For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LRLGAGFRKPVPTLLLEHRSRKSGKNFVAPLLYITDRNNVIVVASALGQAENPQWYRNLPPNPDTHIQIG SDRRPVRAVVASSDERARLWPRPVDAYADFDSCQSWTERGIPVIILRPR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3204 | - | - | 100% (119) | hypothetical protein Mb3204 |
| M. bovis AF2122 / 97 | Mb3577 | - | 7e-21 | 40.52% (116) | hypothetical protein Mb3577 |
| M. bovis AF2122 / 97 | Mb1584 | - | 2e-13 | 35.51% (107) | hypothetical protein Mb1584 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1505 | - | 1e-16 | 34.82% (112) | hypothetical protein Mflv_1505 |
| M. tuberculosis H37Rv | Rv3178 | - | 2e-67 | 100.00% (119) | hypothetical protein Rv3178 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0609c | - | 1e-25 | 47.01% (117) | hypothetical protein MAB_0609c |
| M. marinum M | MMAR_5035 | - | 8e-23 | 43.10% (116) | hypothetical protein MMAR_5035 |
| M. avium 104 | MAV_0613 | - | 1e-20 | 42.61% (115) | AclJ protein |
| M. smegmatis MC2 155 | MSMEG_5998 | - | 2e-16 | 35.90% (117) | hypothetical protein MSMEG_5998 |
| M. thermoresistible (build 8) | TH_2473 | - | 3e-45 | 69.49% (118) | PUTATIVE conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_4109 | - | 1e-16 | 42.86% (105) | hypothetical protein MUL_4109 |
| M. vanbaalenii PYR-1 | Mvan_5261 | - | 8e-18 | 38.14% (118) | hypothetical protein Mvan_5261 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5035|M.marinum_M MPKSPPRF-------LNSPFTDFFIKWMSRINTFMYRRNGGEGLG-----
MUL_4109|M.ulcerans_Agy99 MPKSPPRF-------LNSPYTDFFIKWMSRINTFMYRRNDGEGLG-----
MAV_0613|M.avium_104 ---------------MNSPMTGFFIKWMSRVNTWMYRVSRGK-WG-----
Mflv_1505|M.gilvum_PYR-GCK MTKAPKPLTPKQVESLNSNAVGTGIKWMSKLNTWAYKATGGRLGAKWRGG
Mvan_5261|M.vanbaalenii_PYR-1 MAQPPRPLTPKQVENLNSKAVGVAIKWMSKFNTWAYKATGGRIGYNWRLG
MSMEG_5998|M.smegmatis_MC2_155 MADTSRPLNAKQLERLNAKSTGTLIKWMSRFQTFLFKTTNGKLG------
MAB_0609c|M.abscessus_ATCC_199 MTAPGSSANAP--AQLNSEFAGKVIKWMTTVNVWLYQRTDGRLGGKWRVG
Mb3204|M.bovis_AF2122/97 ----------------------------------------------MRLG
Rv3178|M.tuberculosis_H37Rv ----------------------------------------------MRLG
TH_2473|M.thermoresistible__bu -------MVPERPKQLDSPLLPVIFRYATRAQVWVYRRTGGRIGGKWRIG
MMAR_5035|M.marinum_M -GTFQK-IPVALLTTTGRKTGEPRVSPLYFHRDGDRVIVAASKGGSAKNP
MUL_4109|M.ulcerans_Agy99 -GTFQK-IPVALLTTTGRKTGEPRVSPLYFHRDGDRVIVAASKGGSAKNP
MAV_0613|M.avium_104 -GTFQK-RPVALLTTTGRKTGQPRVSPLLYLREGDRVILVASQGGRDKHP
Mflv_1505|M.gilvum_PYR-GCK SNRFSAPPPVGILTTIGRKSGEPRESPLLFLREGDRIVLVASQGGRATNP
Mvan_5261|M.vanbaalenii_PYR-1 SNRFSAPPPVGILTTIGRKSGQPRESPLLFLREGDRVVLVASQGGRASNP
MSMEG_5998|M.smegmatis_MC2_155 -NKFLRGTEVGILTTIGRKSGEPRDTPLLFLQEGRRIVLVASQGGRATNP
MAB_0609c|M.abscessus_ATCC_199 -AAFPWGIPVLLLTTTGRKTGQQRLSALLYLPDGDKVVLVASQGGRASNP
Mb3204|M.bovis_AF2122/97 -AGFRKPVPTLLLEHRSRKSGKNFVAPLLYITDRNNVIVVASALGQAENP
Rv3178|M.tuberculosis_H37Rv -AGFRKPVPTLLLEHRSRKSGKNFVAPLLYITDRNNVIVVASALGQAENP
TH_2473|M.thermoresistible__bu -AGFRKPVPTLLLEHRGRRSGKTFVVPLLYMRDGDDVIVVASQGGRRENP
* . :* .*::*: .* : : :::.** * :*
MMAR_5035|M.marinum_M MWYLNLKANPKVGVQIKKEVLDLTARDATDEERARYWPKLVDMYPSY---
MUL_4109|M.ulcerans_Agy99 MWYLNLKANPNVGVQIKKEVLDLTARDATDEERARYWPKLVDMYPSWTCI
MAV_0613|M.avium_104 LWYLNLKANPKVSVQIKDEVLQLQARDATPEEREQYWPKLVAMYPSF---
Mflv_1505|M.gilvum_PYR-GCK MWYLNIQANPKVTFQVKNEKLTLVARDATDAERDEYWPKLDAIYPDF---
Mvan_5261|M.vanbaalenii_PYR-1 MWYLNVKANPAVTFQIRNEKLKLIAREATDAERDEYWPKLDAMYPDF---
MSMEG_5998|M.smegmatis_MC2_155 MWYLNLKANPKVTFQTRSEKLALVAREATDAERDEYWPKLDAMYPDF---
MAB_0609c|M.abscessus_ATCC_199 AWYLNLKANSEVTVQIKGDIRTMTARTATDAERAYYWPKLVELYADF---
Mb3204|M.bovis_AF2122/97 QWYRNLPPNPDTHIQIGSDRRPVRAVVASSDERARLWPRPVDAYADF---
Rv3178|M.tuberculosis_H37Rv QWYRNLPPNPDTHIQIGSDRRPVRAVVASSDERARLWPRPVDAYADF---
TH_2473|M.thermoresistible__bu QWYRNLVVDPDVHIEIGGQRLPVRARTATPEERARLWPRLVELYADF---
** *: :. . .: : : * *: ** **: *..:
MMAR_5035|M.marinum_M -----------EDYQSWTDRTIPIVVCEP---
MUL_4109|M.ulcerans_Agy99 PPMRTTSPGPTGRFRSSSASPSPRRTPDA---
MAV_0613|M.avium_104 -----------DDYQSWTDRVIPVVICDP---
Mflv_1505|M.gilvum_PYR-GCK -----------VNYRTYTDRKIPILICDPA--
Mvan_5261|M.vanbaalenii_PYR-1 -----------ANYRSYTDRQIPILICDPDSR
MSMEG_5998|M.smegmatis_MC2_155 -----------ANYRSYTDRKIPIVICDPA--
MAB_0609c|M.abscessus_ATCC_199 -----------DKYQSYTTRQIPVVILEP---
Mb3204|M.bovis_AF2122/97 -----------DSCQSWTERGIPVIILRPR--
Rv3178|M.tuberculosis_H37Rv -----------DSCQSWTERGIPVIILRPR--
TH_2473|M.thermoresistible__bu -----------DTYQSWTDREIPVVILQPR--
:: : * .