For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VKRVIAAAIGTIGCASALVGCSSGGHSASPASSVSTGGGGTQVQVGGTNLPGLDPASVTCVKQGGKIDIG SGSAGGQQALAVVMTDEATPRVESLALVVDGNAVSVTDNMGAKVGSAKVAVEGKTYTITGQAQGADMKNP MAGMITKDFSIKVTCG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_4320 | - | - | 100% (156) | 19 kDa lipoprotein antigen precursor LpqH-like |
| M. ulcerans Agy99 | MUL_4389 | lpqH | 1e-16 | 36.71% (158) | 19 kDa lipoprotein antigen precursor LpqH |
| M. ulcerans Agy99 | MUL_3169 | - | 4e-05 | 30.07% (143) | PPE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3789 | lpqH | 1e-14 | 34.15% (164) | 19 kDa lipoprotein antigen precursor LPQH |
| M. gilvum PYR-GCK | Mflv_1226 | - | 1e-09 | 31.87% (160) | lipoprotein antigen family protein |
| M. tuberculosis H37Rv | Rv3763 | lpqH | 1e-14 | 34.15% (164) | 19 kDa lipoprotein antigen precursor LPQH |
| M. leprae Br4923 | MLBr_01966 | lpqH | 3e-08 | 27.22% (169) | putative lipoprotein |
| M. abscessus ATCC 19977 | MAB_4074c | - | 3e-43 | 58.78% (148) | lipoprotein LpqH precursor |
| M. marinum M | MMAR_5244 | - | 3e-84 | 99.36% (156) | 19 kDa lipoprotein antigen precursor LpqH-like protein |
| M. avium 104 | MAV_0377 | - | 5e-61 | 77.63% (152) | hypothetical protein MAV_0377 |
| M. smegmatis MC2 155 | MSMEG_3803 | - | 5e-49 | 60.76% (158) | lipoprotein LpqH |
| M. thermoresistible (build 8) | TH_1652 | - | 1e-13 | 31.40% (172) | lipoprotein LpqH |
| M. vanbaalenii PYR-1 | Mvan_3337 | - | 1e-46 | 57.83% (166) | hypothetical protein Mvan_3337 |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_4320|M.ulcerans_Agy99 ------MKRVIAAAIGTIGCASALVGCSSGGHSASPAS------------
MMAR_5244|M.marinum_M -MEGNPVKRVIAAAIGTIGCASALVGCSSGGHSASPAS------------
MAV_0377|M.avium_104 --------------MGCAAAAVTLVGCSSGGHSAAPAS------------
MAB_4074c|M.abscessus_ATCC_199 --------------MGLLAAGAVVVGCSNDKP------------------
MSMEG_3803|M.smegmatis_MC2_155 ------MNRVIAGTMGLLAAGTILVGCSDDKPQATPS-------------
Mvan_3337|M.vanbaalenii_PYR-1 MDGKSAMKRVGAGVIGLAASAAVLVGCSDDKSGPSPSPSESSQSS-----
Mb3789|M.bovis_AF2122/97 -----MKRGLTVAVAGAAILVAGLSGCSSNKS-TTGSGETTTAAG-----
Rv3763|M.tuberculosis_H37Rv -----MKRGLTVAVAGAAILVAGLSGCSSNKS-TTGSGETTTAAG-----
Mflv_1226|M.gilvum_PYR-GCK -----MNRHFVVALGGAALVIAGLSGCGGSDK-----SETTG--------
TH_1652|M.thermoresistible__bu -----MYRGLLAAIGGAALVVAGLAGCSSNDEGSTAADETTTGEAVDEVI
MLBr_01966|M.leprae_Br4923 -----MRHKLLAAIY-AVTIMAGAAGCSGGTQAPTPSVSKTTNSS-----
**...
MUL_4320|M.ulcerans_Agy99 ------SVS---TGGGGTQVQVGGTNLPGLDPASVTCVKQGGKIDIGSGS
MMAR_5244|M.marinum_M ------SVS---TGGGGTQVQVGGTNLPGLDPASVTCVKQGGKIDIGSGS
MAV_0377|M.avium_104 ------STAPSASTGTNAQVKVGGADLPGVNPASVTCVRTGGKIDIGSGS
MAB_4074c|M.abscessus_ATCC_199 ------AGAAQVSSGSNAEVKVDGKDLAGLDLKSVTCVKQGGNINVASAA
MSMEG_3803|M.smegmatis_MC2_155 ------PAAADVKTGGNTQVKVDGKDLPGLDLNSVTCVKEGGRINVGSAA
Mvan_3337|M.vanbaalenii_PYR-1 -----AAAAPQASTGGKTEVKVDGADLAGLDLNSVTCVKQGGKINVASGA
Mb3789|M.bovis_AF2122/97 ------TTASPGAASG-PKVVIDGKDQN--VTGSVVCTTAAGNVNIAIGG
Rv3763|M.tuberculosis_H37Rv ------TTASPGAASG-PKVVIDGKDQN--VTGSVVCTTAAGNVNIAIGG
Mflv_1226|M.gilvum_PYR-GCK ------ETSSAAAAEGKSTVTIDGADQE--VTGTVVCSDMGGNTNIAIGD
TH_1652|M.thermoresistible__bu VEEEEETTTTGAAAEGAATVSIDGQEQE--IQGTVACTQTGDTVMIAIGD
MLBr_01966|M.leprae_Br4923 --PTTVASSIPDAAAGETKVTIGGQPQK--VSGPVVCSTTNGKFSIAIGD
: . * :.* .*.* . :. .
MUL_4320|M.ulcerans_Agy99 AGG-QQALAVVMTDEATPRVESLALVVDGNAVSVTDNMGAKVGSAKVAVE
MMAR_5244|M.marinum_M AGG-QQALAVVMTDEATPRVESLALVVDGNALSVTDNMGAKVGSAKVAVE
MAV_0377|M.avium_104 TGGAQQALAVVLTDEATPKVESLALVVDGNALAVSNNMGAKVGSADVAVD
MAB_4074c|M.abscessus_ATCC_199 ING-QQGLGVVMTDEATPKVTSLGLVYDGAALAVSEGMGAKVGSADVKVD
MSMEG_3803|M.smegmatis_MC2_155 IGG-QQGLGVVMTDEASPKVESLGLVYDGSALAVSENMGVKVGSAKVEVD
Mvan_3337|M.vanbaalenii_PYR-1 IGG-QQGLGIVMTDEATPVVESLGMVVDGNALAVANAMGAKSGSAEVKVD
Mb3789|M.bovis_AF2122/97 AAT---GIAAVLTDGNPPEVKSVGLG-NVNGVTLGYTSGTGQGNASATKD
Rv3763|M.tuberculosis_H37Rv AAT---GIAAVLTDGNPPEVKSVGLG-NVNGVTLGYTSGTGQGNASATKD
Mflv_1226|M.gilvum_PYR-GCK ATT---GIGAVVSTGDEPTLVSVGLG-NVNGVTLGYQSGTGSNDGKVEKD
TH_1652|M.thermoresistible__bu ATQ---GISATVSTGDEPQVSQVALG-NVDGVALTYQEGTGQGEAAAEKD
MLBr_01966|M.leprae_Br4923 MIT---GVIVGLEP-DASVVHNAGLG-TIDGVVIAFTEGVPSENANATKN
.: : . : . .: .: : *. .. . :
MUL_4320|M.ulcerans_Agy99 GKTYTITGQAQGADMKNPMAGMITKDFSIKVTCG--
MMAR_5244|M.marinum_M GKTYTITGQAQGADMKNPMAGMITKDFSIKVTCG--
MAV_0377|M.avium_104 GKTYTITGQAQGADMKNPMAGMITKDFSIKVSCG--
MAB_4074c|M.abscessus_ATCC_199 GKTYTITGEASGADVKNPMAGMITKPFTIKVSCG--
MSMEG_3803|M.smegmatis_MC2_155 GDTYTITGEAAGADMQNPMAGMISKPFTITVSCS--
Mvan_3337|M.vanbaalenii_PYR-1 GDTYTITGEAVGADMSNPMAGMITKPFTVTVSCS--
Mb3789|M.bovis_AF2122/97 GSHYKITGTATGVDMANP-MSPVNKSFEIEVTCS--
Rv3763|M.tuberculosis_H37Rv GSHYKITGTATGVDMANP-MSPVNKSFEIEVTCS--
Mflv_1226|M.gilvum_PYR-GCK DKTYKISGTATGVDMANP-MQPVNKPFEIEVTCP--
TH_1652|M.thermoresistible__bu GDTYKITGTATGADIADPGAGMVSKPFEIEVTCPGS
MLBr_01966|M.leprae_Br4923 GNTYQITGTASGVDNTGQ---QIHKSFEIEVTCR--
.. * *:* * *.* . : * * : *:*