For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRVAHSHSHTHSLSGPSPLGPLAAKVVVGLLVVIGVAVMIGAALLWPDGQKSDIPLPFQNAAGGAVTTES GHVLSSVAATCGSPSAGSVLTSAPLPAEGGGAECVQSLVSIDSGPNEGADTLLEIGVGPGQPSLAVGDDV RLSRQVDDAGTTTYAFYDFERTWPLTAFALVFAIVIVAVARWRGLRALVGIVIAFGVLVVFLLPALRDGA PAVPVALVASAAILYAVLYLAHGVSLRTSAALLGTLASLLLAAGLSWAAIEFTHITGLSEDQNNEVAAYL GNVSITGMLLAGFIIGSLGVLNDVTVTQASTAFELAAVGDGATRRQVFVGAMRVGRDHIASTVYTLVLAY AGSALPLLLLFSVANRSLGDVLTSESVAIEVARSAVGGIALALSVPLTTGIAAMLATPQQRRH
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0281 | - | - | 100% (413) | YibE/F family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1599 | - | 1e-153 | 70.76% (383) | hypothetical protein MAB_1599 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_4819 | - | 1e-164 | 73.04% (408) | hypothetical protein MAV_4819 |
| M. smegmatis MC2 155 | MSMEG_0687 | - | 0.0 | 81.28% (406) | hypothetical protein MSMEG_0687 |
| M. thermoresistible (build 8) | TH_0765 | - | 1e-174 | 77.56% (410) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0617 | - | 0.0 | 87.35% (411) | YibE/F family protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0281|M.gilvum_PYR-GCK MRVAHSHSHTHSLSGPSPLGPLAAKVVVGLLVVIGVAVMIGAALLWPDGQ
Mvan_0617|M.vanbaalenii_PYR-1 --MTHTHSHSHSLNGPSPLGPLAARIVVGLLVAIGVATLIGAALLWPSGG
TH_0765|M.thermoresistible__bu --VTHSHSHSH--TGPAPLGPPAARLVVAALVLIALATVAGAVLLWPSGE
MSMEG_0687|M.smegmatis_MC2_155 --MAHSHSHSHSLSGPSPLGPLAARIVVGLLVAIGVVVIVGAALLWPSRQ
MAV_4819|M.avium_104 --MTHSHSHGLP-SGPAPIDRLPARIVVGLLIAIGVAVAVGAIVLWPSRQ
MAB_1599|M.abscessus_ATCC_1997 -----------------------------MLAAMGIAVLVGLVALWPEHR
* :.:.. * ***.
Mflv_0281|M.gilvum_PYR-GCK KSDIPLPFQNAAGGAVTTESGHVLSSVAATCGSPSAGSVLTSAPLPAEGG
Mvan_0617|M.vanbaalenii_PYR-1 KADIPLPFQNAAGGAVTTESGHVLSSSAAVCGSPSVGAVLTSAPVPAEGE
TH_0765|M.thermoresistible__bu KAEIPLPFQDATGGAVTTEAGRVLSSTLATCGSPSVGAVLTTTPLPAPGD
MSMEG_0687|M.smegmatis_MC2_155 KVDIPLPYQNAAGGAVTTETGHVLSSTLTACGSPSVGAVLTSDPVSSPGD
MAV_4819|M.avium_104 HVDIPMPLQNAAGGAVSTQAGHVLSSGLGDCGSPSVSQVLTGPPQPALPG
MAB_1599|M.abscessus_ATCC_1997 TVDIPLPYQNAHGGAVTTESGTVLATRLGECGSPSTGQVLTADPAAGQTP
:**:* *:* ****:*::* **:: *****.. *** * ..
Mflv_0281|M.gilvum_PYR-GCK GAECVQSLVSIDSGPNEGADTLLEIGVGPGQPSLAVGDDVRLSRQVD-DA
Mvan_0617|M.vanbaalenii_PYR-1 GAACVQALVAIDSGPNQGANTLLEFSGGPGQPSLAVGDDIRVSRQVD-DV
TH_0765|M.thermoresistible__bu GGQCVQNLIAIESGPNSGARTVLEFSGGPGQPELAPGDEIRISRQVDGDT
MSMEG_0687|M.smegmatis_MC2_155 AGQCVQNLVAIDSGPNKGARTLLEFSGGPGQPNLVAGDDVRLSRQVD-AS
MAV_4819|M.avium_104 AGRCVLTQVAIDSGPNAGAATLLESSPGPGQPKFAVGDRIRIVRQVD-DQ
MAB_1599|M.abscessus_ATCC_1997 DSACALDLIAITSGPNSGAKTQLEFTAGGGQPTLAAGEHIRITRQVD-AQ
. *. ::* **** ** * ** * *** :. *: :*: ****
Mflv_0281|M.gilvum_PYR-GCK GTTTYAFYDFERTWPLTAFALVFAIVIVAVARWRGLRALVGIVIAFGVLV
Mvan_0617|M.vanbaalenii_PYR-1 GSTTYAFYDFERAWPLTVLAAVFAIVIVAVARWRGLRALVGIVIAFGVLV
TH_0765|M.thermoresistible__bu GVTTYAFYDYARGLPLAVLAAAFAVVIVAVARWRGLRALLGIVIAFGVLV
MSMEG_0687|M.smegmatis_MC2_155 GATSYAFYDYERTWPLIALAAVFAVVVVAVARWRGLRALIGIVVAFGVLV
MAV_4819|M.avium_104 GATSYAFYDFERGWALVGLAVAFAVVIVAVARWRGLLALVGILVAFVVLV
MAB_1599|M.abscessus_ATCC_1997 GATSYSFYDYERTWPLIAVAAAFAIVICLVARWRGLRALVGILVAFLVLA
* *:*:***: * .* .* .**:*: ******* **:**::** **.
Mflv_0281|M.gilvum_PYR-GCK VFLLPALRDGAPAVPVALVASAAILYAVLYLAHGVSLRTSAALLGTLASL
Mvan_0617|M.vanbaalenii_PYR-1 VFLLPALRDGAPAVPVSLVASAAILYAVIYLAHGVSLRTSAALLGTLASL
TH_0765|M.thermoresistible__bu VFLLPALRDGAPAVPVALVGSAAILFAVLYLAHGVSLRTSAALLGTLMSL
MSMEG_0687|M.smegmatis_MC2_155 VFLLPALRDGASAVPVSLVASAVILYAVIYLAHGVSLRTSAALLGTLTAL
MAV_4819|M.avium_104 TFLLPALRDGAPAVPVALVAAAAILYAVIYLAHGVSLRTSAALLGTLSSL
MAB_1599|M.abscessus_ATCC_1997 VFLLPALRDGGPALPLALIASAAILFVVIYLAHGVSMRTSAALLGTLTAM
.*********..*:*::*:.:*.**:.*:*******:********** ::
Mflv_0281|M.gilvum_PYR-GCK LLAAGLSWAAIEFTHITGLSEDQNNEVAAYLGNVSITGMLLAGFIIGSLG
Mvan_0617|M.vanbaalenii_PYR-1 LLAAVLSWAAIELAHLTGLSEDQNNTVAAYLGNVSITGLLLAGFIIGSLG
TH_0765|M.thermoresistible__bu LLAAFLSWAAIELLHLTGLSEDQNNEVAAYLGNVSITGLLLAGFIIGSLG
MSMEG_0687|M.smegmatis_MC2_155 FLAALLSWAAIELAHLTGLAEDQNNDVAAYMGNVSITGLLLAGFIIGSLG
MAV_4819|M.avium_104 LLAAGLSWAAIQLAHLTGLSDEQNSTVSAYLGSVSIGGLLLAGFIIGSLG
MAB_1599|M.abscessus_ATCC_1997 LLAAGLSWAVIELTHLTGLSDEQNNEVAAYMGGVSISGLLLAGFIIGSLG
:*** ****.*:: *:***:::**. *:**:*.*** *:***********
Mflv_0281|M.gilvum_PYR-GCK VLNDVTVTQASTAFELAAVGDGATRRQVFVGAMRVGRDHIASTVYTLVLA
Mvan_0617|M.vanbaalenii_PYR-1 VLNDVTVTQASTAFELAALGDGASRRAVFVGAMRVGRDHIASTVYTLVLA
TH_0765|M.thermoresistible__bu VLNDVTITQASAVFELANL-EGSSRRAAFVGAMRVGSDHIASTVYTLVLA
MSMEG_0687|M.smegmatis_MC2_155 VLNDVTVTQASAVFELAEA--GGTRRSIFVGAMRVGRDHIASTVYTLVLA
MAV_4819|M.avium_104 VLNDVTVTQSSTVFELARL--GGSRRAIFTGALRVGRDHIASTVYTLVLA
MAB_1599|M.abscessus_ATCC_1997 VLNDVTVTQASTVYELAELGDGSSRRDIFLGAMRVGRDHIASTVYTLVLA
******:**:*:.:*** *.:** * **:*** *************
Mflv_0281|M.gilvum_PYR-GCK YAGSALPLLLLFSVANRSLGDVLTSESVAIEVARSAVGGIALALSVPLTT
Mvan_0617|M.vanbaalenii_PYR-1 YAGSALPLLLLFSVANRSLGDVLTSESVAIEIARSAVGGIALALSVPLTT
TH_0765|M.thermoresistible__bu YAGSALPLLLLFSVADRSLTDVLTSELVAIEVARSAVGGIALALSVPLTT
MSMEG_0687|M.smegmatis_MC2_155 YAGSALPLLLLFSVANRSLGDVLTSENVAVEVARSAVGGIALALSVPLTT
MAV_4819|M.avium_104 YAGSSLPLLLLFSVANRSLTDVLTGESVAIEIARSAVGGMALALSVPLTT
MAB_1599|M.abscessus_ATCC_1997 YAGNSLPLMLLFSVANRSLGDVLTSEGVAIEIARSAVGGIALVLSVPLTT
***.:***:******:*** ****.* **:*:*******:**.*******
Mflv_0281|M.gilvum_PYR-GCK GIAAMLATPQQRR---H-------------------
Mvan_0617|M.vanbaalenii_PYR-1 GIAVLLATPRHTS---H-------------------
TH_0765|M.thermoresistible__bu AIAAVLATPKSRAGAPHSTRSASVSPVARRAEPRSS
MSMEG_0687|M.smegmatis_MC2_155 GIAAVLATPSVASPAR--------------------
MAV_4819|M.avium_104 AIAAVLARPSGGRKRGEAGRGGPPPSV---------
MAB_1599|M.abscessus_ATCC_1997 AIAAALATPGKVRTGA--------------------
.**. ** *