For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSFLKTVPEELTAAAAQLGTIGSSMSAQNAAAAAPTTVIAPAALDEVSALQAALFTAYGTYYQQVSADAQ AMHDMFVNTLGASAGTYGATENLNSAAAASPLDGITSGISGFIQNTGSIIPDSWSNNIGNLTNIGVGNWA SASSTLIGLAGGGLLPAEEAAEADVSLGAEAGLGALSELGGAEAALGAPIAAGIGGASAVGMLSVPPTWA GSATLVSSTTPLAGAGWTAAAPTAAPGTFMGVPAGLGSAARNSAGFGAPRYGVKPIVMPKPAAV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4620 | - | - | 100% (274) | PE family protein |
M. ulcerans Agy99 | MUL_3088 | - | 6e-28 | 63.27% (98) | PE family protein |
M. ulcerans Agy99 | MUL_3084 | - | 2e-27 | 63.27% (98) | PE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1069c | PE8 | 1e-115 | 78.18% (275) | PE family protein |
M. gilvum PYR-GCK | Mflv_2152 | - | 6e-07 | 25.58% (215) | hypothetical protein Mflv_2152 |
M. tuberculosis H37Rv | Rv1040c | PE8 | 1e-115 | 78.18% (275) | PE family protein |
M. leprae Br4923 | MLBr_01183 | - | 2e-12 | 40.22% (92) | hypothetical protein MLBr_01183 |
M. abscessus ATCC 19977 | MAB_0664 | - | 1e-08 | 37.25% (102) | PE family protein |
M. marinum M | MMAR_4451 | - | 1e-150 | 99.27% (274) | PE family protein, PE8 |
M. avium 104 | MAV_1346 | - | 2e-52 | 47.20% (286) | PE family protein |
M. smegmatis MC2 155 | MSMEG_0618 | - | 2e-06 | 34.38% (96) | PE family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0414 | - | 7e-07 | 32.98% (94) | PE domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MUL_4620|M.ulcerans_Agy99 -MSFLKTVPEELTAAAAQLGTIGSSMSAQNAAAAAPTTVIAPAALDEVSA MMAR_4451|M.marinum_M -MSFLKTVPEELTAAAAQLGTIGSSMSAQNAAAAAPTTVIAPAALDEVSA Mb1069c|M.bovis_AF2122/97 -MSFLKTVPEELTAAAAQLGTIGAAMAAQNAAAAAPTTAIAPAALDEVSA Rv1040c|M.tuberculosis_H37Rv -MSFLKTVPEELTAAAAQLGTIGAAMAAQNAAAAAPTTAIAPAALDEVSA MSMEG_0618|M.smegmatis_MC2_155 -MT-LRVVPEGLTAASSAVEALTARLAAAHAAAAPMISTVLPPAADAVSL Mvan_0414|M.vanbaalenii_PYR-1 -MT-LRVVPEGLTAAGAAVEALTARMAAAHAAAAPVVTAVLPPAADVVSL MAB_0664|M.abscessus_ATCC_1997 -MS-LNVVPEGLTAASAAVEALTARLAAVNAAAAPVIGAVMPPAADPVSM MLBr_01183|M.leprae_Br4923 MPLFLNAEPQALTAAANTLEGLSAATVASNAAAAQLTTEIAPPAADDVSI MAV_1346|M.avium_104 MS-FVTTRPEALLAVASMLEGLGSSMDAQNAAAAAPTTSIAPAAADEVSA Mflv_2152|M.gilvum_PYR-GCK -----MHRTRKLFATTMFAAAGAVSAAVALSATATAQPAPAPAPAPEVPG .. * *. . :*:* *.. *. MUL_4620|M.ulcerans_Agy99 LQAALFTAYGTYYQQVSADAQAMHDMFVNTLGASAGTYGATENLNSAAAA MMAR_4451|M.marinum_M LQAALFTAYGTYYQQVSADAQAMHDMFVNTLGASAGTYGATENLNSAAAA Mb1069c|M.bovis_AF2122/97 LQAALFTAYGTFYQQVSAEAQAMHDMFVNTLGISAGTYGVTESLNSSAAA Rv1040c|M.tuberculosis_H37Rv LQAALFTAYGTFYQQVSAEAQAMHDMFVNTLGISAGTYGVTESLNSSAAA MSMEG_0618|M.smegmatis_MC2_155 QTAAGFSANGAQQSAVAAQG-------VEELGRSG--VGVGE-----SGV Mvan_0414|M.vanbaalenii_PYR-1 QAATGFSARAAEHQSVAAQG-------VEELGRSG--IAVGE-----SAA MAB_0664|M.abscessus_ATCC_1997 QSAALFSAHGLERTGAGARA-------AYELGRSG--VGATE-----AAA MLBr_01183|M.leprae_Br4923 LLAHFFSGHGRQYQAHASQGATNHQDLIQSLLTSSSAYAGTETAN----- MAV_1346|M.avium_104 LQAAQFSAYGTWYQQVSAQAKAIHQTLVQNLDTNADSYGATEAANRVNTS Mflv_2152|M.gilvum_PYR-GCK LPFLQQLAANPAAATQLMQG------FANLMGTAPAAPAATATAVPATPV . . : . MUL_4620|M.ulcerans_Agy99 SPLDGITSGISGFIQNTGSIIPDSWSNNIGNLTNIGVGNWASASSTLIGL MMAR_4451|M.marinum_M SPLDGITSGISGFIQNAGSIIPDSWSSNIGNLTNIGVGNWASASSTLIGL Mb1069c|M.bovis_AF2122/97 SPLSGITGEASAIIQATTGLFPPELSGGIGNILNIGAGNWASATSTLIGL Rv1040c|M.tuberculosis_H37Rv SPLSGITGEASAIIQATTGLFPPELSGGIGNILNIGAGNWASATSTLIGL MSMEG_0618|M.smegmatis_MC2_155 S---------------------------------YATGDAQAAASYLTAR Mvan_0414|M.vanbaalenii_PYR-1 S---------------------------------YAGGDAMAASSYLIAR MAB_0664|M.abscessus_ATCC_1997 S---------------------------------YTVGDIQAAATYLPGI MLBr_01183|M.leprae_Br4923 -------------------------HDSL--------------------- MAV_1346|M.avium_104 AAALQGLAPNVIPNAAPAADPPPAGTTSLGTSIGWAQNVGAAASDFITLG Mflv_2152|M.gilvum_PYR-GCK T----------------------------------GPGATASITLPQPAN MUL_4620|M.ulcerans_Agy99 AGGGLLPAEEAAEADVSLGAEAGLGALSELGGAEAALGAP-IAAGIGGAS MMAR_4451|M.marinum_M AGGGLLPAEEAAEADVSLGAEAGLGALSELGGAEAALGAP-IAAGIGGAS Mb1069c|M.bovis_AF2122/97 AGGGLLPAEEAAEAASALGGEAALGELGALGAAEAALGEAGIAAGLGSAS Rv1040c|M.tuberculosis_H37Rv AGGGLLPAEEAAEAASALGGEAALGELGALGAAEAALGEAGIAAGLGSAS MSMEG_0618|M.smegmatis_MC2_155 GL------------------------------------------------ Mvan_0414|M.vanbaalenii_PYR-1 G------------------------------------------------- MAB_0664|M.abscessus_ATCC_1997 A------------------------------------------------- MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 EGQFAPVPGAAGIPNFNPGLTAATTAGPPAPAAPAAAAGAPVLASMGRGP Mflv_2152|M.gilvum_PYR-GCK VLPGATALGNGNVTTVPAGNTTTVPQTAPAAPASPLTGLTDQLGMPGGLA MUL_4620|M.ulcerans_Agy99 AVGMLSVPPTWAG---SATLVSSTTPLAGAGWTAAAPTAAPGTFMG-VPA MMAR_4451|M.marinum_M AVGMLSVPPTWAG---SATLVSSTTPLAGAGWTAAAPTAAPGTFMG-VPA Mb1069c|M.bovis_AF2122/97 AIGMLSVPPAWAG---QATLVSTTSTLPGAGWTAAAPQAAAGTFIP-GMP Rv1040c|M.tuberculosis_H37Rv AIGMLSVPPAWAG---QATLVSTTSTLPGAGWTAAAPQAAAGTFIP-GMP MSMEG_0618|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0414|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_0664|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01183|M.leprae_Br4923 -------------------------------------------------- MAV_1346|M.avium_104 SIGGLSVPPSWAPGGVAPAANATPAQLVGAGFTSAAPDTAPVTAVPGGVP Mflv_2152|M.gilvum_PYR-GCK SLLPAGNP--------------LAGLLPGAATTAPATTVAPAAVAPAAAP MUL_4620|M.ulcerans_Agy99 GLGSAARNSAGFGAPRYGVKPIVMPKPAAV MMAR_4451|M.marinum_M GLGSAARNSAGFGAPRYGVKPIVMPKPAAV Mb1069c|M.bovis_AF2122/97 GVASAARNSAGFGAPRYGVKPIVMPKPATV Rv1040c|M.tuberculosis_H37Rv GVASAARNSAGFGAPRYGVKPIVMPKPATV MSMEG_0618|M.smegmatis_MC2_155 ------------------------------ Mvan_0414|M.vanbaalenii_PYR-1 ------------------------------ MAB_0664|M.abscessus_ATCC_1997 ------------------------------ MLBr_01183|M.leprae_Br4923 ------------------------------ MAV_1346|M.avium_104 SMATAGRGGYGLGAPRYGVKPTVMPKPAI- Mflv_2152|M.gilvum_PYR-GCK AVPSMLSPLAALP-----------------