For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VHSYTPGSRLPEDLSARRVTTDGSVILGVSGILGVAATGVLAPHLVLPAVTTVLAALYLASTIDRHWLLV QGLRSPSLLTISDEEARAVPDNQLPVYTVLLPVYNEPSIVHNLIAGVGRLEYPKDKLEILLLVEEDDIAT RRAMATTELEAVRLILVPNSQPKTKPKACNYGMATPGLKGEMVTIYDAEDIPDPLQLRKTVVAFQQLPDN VGCIQARLGYFNEEQNLLTRWFSMEYDQWFGMTLPAVEAAGCVVPLGGTSNHMRTSVWRAIGGWDEFNVT EDADLGVRLARAGYRTRILDSVTLEEANSDVLNWIRQRSRWYKGYLQTMLVHLRHPAALWSQVGGKGILR LLNMTGAVPIVAVINLVFWATMAAWVLGRPDVVELAFPGATYYVYLTMYVVGAPLSVFMGLIVTQRLGKP YMWWAAALVPLYWMLQSIAALKAVFQLVTRPQFWEKTVHGLSDTVDVPNSTGRPT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0207 | - | - | 100% (475) | hypothetical protein Mflv_0207 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0476 | - | 1e-09 | 24.70% (247) | chitin synthase |
M. thermoresistible (build 8) | TH_1903 | - | 4e-05 | 23.46% (439) | PROBABLE MEMBRANE SUGAR TRANSFERASE |
M. ulcerans Agy99 | MUL_1247 | uspB | 4e-05 | 24.82% (141) | sugar-transport integral membrane protein ABC transporter |
M. vanbaalenii PYR-1 | Mvan_4863 | - | 1e-30 | 28.18% (433) | glycosyl transferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0207|M.gilvum_PYR-GCK -MHSYTPGSRLPEDLSARRVTTDGSVILGVSGILGVAATGVLAPHLVLPA Mvan_4863|M.vanbaalenii_PYR-1 ---MGSSGGALPQADGVQSAT--GAPAQASPAPPPRPDDAAGWPQWLLYI MSMEG_0476|M.smegmatis_MC2_155 MATIAAADRTVTSVRPAELGVKVVIVMALLLIVMLIFAYKVVSLHNMKDE TH_1903|M.thermoresistible__bu -----MTGQRLPDGFAVQVDRRVKVLGEGAALLGGSPTRLLKLAPAARTM MUL_1247|M.ulcerans_Agy99 -------------------------------------------------M Mflv_0207|M.gilvum_PYR-GCK VTTVLAALYLASTIDRHWLLVQGLRSPSLLTISDEEARAVPDNQLPVYTV Mvan_4863|M.vanbaalenii_PYR-1 VMTVISLLLFIVAATTLWWMLHAWRSPESLHSTG--FRRRSAGRPKGFSL MSMEG_0476|M.smegmatis_MC2_155 PFWAAYGLIITAFIFTRFGLAALYRPP----------RRDTGNYWPVVAI TH_1903|M.thermoresistible__bu LAGGRLEVRDAVSAQLARTLLDATVAHP---------RPASGPSHRDVTV MUL_1247|M.ulcerans_Agy99 PTRVIYAGLVLGALITLLPFALGLLTS-----------FTSAHQFATGTP : . . : Mflv_0207|M.gilvum_PYR-GCK LLPVYNEPSIVHNLIAGVGRLEYPKDKLEILLLVEEDDIATRRAMATTEL Mvan_4863|M.vanbaalenii_PYR-1 LLPARHEQDVLGDTIDALARLDHPLYEVIVIIGHDDPETEHVARAAAARH MSMEG_0476|M.smegmatis_MC2_155 IVPAYNEPDIARTLLHCVG-VDYPRELLRVVVVDDKSSDDTLRRITDFAA TH_1903|M.thermoresistible__bu VIPVRDNAFGLHRLMRALR-------GLRVIIVDDGS--AVPVDAAEFTG MUL_1247|M.ulcerans_Agy99 LQLPHPPTLTNYADLGGAG----------------------FGRAALVTA : : : Mflv_0207|M.gilvum_PYR-GCK EAVRLILVPNSQPKTKPKACNYGMATPGLKGEMVTIYDAEDIPDPLQLRK Mvan_4863|M.vanbaalenii_PYR-1 PRIVRVVIDTNIPKNKPKALNT--ALPTCRGEIVGVFDAEDEVHPRLLRL MSMEG_0476|M.smegmatis_MC2_155 EHPNLTVIPHEVNGGKRRAMATG-MAAADDADLFVFIDSDSQVTRDAIRV TH_1903|M.thermoresistible__bu LHCDVQVLRHPHSKGPAAARNTG--LAACTTDFVAFLDSDVVPQRGWLEA MUL_1247|M.ulcerans_Agy99 LMTTVILLGQMTFSVLAAYAFARLEFPGRDGLFWVYIATLMVPATVTVVP :: . : : : Mflv_0207|M.gilvum_PYR-GCK TVVAFQQLPDNVGCIQARLGYFNEEQNLLTRWFSMEYDQWFGMTLPAVEA Mvan_4863|M.vanbaalenii_PYR-1 VEARFEEARADV--VQSGVQLMNIQTSWWSLRNCLEYYFWFRSRL-HFHA MSMEG_0476|M.smegmatis_MC2_155 IASYFADS--SVGAVCGHTDVTNISHNILTRMQAMQYYIAFRIYKSAEAL TH_1903|M.thermoresistible__bu LLGHFCDP--AVALVAPRIVGLRKDDNLIARYEAVRSSLDLGVREAPVVP MUL_1247|M.ulcerans_Agy99 LYLMMAQLG--------------LRNTFWALVLPFLFGSPYAIFLLREHF : : . : . Mflv_0207|M.gilvum_PYR-GCK AGCVVPLGGTSNHMRTSVWRAIGG--WDEFNVTEDADLGVRLARAGYRT- Mvan_4863|M.vanbaalenii_PYR-1 DQRFIPLGGNTVFARTALLRSVGG--WDRDCLAEDCEIGVRLSTRGARV- MSMEG_0476|M.smegmatis_MC2_155 FGSVTCCSGCFSAYRADAVRPVADKWLNQTFLGRPSTFGDDRSLTNYLLR TH_1903|M.thermoresistible__bu YGPVSYVPSAAIICRRKVLDEIGG-FDEALRSGEDVDLCWRLVEAGTRLR MUL_1247|M.ulcerans_Agy99 R------------------------------------------------- Mflv_0207|M.gilvum_PYR-GCK --RILDS---VTLEEANSDVLNWIRQRSRWYKGYLQTMLVHLRHPAALWS Mvan_4863|M.vanbaalenii_PYR-1 --AVAYDPKVVTREETPGSLRALVKQRTRWDQGFMQVYRKGE------WR MSMEG_0476|M.smegmatis_MC2_155 DWRVLYAPDAQAYTNVPEHLKQFLRQQLRWKKS---------------WL TH_1903|M.thermoresistible__bu -----YEPIALVAHDHRTDIGEWLGRKAFYGSSAAPLT----------AR MUL_1247|M.ulcerans_Agy99 --------------IIPNDMINAARLDG---------------------- : Mflv_0207|M.gilvum_PYR-GCK QVGGKGILRLLNMTGAVPIVAVIN--LVFWATMAAWVLG-RPDVVELAFP Mvan_4863|M.vanbaalenii_PYR-1 KLPSRRQRMLARYTLAMPFLQAATGALVPIAIACMFVLK-VPVPLTLLSF MSMEG_0476|M.smegmatis_MC2_155 REAPRAMCAVRRKNPVMVVMFALS--IVLPLIAPQVVMR-AFVVQPHFIS TH_1903|M.thermoresistible__bu HPDKTAPLLMSGWTLVLGVLVAMGSWVGYLAALVLAVITGRRVAKSLSTV MUL_1247|M.ulcerans_Agy99 ---------ANTLDVLVHVVIPSNRPVLAAMTLITVVSQWNNFMWPLVIT : .: : * Mflv_0207|M.gilvum_PYR-GCK GATYYVYLTMYVVGAPLSVFMGLIVTQRLGKPYMWWAAALVPL----YWM Mvan_4863|M.vanbaalenii_PYR-1 LPLAPTLVTVAVEAAALGEFG-----KEFGIRIRLWDQVRLVLGAFPYQL MSMEG_0476|M.smegmatis_MC2_155 QLPFWYFGGVAAIAVIYGLFY------RLHRPVKRWYQGIFFT---MFYT TH_1903|M.thermoresistible__bu GSEPVEVVALAAQGLGSAARQLAGAICRHYWPIALIAALLSPRFRQVVVV MUL_1247|M.ulcerans_Agy99 SGHKWRVLTVATADLQS----------RFNAQWTLVMAATTVA--IVPLI : . . Mflv_0207|M.gilvum_PYR-GCK LQSIAALKAVFQLVTRPQFWEKTVHGLSDTVDVPNSTGRPT--------- Mvan_4863|M.vanbaalenii_PYR-1 LLAAAAVRSVWRELRGQGGWEKTEHVNAHRAGGREEAIAA---------- MSMEG_0476|M.smegmatis_MC2_155 IILVLQMPYAMVTIRDSKWGTR---------------------------- TH_1903|M.thermoresistible__bu AAVVDGVVDWLSRREHAGEDTKPVGLFAYLVLKRLDDLAYGCGLWAGVLR MUL_1247|M.ulcerans_Agy99 VLFVAAQRHIVSSIAVSGLK------------------------------ Mflv_0207|M.gilvum_PYR-GCK ------------- Mvan_4863|M.vanbaalenii_PYR-1 ------------- MSMEG_0476|M.smegmatis_MC2_155 ------------- TH_1903|M.thermoresistible__bu ERDLGALKPQIRI MUL_1247|M.ulcerans_Agy99 -------------