAGSVATAGSVAIAGAAATAGSVGIIG--------------- MAB_4284c|M.abscessus_ATCC_199 AGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAG MMAR_3436|M.marinum_M VSLALAAARVRDHIEDRDGVVGAAPIRPTARRIAQRWVRQG--------- . * .. . . . :. . : Mflv_0396|M.gilvum_PYR-GCK -----------------------------------------------SIL Mvan_0282|M.vanbaalenii_PYR-1 -----------------------------------------------CIL Mb1773c|M.bovis_AF2122/97 -----------------------------------------------SLL Rv1744c|M.tuberculosis_H37Rv -----------------------------------------------SLL MAB_4284c|M.abscessus_ATCC_199 LAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLAGNAGLA MMAR_3436|M.marinum_M ----------------------------------------------TDAG Mflv_0396|M.gilvum_PYR-GCK VVLSLACAKCLACLGCIACTSCKACVGCIDCEDCIGCVGCIDCSGLRG-- Mvan_0282|M.vanbaalenii_PYR-1 VVLSIACRGCLACLGCIACIKCKACVGCIDCEDCIGCVGCVNCSGLRN-- Mb1773c|M.bovis_AF2122/97 TVLCVAVRQCVACLACITCTRCVACIGCVRCTDCVGCLWCVNCSGLRN-- Rv1744c|M.tuberculosis_H37Rv TVLCVAVRQCVACLACITCTRCVACIGCVRCTDCVGCLWCVNCSGLRN-- MAB_4284c|M.abscessus_ATCC_199 GNAGLAGNAGLAGNAAVAGNAAVAGNAAVAGNAAVGGVLNTGVSGAIGGS MMAR_3436|M.marinum_M NALGFDTNVLVAAMDRQADLEANAVAGSSLLLVTEPTETAVAAAFEHTAV . :* : . * .. : Mflv_0396|M.gilvum_PYR-GCK --AVGLRGVHAA-------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 --AVGLRNVHAA-------------------------------------- Mb1773c|M.bovis_AF2122/97 --VVGAQNLRVGNLGRVSN------------------------------- Rv1744c|M.tuberculosis_H37Rv --VVGARNLRVGNLGRVSN------------------------------- MAB_4284c|M.abscessus_ATCC_199 SHVGGAINESLGGSGSVGGSTAVGGGAHTGVGGGVSTGVGVGSHVGGGIS MMAR_3436|M.marinum_M LAQRPANQAPLREIGRLFGRIAHLLDAVADYHDDLARGKWNPLTATATSI Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 ESLGGSGSVGGSTAVGGGAHTGVGGGVSTGVGVGSHVGGGISESLGGSGS MMAR_3436|M.marinum_M AAVRPLCDDALLGIELALADVDFTDGRLARRLLTREVRHSVSRTFSQLGY Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 VGGSTAVGGGAHTGVGGGVNTGVGVGSHVGGGISESLGGSGSVGGSTAVG MMAR_3436|M.marinum_M PGYEATPHGRQEPINFGAQPMSAGPYPGLPGEPAPNPDQSPKRGCWNTCT Mflv_0396|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb1773c|M.bovis_AF2122/97 -------------------------------------------------- Rv1744c|M.tuberculosis_H37Rv -------------------------------------------------- MAB_4284c|M.abscessus_ATCC_199 GGAHTSAINDALGGSGSVGGSTAVGGGAHTSAINESMNSSINASHSSSMN MMAR_3436|M.marinum_M EDRCCDCTCDCCEGCCDDDCCCDCGDCADCCDCGDCCDCGDCCDCS---- Mflv_0396|M.gilvum_PYR-GCK ----------------------------------------- Mvan_0282|M.vanbaalenii_PYR-1 ----------------------------------------- Mb1773c|M.bovis_AF2122/97 ----------------------------------------- Rv1744c|M.tuberculosis_H37Rv ----------------------------------------- MAB_4284c|M.abscessus_ATCC_199 ESFGSSMGSHGAAGTGFEAQGHAQGHASETAHTTLPGAEHH MMAR_3436|M.marinum_M -----------------------------------------