For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVR SRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQT VIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAV LATGVAGFVFSWLRRRSGSLIAPIALHWSLNGMGALAAALVWHLST
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1894c | - | - | 100% (256) | integral membrane protein |
| M. bovis AF2122 / 97 | Mb0827 | - | 2e-15 | 34.38% (192) | hypothetical protein Mb0827 |
| M. bovis AF2122 / 97 | Mb0677c | - | 6e-07 | 25.93% (216) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3342 | - | 1e-109 | 73.33% (255) | abortive infection protein |
| M. tuberculosis H37Rv | Rv1863c | - | 1e-144 | 100.00% (256) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0497 | - | 4e-94 | 69.87% (239) | hypothetical protein MAB_0497 |
| M. marinum M | MMAR_2740 | - | 1e-125 | 85.49% (255) | hypothetical protein MMAR_2740 |
| M. avium 104 | MAV_2856 | - | 1e-113 | 83.76% (234) | caax amino protease family protein |
| M. smegmatis MC2 155 | MSMEG_3612 | - | 1e-116 | 79.84% (248) | integral membrane protein |
| M. thermoresistible (build 8) | TH_1367 | - | 1e-114 | 81.74% (241) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_0411 | - | 3e-14 | 32.28% (189) | hypothetical protein MUL_0411 |
| M. vanbaalenii PYR-1 | Mvan_3070 | - | 1e-113 | 76.47% (255) | abortive infection protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1894c|M.bovis_AF2122/97 MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTT
Rv1863c|M.tuberculosis_H37Rv MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTT
MMAR_2740|M.marinum_M MRDHAT--TAPHPDPLVTQLSALHRLRIHLDVAVVVVVLVLTNLIAHFTT
MAV_2856|M.avium_104 MRDATA-----TADLQASQPPGLHRFRIHLDIAVVVVVLVLTNLVAHFTT
MSMEG_3612|M.smegmatis_MC2_155 -----M--AAQHPHPLMAQLAALHHFRIYVDIAIVVVVLAMTNLIAHFTT
TH_1367|M.thermoresistible__bu ---------------VVAQLAALSRFRTYVDVAVVVVVLAICNLIAHFTT
Mflv_3342|M.gilvum_PYR-GCK MSDAVA--APPEPHPLAAQLSALQHFRLYVDIAIVVVVLALSNLLAHFTT
Mvan_3070|M.vanbaalenii_PYR-1 MSDAIA--APVEHHPWMGHLSALHHFRIYVDIAIVVVVLALTNLLAHFTT
MAB_0497|M.abscessus_ATCC_1997 --------MPTQTPAAVAPLHGLRDVRTYIDIAVVVAVLVATNLIAHFTT
MUL_0411|M.ulcerans_Agy99 ---------------------------------MVSWSLASPRLPARWR-
:* *. .* *::
Mb1894c|M.bovis_AF2122/97 PWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALV
Rv1863c|M.tuberculosis_H37Rv PWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALV
MMAR_2740|M.marinum_M PWASIATVPAAAVGLVILVRSRGLGWAELGLGREHWRSGMFYALAAVGLV
MAV_2856|M.avium_104 PWASIGTVPAAAVGLVILMRYRGLGWTDLGLGRDHWKSGVGYALAAVAVV
MSMEG_3612|M.smegmatis_MC2_155 PWASIATVPAAAVGLLALARARGWGWTELGLGREHWKTGAGYALAAVGVV
TH_1367|M.thermoresistible__bu PWASVATVPAVAVGLVLLVRSRGLGWAELGLSREHWRSGAGYAAAAVALV
Mflv_3342|M.gilvum_PYR-GCK PWANVAVIPAAAVGLLFMVRSRGLGWSELGLGREHWRSGAGYALGAVALV
Mvan_3070|M.vanbaalenii_PYR-1 PWANIAVVPAAAVGLLLLVRSRGLGWSELGLGREHWKSGAGYALGAVALV
MAB_0497|M.abscessus_ATCC_1997 PWANFVVVPIAAIGLLALIRYRGHSWAELGLGRDHWRSGAKYAAVAVVIV
MUL_0411|M.ulcerans_Agy99 -----VALQAVLGGLLVLVTR-----APLGLTPPRLWAGLRLGAVAAAPV
.: . **: : : *** : :* . *. *
Mb1894c|M.bovis_AF2122/97 VAVISVGVLLPITRPMFMNHHYAT-ISGAVIASMVMIPLQTVIPEELAFR
Rv1863c|M.tuberculosis_H37Rv VAVISVGVLLPITRPMFMNHHYAT-ISGAVIASMVMIPLQTVIPEELAFR
MMAR_2740|M.marinum_M VLVISAGVLLPMTRPMFMNNHYAT-VSGAVIASMVIIPLQTVIPEELAFR
MAV_2856|M.avium_104 AAVIAIGVLLPATRPMFMNNRYAT-ISGAMIASMVVIPVQTVIPEELAFR
MSMEG_3612|M.smegmatis_MC2_155 LSVIAIGALLPWTRPMFMNDNYAT-LSGALIASMIIIPLQTVIPEELAFR
TH_1367|M.thermoresistible__bu LSVIAIGALLPWTRPMFLNNNYAT-ISGALIASMVIIPLQTVIPEELAFR
Mflv_3342|M.gilvum_PYR-GCK GTVIAIGALLPWTRPMFLNNNYAT-LSGALIASMIIIPLQTVIPEELAFR
Mvan_3070|M.vanbaalenii_PYR-1 GTVIAVGVLLPVTRPMFLNDNYAT-LSGALVASMIIIPLQTVIPEELAFR
MAB_0497|M.abscessus_ATCC_1997 GAVIGIGLLLPITRPMFLNSSYATTVSGALLASFVLIPLQTVIPEELAFR
MUL_0411|M.ulcerans_Agy99 ATATAATTPVPMVRLSMSERDLPASVPGWLG---LQIPFGTVWAEEAAFR
. . :* .* : : .: :.* : : **. ** .** ***
Mb1894c|M.bovis_AF2122/97 GVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGI
Rv1863c|M.tuberculosis_H37Rv GVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGI
MMAR_2740|M.marinum_M GVLHGALNRAWGFRGVALAGSLLFGLWHVATSLGLTSSNVGFTRLFGGGI
MAV_2856|M.avium_104 GVLHGALNRAWGFRGVALAGSLLFGLWHVATSFGLTSGNVGFTRLFGGGM
MSMEG_3612|M.smegmatis_MC2_155 GVLHGALDRAWGFRGVAAAGSLLFGMWHIATSLGLTSSNVGFTRLFGGGI
TH_1367|M.thermoresistible__bu GVLHGALSRAWGFRGVAAAGSLLFGLWHVATSLGLTSSNVGFTRLFGGGV
Mflv_3342|M.gilvum_PYR-GCK GVLHGALEQAWGWRGVAAAGSLLFGLWHIATSLGLTASNAGFTKILGGGV
Mvan_3070|M.vanbaalenii_PYR-1 GVLHGALDRAWGWRGVAAAGSLLFGLWHIATSLGLTASNVGFTKILGGGV
MAB_0497|M.abscessus_ATCC_1997 GVLHGTMARAWGFRGVAAVGSLLFGFWHIATSLGLTTGNVGLTRLLGVGL
MUL_0411|M.ulcerans_Agy99 AALATMGTRGFGHVGGQLLQAVTFGLSHVADAR-----------------
..* :.:* * :: **: *:* :
Mb1894c|M.bovis_AF2122/97 IGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSLNGMGALAAA
Rv1863c|M.tuberculosis_H37Rv IGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSLNGMGALAAA
MMAR_2740|M.marinum_M VGMVAGVVLAVLATGAAGFVFSWLRRRSGSLIAPIALHWSLNGVGALAAA
MAV_2856|M.avium_104 VGMMAGVTGAVLATGAAGFVFSWLRRRSGSLIAPIALHWSLNGLGALAAA
MSMEG_3612|M.smegmatis_MC2_155 LGTVAGVVLAVVATGIAGFVFSWLRRRSGSLLAPIALHWSLNGMGALAAA
TH_1367|M.thermoresistible__bu LGTVAGVVLAVIATAVAGFVFDWLRRRSGSLLAPIALHWSLNGMGALAAA
Mflv_3342|M.gilvum_PYR-GCK FGMVAGVVGAVIATAAAGFVFSWLRRRSGSLIAPIALHWSLNGLGALAAA
Mvan_3070|M.vanbaalenii_PYR-1 FGMVVGVVGAVIATAAAGFVFTWLRRRSGSLIAPIALHWSLNGLGALAAA
MAB_0497|M.abscessus_ATCC_1997 WAQIAGVAGAVVATAIAGFVFTWLRRRSGSLLAPIALHWSLNGMGVLAAV
MUL_0411|M.ulcerans_Agy99 -ATGAPPVPTVLVTGLAGWLFGWLAERSGSLAAPMVLHLAINEAGAVAAL
. . :*:.*. **::* ** .***** **:.** ::* *.:**
Mb1894c|M.bovis_AF2122/97 LVWHLST------------
Rv1863c|M.tuberculosis_H37Rv LVWHLST------------
MMAR_2740|M.marinum_M VVWHLSN------------
MAV_2856|M.avium_104 FVWHLST------------
MSMEG_3612|M.smegmatis_MC2_155 VVWHIST------------
TH_1367|M.thermoresistible__bu LVWHLST------------
Mflv_3342|M.gilvum_PYR-GCK LVWHLS-------------
Mvan_3070|M.vanbaalenii_PYR-1 LVWHLS-------------
MAB_0497|M.abscessus_ATCC_1997 LVWHLI-------------
MUL_0411|M.ulcerans_Agy99 TVQRRWINGAEITPRRRYT
* :