For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPKSPPRFLNSPYTDFFIKWMSRINTFMYRRNDGEGLGGTFQKIPVALLTTTGRKTGEPRVSPLYFHRDG DRVIVAASKGGSAKNPMWYLNLKANPNVGVQIKKEVLDLTARDATDEERARYWPKLVDMYPSWTCIPPMR TTSPGPTGRFRSSSASPSPRRTPDA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4109 | - | - | 100% (165) | hypothetical protein MUL_4109 |
M. ulcerans Agy99 | MUL_1549 | - | 6e-16 | 35.20% (125) | hypothetical protein MUL_1549 |
M. ulcerans Agy99 | MUL_4480 | - | 3e-12 | 34.62% (104) | hypothetical protein MUL_4480 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3577 | - | 2e-67 | 88.72% (133) | hypothetical protein Mb3577 |
M. gilvum PYR-GCK | Mflv_1505 | - | 6e-34 | 52.63% (133) | hypothetical protein Mflv_1505 |
M. tuberculosis H37Rv | Rv3547 | - | 3e-67 | 88.72% (133) | hypothetical protein Rv3547 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0609c | - | 2e-35 | 54.55% (132) | hypothetical protein MAB_0609c |
M. marinum M | MMAR_5035 | - | 2e-74 | 96.99% (133) | hypothetical protein MMAR_5035 |
M. avium 104 | MAV_0613 | - | 6e-49 | 73.60% (125) | AclJ protein |
M. smegmatis MC2 155 | MSMEG_5998 | - | 2e-33 | 53.97% (126) | hypothetical protein MSMEG_5998 |
M. thermoresistible (build 8) | TH_0360 | - | 2e-52 | 71.43% (133) | CONSERVED HYPOTHETICAL PROTEIN |
M. vanbaalenii PYR-1 | Mvan_5261 | - | 1e-33 | 53.03% (132) | hypothetical protein Mvan_5261 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3577|M.bovis_AF2122/97 -------MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQK Rv3547|M.tuberculosis_H37Rv -------MPKSPPRFLNSPLSDFFIKWMSRINTWMYRRNDGEGLGGTFQK MUL_4109|M.ulcerans_Agy99 -------MPKSPPRFLNSPYTDFFIKWMSRINTFMYRRNDGEGLGGTFQK MMAR_5035|M.marinum_M -------MPKSPPRFLNSPFTDFFIKWMSRINTFMYRRNGGEGLGGTFQK TH_0360|M.thermoresistible__bu ----MTAMAKSPPPNLNSPWADVFIKWMARLNTWAYRASGGR-LGGTMFR MAV_0613|M.avium_104 ---------------MNSPMTGFFIKWMSRVNTWMYRVSRGK-WGGTFQK MAB_0609c|M.abscessus_ATCC_199 --MTAPGSSANAPAQLNSEFAGKVIKWMTTVNVWLYQRTDGR-LGGKWRV Mflv_1505|M.gilvum_PYR-GCK MTKAPKPLTPKQVESLNSNAVGTGIKWMSKLNTWAYKATGGR-LGAKWRG Mvan_5261|M.vanbaalenii_PYR-1 MAQPPRPLTPKQVENLNSKAVGVAIKWMSKFNTWAYKATGGR-IGYNWRL MSMEG_5998|M.smegmatis_MC2_155 MADTSRPLNAKQLERLNAKSTGTLIKWMSRFQTFLFKTTNGK-LG----- :*: . ****: .:.: :: . *. * Mb3577|M.bovis_AF2122/97 --------IPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKN Rv3547|M.tuberculosis_H37Rv --------IPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKN MUL_4109|M.ulcerans_Agy99 --------IPVALLTTTGRKTGEPRVSPLYFHRDGDRVIVAASKGGSAKN MMAR_5035|M.marinum_M --------IPVALLTTTGRKTGEPRVSPLYFHRDGDRVIVAASKGGSAKN TH_0360|M.thermoresistible__bu --------APVALLTTTGRKTGQPRVSPLLYLRDGERIIVAASRGGSDKN MAV_0613|M.avium_104 --------RPVALLTTTGRKTGQPRVSPLLYLREGDRVILVASQGGRDKH MAB_0609c|M.abscessus_ATCC_199 GAAFPWG-IPVLLLTTTGRKTGQQRLSALLYLPDGDKVVLVASQGGRASN Mflv_1505|M.gilvum_PYR-GCK GSNRFSAPPPVGILTTIGRKSGEPRESPLLFLREGDRIVLVASQGGRATN Mvan_5261|M.vanbaalenii_PYR-1 GSNRFSAPPPVGILTTIGRKSGQPRESPLLFLREGDRVVLVASQGGRASN MSMEG_5998|M.smegmatis_MC2_155 --NKFLRGTEVGILTTIGRKSGEPRDTPLLFLQEGRRIVLVASQGGRATN * :*** ***:*: * ..* : :* ::::.**:** .: Mb3577|M.bovis_AF2122/97 PMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSY-- Rv3547|M.tuberculosis_H37Rv PMWYLNLKANPKVQVQIKKEVLDLTARDATDEERAEYWPQLVTMYPSY-- MUL_4109|M.ulcerans_Agy99 PMWYLNLKANPNVGVQIKKEVLDLTARDATDEERARYWPKLVDMYPSWTC MMAR_5035|M.marinum_M PMWYLNLKANPKVGVQIKKEVLDLTARDATDEERARYWPKLVDMYPSY-- TH_0360|M.thermoresistible__bu PMWYLNLKANPEVSVQIRREVLELTARDATEAERARYWPQLVAMYPTF-- MAV_0613|M.avium_104 PLWYLNLKANPKVSVQIKDEVLQLQARDATPEEREQYWPKLVAMYPSF-- MAB_0609c|M.abscessus_ATCC_199 PAWYLNLKANSEVTVQIKGDIRTMTARTATDAERAYYWPKLVELYADF-- Mflv_1505|M.gilvum_PYR-GCK PMWYLNIQANPKVTFQVKNEKLTLVARDATDAERDEYWPKLDAIYPDF-- Mvan_5261|M.vanbaalenii_PYR-1 PMWYLNVKANPAVTFQIRNEKLKLIAREATDAERDEYWPKLDAMYPDF-- MSMEG_5998|M.smegmatis_MC2_155 PMWYLNLKANPKVTFQTRSEKLALVAREATDAERDEYWPKLDAMYPDF-- * ****::**. * .* : : : ** ** ** ***:* :*. : Mb3577|M.bovis_AF2122/97 ------------QDYQSWTDRTIPIVVCEP-------- Rv3547|M.tuberculosis_H37Rv ------------QDYQSWTDRTIPIVVCEP-------- MUL_4109|M.ulcerans_Agy99 IPPMRTTSPGPTGRFRSSSASPSPRRTPDA-------- MMAR_5035|M.marinum_M ------------EDYQSWTDRTIPIVVCEP-------- TH_0360|M.thermoresistible__bu ------------EDYQRWTDRVIPLVVCEPRSAANQEP MAV_0613|M.avium_104 ------------DDYQSWTDRVIPVVICDP-------- MAB_0609c|M.abscessus_ATCC_199 ------------DKYQSYTTRQIPVVILEP-------- Mflv_1505|M.gilvum_PYR-GCK ------------VNYRTYTDRKIPILICDPA------- Mvan_5261|M.vanbaalenii_PYR-1 ------------ANYRSYTDRQIPILICDPDSR----- MSMEG_5998|M.smegmatis_MC2_155 ------------ANYRSYTDRKIPIVICDPA------- :: : * :.