For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RLRRGCSATGERARDNRCMAAAVTIRILGVGMGPQHVTPEVADALNGVDYVLAADKGEDDALLALRREIV RAHGGAEVLGLRDPARDRSDGLSTGAYESAVADWHDARAAQYADVLRRRGGTAAFLVWGDPSLYDSTIRV VEKVRDLLGPDTDVDFDVLPGISAPQLLAARHRIVLHEVGRPVHITTGRRLQEAVAAGLDNILAMLNPAP DRLDFTGLDDWTIWWGANLGAAGERLVAGRVGDVLPAIADARAAAHADDGWVMDAFLIRRTR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0361 | - | - | 100% (273) | precorrin 6A synthase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1037 | - | 8e-46 | 45.10% (255) | precorrin 6A synthase |
M. marinum M | MMAR_4563 | - | 2e-41 | 42.52% (254) | hypothetical protein MMAR_4563 |
M. avium 104 | MAV_1065 | cobF | 8e-46 | 44.02% (259) | precorrin 6A synthase |
M. smegmatis MC2 155 | MSMEG_5548 | cobF | 3e-44 | 43.70% (254) | precorrin 6A synthase |
M. thermoresistible (build 8) | TH_2324 | cobF | 8e-47 | 43.80% (258) | precorrin-6A synthase (deacetylating) |
M. ulcerans Agy99 | MUL_4422 | - | 1e-41 | 42.52% (254) | precorrin 6A synthase |
M. vanbaalenii PYR-1 | Mvan_0376 | - | 1e-120 | 82.68% (254) | precorrin 6A synthase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5548|M.smegmatis_MC2_155 ----------------------MRRIHVIGIGAGDPDYVTAQAVAALNDT TH_2324|M.thermoresistible__bu ---------------------VPRHIHVIGIGAGDPDYVTAQAVAALNDT MMAR_4563|M.marinum_M --------------------MVSRHIHVIGIGAGDPDYVTVQAINALNDT MUL_4422|M.ulcerans_Agy99 --------------------MVSRHIHVIGIGAGDPDYVTVQAINALNDT MAV_1065|M.avium_104 ---------------------MGRHIHVIGIGAGDPDYLTVQAIEALNDT MAB_1037|M.abscessus_ATCC_1997 ----------------------MRRIRVIGIGAGHPEYLTVQAIAALNEV Mflv_0361|M.gilvum_PYR-GCK MRLRRGCSATGERARDNRCMAAAVTIRILGVGMG-PQHVTPEVADALNGV Mvan_0376|M.vanbaalenii_PYR-1 -------------------MVAAVKVRILGVGMG-PQHVTPEVADALRTV ::::*:* * *:::* :. **. . MSMEG_5548|M.smegmatis_MC2_155 EVFFAMDKGQSKDELVALRRLICERFITEARYRFVELADPKRAE-----D TH_2324|M.thermoresistible__bu DVFFAMDKGEAKDDLVALRRQICERFIERPGYRFVELPDPPRAR-----D MMAR_4563|M.marinum_M QVFFAMDKGEAKSELVELRRAICARFIREPRYRFVELPDPKRAV-----D MUL_4422|M.ulcerans_Agy99 QVFFAMDKGEAKSELVELRRAICARFIREPRYRFVELPDPKRAV-----D MAV_1065|M.avium_104 QVFFAMDKGEQKSDLVALRREICSRFIRQPGYRFVELPDPKRSD-----R MAB_1037|M.abscessus_ATCC_1997 DVFFVADKGDIKDDLVELRRHICERYITDPDYRFVELPDPVRG------K Mflv_0361|M.gilvum_PYR-GCK DYVLAADKGE-DDALLALRREIVR---AHGGAEVLGLRDPARDRSDGLST Mvan_0376|M.vanbaalenii_PYR-1 DYVLAAEKAD-DDRLLALRRAIVR---AHGGAELVALPDPPRDRSERLSA : .:. :*.: .. *: *** * ..: * ** * MSMEG_5548|M.smegmatis_MC2_155 GDYRQIVADWHAERARIWARAIESELGPDGVGAFLAWGDPSLYDSTLRIL TH_2324|M.thermoresistible__bu GDYRQAVSDWHAARARIWADAIATELGPDGVGAFLAWGDPSLYDSTLRIL MMAR_4563|M.marinum_M AHYEDAVSQWHAQRARIWARAISTELGPGGVGAFLAWGDPSLYDSTLRIL MUL_4422|M.ulcerans_Agy99 AHYEDAVSQWHAQRARIWARAISTELGPGGVGAFLAWGDPSLYDSTLRIL MAV_1065|M.avium_104 ADYRDAVAEWHAARAQIWADAIAAELGPHGVGGFLAWGDPSLYDSTLRIL MAB_1037|M.abscessus_ATCC_1997 GEYRGAVTQWHAERAALWAKAIASDLPDGGTGAFLAWGDPSLYDSTLRIL Mflv_0361|M.gilvum_PYR-GCK GAYESAVADWHDARAAQYADVLR---RRGGTAAFLVWGDPSLYDSTIRVV Mvan_0376|M.vanbaalenii_PYR-1 GGYESAVSDWHDARAAQYAGVLK---ERGGTAAFLVWGDPSLYDSTIRVV . *. *::** ** :* .: *...**.**********:*:: MSMEG_5548|M.smegmatis_MC2_155 EM----VGEHVEFDYDVIPGVTAIQALTARHRIPLNDVGEPVLITTGRRL TH_2324|M.thermoresistible__bu DR----VAEHVEISYDVIPGITAIQALTARHRIPLNDVGEPVLITTGRRL MMAR_4563|M.marinum_M DA----VSAEVDFSYDVIPGITAVQALTARHRIPLNDVGAPVVITTGRQL MUL_4422|M.ulcerans_Agy99 DA----VSAEVDFSYDVIPGITAVQALTARHRIPLNDVGAPVVITTGRQL MAV_1065|M.avium_104 DT----VAGHVEFTFDVIPGITAVQALTARHRIPLNEVGEPVLVTTGRQL MAB_1037|M.abscessus_ATCC_1997 DAI--LVDDPAAFEYDVLPGITAISALTARHRIVLNGIGEPVLITTGRRL Mflv_0361|M.gilvum_PYR-GCK EKVRDLLGPDTDVDFDVLPGISAPQLLAARHRIVLHEVGRPVHITTGRRL Mvan_0376|M.vanbaalenii_PYR-1 EKVRALLEPHVALDFDVLPGISAPQLLAARHRIVLHEVGKPVHVTTGRRL : : . . :**:**::* . *:***** *: :* ** :****:* MSMEG_5548|M.smegmatis_MC2_155 R-EHGLTG--SAVVMLDA---DCSFRTCDPRTRIWWGAYLGTPDELLVAG TH_2324|M.thermoresistible__bu R-EHGLTG--AAVVMLDG---ECSFLTCPPQTRIWWGAYLGTPDELLLAG MMAR_4563|M.marinum_M R-ARQVAG--TAVVMLDA---DCSFRACPPQTRIWWGAYLGTEDELLVAG MUL_4422|M.ulcerans_Agy99 R-TRQVAG--TAVVMLDA---DCSFRACPTQTRIWWGAYLGTEDELLVAG MAV_1065|M.avium_104 R-AHGISG--SAVVMLDA---DCSFQRCAPETRIWWGAYLGTADELLVAG MAB_1037|M.abscessus_ATCC_1997 LDEWPRAG--TVVVMLDG---DCAFRQLDPSTQIWWGAYLGTEHELLVAG Mflv_0361|M.gilvum_PYR-GCK Q-EAVAAGLDNILAMLNPAPDRLDFTGLDDWT-IWWGANLGAAGERLVAG Mvan_0376|M.vanbaalenii_PYR-1 Q-EAVAAGMDNIVAMLNPPPERLDFTGLDDWT-IWWGANLGAPGERLVTG :* :.**: * * ***** **: * *::* MSMEG_5548|M.smegmatis_MC2_155 TVGDVAEDIVRMRAEARTRHGWIMDTYLLRSAD- TH_2324|M.thermoresistible__bu TVGAVGKRIETVRAEARARHGWIMDTYLLRP--- MMAR_4563|M.marinum_M TVGEVGERIAALRAEARARHGWIMDTYLIRTY-- MUL_4422|M.ulcerans_Agy99 TVGEVGERIAALRAEARARHGWIMDTYLIRTY-- MAV_1065|M.avium_104 TVGEVGPRIAALRAQARARHGWIMDTYLLRPAH- MAB_1037|M.abscessus_ATCC_1997 TVGEVGDRIAQVRTEARADHGWIMDTYLLRSVGA Mflv_0361|M.gilvum_PYR-GCK RVGDVLPAIADARAAAHADDGWVMDAFLIRRTR- Mvan_0376|M.vanbaalenii_PYR-1 RLRDVLPAVADARAAADAYDGWVMDVFLIRRDR- : * : *: * : .**:**.:*:*