For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRPALSDYQHVASGKVREIYRVDDEHLLLVASDRISAYDYVLDSTIPDKGRVLTAMSAFFFGLVDAPNHL AGPPDDPRIPDEVLGRALVVRRLEMLPVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASRFATPLF TPATKAALGDHDENISFDRVVEMVGALRANQLRDRTLQTYVQAADHALTRGIIIADTKFEFGIDRHGNLL LADEIFTPDSSRYWPADDYRAGVVQTSFDKQFVRSWLTGSESGWDRGSDRPPPPLPEHIVEATRARYINA YERISELKFDDWIGPGA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0803 | hemH | - | 100% (297) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1616 | - | 1e-136 | 77.78% (297) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. tuberculosis H37Rv | Rv0780 | hemH | 1e-174 | 100.00% (297) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. leprae Br4923 | MLBr_02227 | purC | 1e-144 | 81.48% (297) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. abscessus ATCC 19977 | MAB_0689 | - | 1e-134 | 75.76% (297) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. marinum M | MMAR_4909 | purC | 1e-153 | 87.21% (297) | phosphoribosylaminoimidazole- succinocarboxamide synthase, |
M. avium 104 | MAV_0725 | purC | 1e-153 | 87.46% (295) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. smegmatis MC2 155 | MSMEG_5841 | purC | 1e-135 | 77.52% (298) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. thermoresistible (build 8) | TH_1816 | purC | 1e-131 | 75.42% (301) | PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE |
M. ulcerans Agy99 | MUL_0497 | purC | 1e-154 | 86.87% (297) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
M. vanbaalenii PYR-1 | Mvan_5138 | - | 1e-130 | 75.42% (301) | phosphoribosylaminoimidazole-succinocarboxamide synthase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0803|M.bovis_AF2122/97 MRPALSDYQHVASGKVREIYRVDDEHLLLVASDRISAYDYVLDSTIPDKG Rv0780|M.tuberculosis_H37Rv MRPALSDYQHVASGKVREIYRVDDEHLLLVASDRISAYDYVLDSTIPDKG MMAR_4909|M.marinum_M MRPQLSDYQHLASGKVRELYRVDDEHLLLVASDRISAYDYVLDSMIPDKG MUL_0497|M.ulcerans_Agy99 MRPQLSDYQHLASGKVRELYRVDDEHLLVVASDRISAYDYVLDSMIPDKG MAV_0725|M.avium_104 -MPALSDYQHLVSGKVRELYRVDDEHLLLVATDRISAYDFVLDSTIPDKG MLBr_02227|M.leprae_Br4923 MRPALFDYRHLASGKVREIYRIDDEHLLMVASDRISAFDYVLDSTIPDKG Mflv_1616|M.gilvum_PYR-GCK MRPALSDYQHLASGKVRELYRVDDRHLLFVATDRISAYDFILDSEIPDKG Mvan_5138|M.vanbaalenii_PYR-1 MRPALTDYQHLASGKVRELYRIDGGHLLFVATDRISAYDHILKSEIPDKG TH_1816|M.thermoresistible__bu MRPALSDYQHLASGKVRELYRVDADHLLFVATDRISAYDHVLDTQIPDKG MSMEG_5841|M.smegmatis_MC2_155 MRPALSDYQHLASGKVREIYRIDDEHLLFVASDRISAYDYILDSQIPDKG MAB_0689|M.abscessus_ATCC_1997 MRPSLSDYQHVASGKVRELYRVDDEHLLFVATDRISAFDFVLDTPIPDKG * * **:*:.******:**:* ***.**:*****:*.:*.: ***** Mb0803|M.bovis_AF2122/97 RVLTAMSAFFFGLVD----APNHLAGPPDDPRIPDEVLGRALVVRRLEML Rv0780|M.tuberculosis_H37Rv RVLTAMSAFFFGLVD----APNHLAGPPDDPRIPDEVLGRALVVRRLEML MMAR_4909|M.marinum_M RILTAMSVFFFGLVD----APNHLAGPPDDPRIPDEVLGRALVVCQLEML MUL_0497|M.ulcerans_Agy99 RILTAMSVFFFGLVD----APNHLAGPPDDPRIPDEVLGRALVVRQLEML MAV_0725|M.avium_104 RILTAMSVFFFGLVD----APNHLAGPPDDPRIPDEVLGRALVVRQLEML MLBr_02227|M.leprae_Br4923 RILTAMSVFFFSFVD----APNHLAGPPDDPRIPEEVLGRALVVRQLDML Mflv_1616|M.gilvum_PYR-GCK RVLTAMSVFFFGLVD----SPNHLAGPPDDERIPEEVLGRALVVRQLDML Mvan_5138|M.vanbaalenii_PYR-1 RVLTAMSVFFFDYLSRTAAVSNHLAGPPDDERIPEEVLGRALVVEQLEML TH_1816|M.thermoresistible__bu RILTAMSVFFFDLLEREHGVANHLAGPADDPRIPGEVLGRALVVRELQML MSMEG_5841|M.smegmatis_MC2_155 RILTAMSVFFFDHLLRTAGVPNHLAGPPDDERIPADVLGRALVVRRLDML MAB_0689|M.abscessus_ATCC_1997 RILTAMSVFFFGLLT----VPNHLAGPPDDPRIPEEVLGRALLVRRLDML *:*****.***. : .******.** *** :******:* .*:** Mb0803|M.bovis_AF2122/97 PVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASRFATPLFTPATKA Rv0780|M.tuberculosis_H37Rv PVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASRFATPLFTPATKA MMAR_4909|M.marinum_M PVECVARGYLTGSGLLDYQASGKVCGIALPPGLVEASKFAEPLFTPATKA MUL_0497|M.ulcerans_Agy99 PVECVARGYLTGSGLLDYQASGKVCGIALPPGLVGASKFAEPLFTPATKA MAV_0725|M.avium_104 PVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASKFAEPLFTPATKA MLBr_02227|M.leprae_Br4923 PMECVARGYLTGSGLLDYQATGKVCGIPLPPGLVEASRFAAPLFTPAMKA Mflv_1616|M.gilvum_PYR-GCK PVEAVARGYLTGSGLIDYQKTGSVCGIPLPSGLVEASKFDEPLFTPATKA Mvan_5138|M.vanbaalenii_PYR-1 PVEAVARGYLTGSGLIDYQQTGTVCGIALPSGLVEASRFDEPLFTPATKA TH_1816|M.thermoresistible__bu PVECVARGYLTGSGLIDYQKTGAVCGIPLPPGLVEASKFDEPLFTPATKA MSMEG_5841|M.smegmatis_MC2_155 PVECVARGYLTGSGLIDYEKTGTVCGIALPPGLGEASKFDEPLFTPATKA MAB_0689|M.abscessus_ATCC_1997 PVECVARGYLTGSGLLDYQRTGAVCGHVLPQGLGEASRLDPPLFTPATKA *:*.***********:**: :* *** ** ** **:: ****** ** Mb0803|M.bovis_AF2122/97 ALGDHDENISFDRVVEMVGALRANQLRDRTLQTYVQAADHALTRGIIIAD Rv0780|M.tuberculosis_H37Rv ALGDHDENISFDRVVEMVGALRANQLRDRTLQTYVQAADHALTRGIIIAD MMAR_4909|M.marinum_M ELGDHDENISFAQVIETVGGVRANQLRDRTLQIYVKAADHALTRGIIIAD MUL_0497|M.ulcerans_Agy99 ELGDHDENISFAQVIETVGGVRANQLRDRTLQIYVKAADHALTRGVIIAD MAV_0725|M.avium_104 ALGDHDENISFARVIEMVGGVRANQLRDRTLQIYVQAADHALRKGIIIAD MLBr_02227|M.leprae_Br4923 VLGEHDENISFSRMIEMVGVVRANQLRDRTLQIYLQAADHALKTGIIIAD Mflv_1616|M.gilvum_PYR-GCK DLGEHDVNITYDDVVELIGAERAEQLRERTLAVYQQGADHALSNGIIVAD Mvan_5138|M.vanbaalenii_PYR-1 ELGEHDVNISFDDVVGLIGAERAEELRDRTLRTYSQGAAHALTRGIIVAD TH_1816|M.thermoresistible__bu AQGDHDENITFDDVVALVGGERAEQLRTLTLRTYRAGAEHALRKGIIVAD MSMEG_5841|M.smegmatis_MC2_155 EIGEHDENISFAKVIELVGAELANQLRDRTLQTYTAGADHALSKGIIIAD MAB_0689|M.abscessus_ATCC_1997 DIGEHDMNVDFAAVVGLVGAVRANQLRDETIKIYTRAAAHALHKGIILAD *:** *: : :: :* *::** *: * .* *** *:*:** Mb0803|M.bovis_AF2122/97 TKFEFGIDRHGNLLLADEIFTPDSSRYWPADDYRAGVVQTSFDKQFVRSW Rv0780|M.tuberculosis_H37Rv TKFEFGIDRHGNLLLADEIFTPDSSRYWPADDYRAGVVQTSFDKQFVRSW MMAR_4909|M.marinum_M TKFEFGADRDGNLLLADEIFTPDSSRYWPADEYRAGVVQNSFDKQFVRNW MUL_0497|M.ulcerans_Agy99 TKFEFGADRDGNLLLADEIFTPDSSRYWPADEYRAGVVQNSFDKQFVRNW MAV_0725|M.avium_104 TKFEFGTDPDGNLLLADEIFTPDSSRYWPADEYRVGVPQTSFDKQFVRNW MLBr_02227|M.leprae_Br4923 TKFEFGIDRDGNLLLADEIFTPDSSRYWSVDDYRVGVVQRSFDKQFVRNW Mflv_1616|M.gilvum_PYR-GCK TKFEFGIDADGELTLADEVFTPDSSRYWRADDYAEGQVQNSFDKQFVRNW Mvan_5138|M.vanbaalenii_PYR-1 TKFEFGVDARGELKLADEVFTPDSSRYWRADDYAEGQVQNSFDKQFVRNW TH_1816|M.thermoresistible__bu TKFEFGVDDSGALRLADEVFTPDSSRYWPADSYTEGQVQPSFDKQFVRNW MSMEG_5841|M.smegmatis_MC2_155 TKFEFGVDRDGTVVLADEVFTPDSSRYWRADSYQPGVVQNSFDKQFVRNW MAB_0689|M.abscessus_ATCC_1997 TKFEFGVDIEGNLVLADEVFTPDSSRYWDAAHYQPGVVQDSFDKQFVRNW ****** * * : ****:********* . * * * ********.* Mb0803|M.bovis_AF2122/97 LTGSESGWDRGSDRPPPPLPEHIVEATRARYINAYERISELKFDDWIGPG Rv0780|M.tuberculosis_H37Rv LTGSESGWDRGSDRPPPPLPEHIVEATRARYINAYERISELKFDDWIGPG MMAR_4909|M.marinum_M LTSAESGWDRGGDQPPPPLPDHIIAATRERYIEAYERISGLSFGEWIGPG MUL_0497|M.ulcerans_Agy99 LTSAESGWDRGGDQPPPPLPDHIIEATRERYIEAYERISGLGFGEWIGPG MAV_0725|M.avium_104 LTSPESGWDRHGTEPPPPLPDHIIEATRNRYIEAYERISGLRFDDWIGPR MLBr_02227|M.leprae_Br4923 LVSPESGWVRAGALSPPSLPDDIIEATRLCYVEVYERISGMSFDDWIGPG Mflv_1616|M.gilvum_PYR-GCK LTGPDSGWDRNGDQAPPPLPPDIVAATRARYIEAYERISGLRFDDWIGGA Mvan_5138|M.vanbaalenii_PYR-1 LTGPDSGWDRHGDQPPPPLPPDIVDATRARYIEAYERISGLRFDDWIGVS TH_1816|M.thermoresistible__bu LTSPESGWDRYGDQPPPPLPPHIVNATRERYIEAYERISGLNFDEWIGPS MSMEG_5841|M.smegmatis_MC2_155 LTGPESGWDRHGNTPPPALPDDIVAATRERYIEAYERISGLSFDDWIGA- MAB_0689|M.abscessus_ATCC_1997 LTGPESGWDRASDTPPPPLPDEVAVATRERYIEAYERISGLSFSDWIGPS *...:*** * . .**.** .: *** *::.***** : *.:*** Mb0803|M.bovis_AF2122/97 A Rv0780|M.tuberculosis_H37Rv A MMAR_4909|M.marinum_M A MUL_0497|M.ulcerans_Agy99 A MAV_0725|M.avium_104 A MLBr_02227|M.leprae_Br4923 A Mflv_1616|M.gilvum_PYR-GCK A Mvan_5138|M.vanbaalenii_PYR-1 A TH_1816|M.thermoresistible__bu A MSMEG_5841|M.smegmatis_MC2_155 - MAB_0689|M.abscessus_ATCC_1997 A