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M. ulcerans Agy99 MUL_3025 (ndh)

annotation: NADH dehydrogenase Ndh
coordinates: 3350490 - 3351875
length: 461

MSPQPETTAQARPRHRVVIIGSGFGGLNAAKKLKRADVDIKLIARTTHHLFQPLLYQVATGIISEGDIAP
PTRVVLRRQRNAQVLLGNVTHIDLAKQSVVSDLLGHTYETPYDTLIVAAGAGQSYFGNDHFAEFAPGMKS
IDDALELRGRILSAFEQAERSRDAERRAKLLTFTVVGAGPTGVEMAGQIAELAEHTLKGAFRHIDSTRAR
VILLDAAPAVLPPFGDKLGERAAARLQKLGVEIQLGAMVTDVDRNGITVKDSDGTIRRIESACKVWSAGV
QASRLGRDLAEQSEVELDRAGRVQVLPDLSVPGHPNVFVIGDMAAVEGVPGVAQGAIQGAKYVATTIKSE
LAGANAAEREPFQYFDKGSMATVSRFSAVAKIGPVEISGFIAWLAWLVLHLVYLVGFKTKVSTLLSWTVT
FLSTRRGQLTITEQQAFARTRLEQLAELASEAQSTEARQAS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. ulcerans Agy99MUL_3025ndh-100% (461)NADH dehydrogenase Ndh
M. ulcerans Agy99MUL_3068-1e-2031.08% (325) NADH dehydrogenase
M. ulcerans Agy99MUL_4658-2e-1628.16% (348) dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1885cndh0.091.25% (457) NADH dehydrogenase
M. gilvum PYR-GCKMflv_3348-0.081.72% (443) FAD-dependent pyridine nucleotide-disulphide oxidoreductase
M. tuberculosis H37RvRv1854cndh0.091.47% (457) NADH dehydrogenase
M. leprae Br4923MLBr_02061-0.086.87% (457) putative dehydrogenase
M. abscessus ATCC 19977MAB_2429c-0.075.60% (455) NADH dehydrogenase (NDH)
M. marinum MMMAR_2728ndh0.0100.00% (461) NADH dehydrogenase Ndh
M. avium 104MAV_2867-0.088.29% (461) DoxD family protein/pyridine nucleotide-disulfide
M. smegmatis MC2 155MSMEG_3621ndh0.081.70% (448) NADH dehydrogenase
M. thermoresistible (build 8)TH_1173ndh0.081.76% (444) PROBABLE NADH DEHYDROGENASE NDH
M. vanbaalenii PYR-1Mvan_3078-0.083.52% (443) FAD-dependent pyridine nucleotide-disulphide oxidoreductase

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3348|M.gilvum_PYR-GCK          ------------------MSHPGATPSDRHKVVIIGSGFGGLTAAKALKK
Mvan_3078|M.vanbaalenii_PYR-1       ------------------MSHPGATPSDRHKVVIIGSGFGGLTAAKTLKR
MSMEG_3621|M.smegmatis_MC2_155      ------------------MSHPGATASDRHKVVIIGSGFGGLTAAKTLKR
TH_1173|M.thermoresistible__bu      -------------------------MSDRHKVVIIGSGFGGLNAAKALRR
Mb1885c|M.bovis_AF2122/97           ---------------MSPQQEPTAQPPRRHRVVIIGSGFGGLNAAKKLKR
Rv1854c|M.tuberculosis_H37Rv        ---------------MSPQQEPTAQPPRRHRVVIIGSGFGGLNAAKKLKR
MLBr_02061|M.leprae_Br4923          ---------------MNAQPAATAAQDRRHQVVIIGSGFGGLNAAKKLKR
MUL_3025|M.ulcerans_Agy99           ---------------MSPQPETTAQARPRHRVVIIGSGFGGLNAAKKLKR
MMAR_2728|M.marinum_M               ---------------MSPQPETTAQARPRHRVVIIGSGFGGLNAAKKLKR
MAV_2867|M.avium_104                ---------------MSPHSGSTAGPERRHQVVIIGSGFGGLNAAKKLKH
MAB_2429c|M.abscessus_ATCC_199      MSTTPDAAGAAAPVAANPQPKIQDALTPKHRVVIIGSGFGGLTAAKTLKR
                                                                :*:***********.*** *::

Mflv_3348|M.gilvum_PYR-GCK          ADVDIKMIARTTHHLFQPLLYQVATGIISEGEIAPATRVILRNQKNAQVL
Mvan_3078|M.vanbaalenii_PYR-1       ADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPATRVILRNQKNAQVL
MSMEG_3621|M.smegmatis_MC2_155      ADVDVKLIARTTHHLFQPLLYQVATGIISEGEIAPATRVILRKQKNAQVL
TH_1173|M.thermoresistible__bu      ADVDVKLIARTTHHLFQPLLYQVATGIISEGEIAPATRVVLRRQRNVQVL
Mb1885c|M.bovis_AF2122/97           ADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTRVVLRKQRNVQVL
Rv1854c|M.tuberculosis_H37Rv        ADVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTRVVLRKQRNVQVL
MLBr_02061|M.leprae_Br4923          ANVDIKLIARTTHHLFQPLLYQVATGIISEGEIAPPTRVVLRKQRNIQVL
MUL_3025|M.ulcerans_Agy99           ADVDIKLIARTTHHLFQPLLYQVATGIISEGDIAPPTRVVLRRQRNAQVL
MMAR_2728|M.marinum_M               ADVDIKLIARTTHHLFQPLLYQVATGIISEGDIAPPTRVVLRRQRNAQVL
MAV_2867|M.avium_104                ANVDIKLIARTTHHLFQPLLYQVATGIVSEGDIAPPTRVVLRRQRNVQVL
MAB_2429c|M.abscessus_ATCC_199      ANADVTLIARTTHHLFQPLLYQVATGIISEGEIAPPTRQILKDQDNAQVV
                                    *:.*:.:********************:***:***.** :*: * * **:

Mflv_3348|M.gilvum_PYR-GCK          LGDVTRIDLKTNTVRSELLGHTYITPFDSLIVAAGAGQSYFGNDHFAEWA
Mvan_3078|M.vanbaalenii_PYR-1       LGDVTGIDLQTKTVRSELLGHTYVTPFDSLIVAAGAGQSYFGNDHFAEWA
MSMEG_3621|M.smegmatis_MC2_155      LGDVTHIDLENKTVDSVLLGHTYSTPYDSLIIAAGAGQSYFGNDHFAEFA
TH_1173|M.thermoresistible__bu      LGDVTRIDLTNRRVESVLLGHTYSTPYDSLIVAAGAGQSYFGNDHFAEFA
Mb1885c|M.bovis_AF2122/97           LGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAEFA
Rv1854c|M.tuberculosis_H37Rv        LGNVTHIDLAGQCVVSELLGHTYQTPYDSLIVAAGAGQSYFGNDHFAEFA
MLBr_02061|M.leprae_Br4923          LGNVTHIDLANQCVVSELLGHTYETLYDSLIVAAGAGQSYFGNDQFAEFA
MUL_3025|M.ulcerans_Agy99           LGNVTHIDLAKQSVVSDLLGHTYETPYDTLIVAAGAGQSYFGNDHFAEFA
MMAR_2728|M.marinum_M               LGNVTHIDLAKQSVVSDLLGHTYETPYDTLIVAAGAGQSYFGNDHFAEFA
MAV_2867|M.avium_104                LGDVTHIDLAGKFVVSDLLGHTYETPYDTLIVAAGAGQSYFGNDHFAEFA
MAB_2429c|M.abscessus_ATCC_199      LGDVTSIDLEKQVVHSSLLGHDYSTPYDSLIVAAGAGQSYFGNDHFAEWA
                                    **:** ***  . * * **** * * :*:**:************:***:*

Mflv_3348|M.gilvum_PYR-GCK          PGMKSIDDALELRGRILGSFEQAERSSDPARREKLLTFVVVGAGPTGVEM
Mvan_3078|M.vanbaalenii_PYR-1       PGMKSIDDALELRGRILGAFEQAERSSDPARREKLLTFVVVGAGPTGVEM
MSMEG_3621|M.smegmatis_MC2_155      PGMKSIDDALELRGRILGAFEQAERSSDPVRRAKLLTFTVVGAGPTGVEM
TH_1173|M.thermoresistible__bu      PGMKTIDDALELRARILGAFEQAERSSDAKRREKLLTFTVVGAGPTGVEM
Mb1885c|M.bovis_AF2122/97           PGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEM
Rv1854c|M.tuberculosis_H37Rv        PGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPTGVEM
MLBr_02061|M.leprae_Br4923          PGMKSIDDALELRGRILSAFEQAERSNDPERREKLLTFTVVGAGPTGVEM
MUL_3025|M.ulcerans_Agy99           PGMKSIDDALELRGRILSAFEQAERSRDAERRAKLLTFTVVGAGPTGVEM
MMAR_2728|M.marinum_M               PGMKSIDDALELRGRILSAFEQAERSRDAERRAKLLTFTVVGAGPTGVEM
MAV_2867|M.avium_104                PGMKSIDDALEVRGRILSAFEQAERSRDPERRAKLLTFTVIGAGPTGVEM
MAB_2429c|M.abscessus_ATCC_199      PGMKSIDDALELRGRILGAFEQAERSSDPVRRRKLMTFTVVGAGPTGVEM
                                    ****:******:*.***.:******* *. ** **:**.*:*********

Mflv_3348|M.gilvum_PYR-GCK          AGQIAELADHTLKGAFRHIDS-TKARVILLDAAPAVLPPMGEKLGKQAQK
Mvan_3078|M.vanbaalenii_PYR-1       AGQIAELADHTLKGAFRHIDS-TKARVILLDAAPAVLPPMGEKLGKKAQA
MSMEG_3621|M.smegmatis_MC2_155      AGQIAELADQTLRGSFRHIDP-TEARVILLDAAPAVLPPMGEKLGKKARA
TH_1173|M.thermoresistible__bu      AGQIAELAKYTLKGTFRSIDPATEARVILLDAAPAVLPTMGEKLGKKAQA
Mb1885c|M.bovis_AF2122/97           AGQIAELAEHTLKGAFRHIDS-TKARVILLDAAPAVLPPMGAKLGQRAAA
Rv1854c|M.tuberculosis_H37Rv        AGQIAELAEHTLKGAFRHIDS-TKARVILLDAAPAVLPPMGAKLGQRAAA
MLBr_02061|M.leprae_Br4923          AGQIAELADHTLKGAFRRIDS-TKARVVLLDAAPAVLPPMGEKLGQRAAA
MUL_3025|M.ulcerans_Agy99           AGQIAELAEHTLKGAFRHIDS-TRARVILLDAAPAVLPPFGDKLGERAAA
MMAR_2728|M.marinum_M               AGQIAELAEHTLKGAFRHIDS-TRARVILLDAAPAVLPPFGDKLGERAAA
MAV_2867|M.avium_104                AGQIAELATYTLKGSFRHIDP-TKARVILLDAAPAVLPPFGDKLGKRAAD
MAB_2429c|M.abscessus_ATCC_199      AGQIAELANETLKGTFRHIDP-TDARVILLDAAPAVLPPFGPKLGDKARK
                                    ********  **:*:** **. * ***:**********.:* ***.:*  

Mflv_3348|M.gilvum_PYR-GCK          RLEKMGVEIQLNAMVTDVDRNGITVKDPDGTMRRIEAACKVWSAGVSASP
Mvan_3078|M.vanbaalenii_PYR-1       RLEKLGVEIQLNAMVTDVDRNGITVKDPDGTIRRIEAACKVWSAGVSASP
MSMEG_3621|M.smegmatis_MC2_155      RLEKMGVEVQLGAMVTDVDRNGITVKDSDGTIRRIESACKVWSAGVSASP
TH_1173|M.thermoresistible__bu      RLEKMGVEIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASP
Mb1885c|M.bovis_AF2122/97           RLQKLGVEIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASW
Rv1854c|M.tuberculosis_H37Rv        RLQKLGVEIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASR
MLBr_02061|M.leprae_Br4923          RLQKMGVEIQLSAMVTDVDRNGITVQDSDGTVRRIESACKVWSAGVSASR
MUL_3025|M.ulcerans_Agy99           RLQKLGVEIQLGAMVTDVDRNGITVKDSDGTIRRIESACKVWSAGVQASR
MMAR_2728|M.marinum_M               RLQKLGVEIQLGAMVTDVDRNGITVKDSDGTIRRIESACKVWSAGVQASR
MAV_2867|M.avium_104                RLEKMGVEIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASP
MAB_2429c|M.abscessus_ATCC_199      RLEKLGVEIQLSAMVTDVDRNGLTVKHADGSIERIESWCKVWSAGVSASP
                                    **:*:***:**.**********:**:..**::.***: ********.** 

Mflv_3348|M.gilvum_PYR-GCK          LGRDLADQSGVELDRAGRVKVLPDLSIPGHPNVFVVGDMAAVEDVPGMAQ
Mvan_3078|M.vanbaalenii_PYR-1       LGRDLAEGSGVELDRAGRVKVLPDLSLPGHPNVFVVGDMAAVEGVPGMAQ
MSMEG_3621|M.smegmatis_MC2_155      LGKDLAEQSGVELDRAGRVKVQPDLTLPGHPNVFVVGDMAAVEGVPGVAQ
TH_1173|M.thermoresistible__bu      LGKDLAEQSGAELDRAGRVKVLPDLSLPGHPNVFVVGDMAAVEGVPGMAQ
Mb1885c|M.bovis_AF2122/97           LGRDLAEQSRVELDRAGRVQVLPDLSIPGYPNVFVVGDMAAVEGVPGVAQ
Rv1854c|M.tuberculosis_H37Rv        LGRDLAEQSRVELDRAGRVQVLPDLSIPGYPNVFVVGDMAAVEGVPGVAQ
MLBr_02061|M.leprae_Br4923          LGRDLAEQSLVELDWAGRVKVLPDLSIPGYRNVFVVGDMAAIDGVPGVAQ
MUL_3025|M.ulcerans_Agy99           LGRDLAEQSEVELDRAGRVQVLPDLSVPGHPNVFVIGDMAAVEGVPGVAQ
MMAR_2728|M.marinum_M               LGRDLAEQSEVELDRAGRVQVLPDLSVPGHPNVFVIGDMAAVEGVPGVAQ
MAV_2867|M.avium_104                LGRDLAEQSTVELDRAGRVKVLPDLSIPGHPNVFVIGDLAAVEGVPGVAQ
MAB_2429c|M.abscessus_ATCC_199      LGKNLAEQSGVELDRAGRVKVGPDLSIPGHPNVFVVGDMMAVDGVPGVAQ
                                    **::**: * .*** ****:* ***::**: ****:**: *::.***:**

Mflv_3348|M.gilvum_PYR-GCK          GAIQGGRYAAKAIAAGLKGAEVSEREPFKYFDKGSMATVSRFSAVAKIGP
Mvan_3078|M.vanbaalenii_PYR-1       GAIQGGKYAAKAIAAGLKGADPTEREPFKYFDKGSMATVSRFSAVAKIGP
MSMEG_3621|M.smegmatis_MC2_155      GAIQGGRYAAKIIKREVSGTSPKIRTPFEYFDKGSMATVSRFSAVAKVGP
TH_1173|M.thermoresistible__bu      GAIQGARHAAKLIKNELKGADPADREPFQYFDKGSMATVSRFSAVAKIGP
Mb1885c|M.bovis_AF2122/97           GAIQGAKYVASTIKAELAGANPAEREPFQYFDKGSMATVSRFSAVAKIGP
Rv1854c|M.tuberculosis_H37Rv        GAIQGAKYVASTIKAELAGANPAEREPFQYFDKGSMATVSRFSAVAKIGP
MLBr_02061|M.leprae_Br4923          GAIQGAKYVANNIKAELGEANPAEREPFQYFDKGSMATVSRFSAVAKIGP
MUL_3025|M.ulcerans_Agy99           GAIQGAKYVATTIKSELAGANAAEREPFQYFDKGSMATVSRFSAVAKIGP
MMAR_2728|M.marinum_M               GAIQGAKYVATTIKSELAGANAAEREPFQYFDKGSMATVSRFSAVAKIGP
MAV_2867|M.avium_104                GAIQGAKYVANTIKAELGGADPAEREPFQYFDKGSMATVSRFSAVAKIGP
MAB_2429c|M.abscessus_ATCC_199      GAIQGGRYAAKQIKAELKGRSPAERAPFKFFDKGSMATVSRYSAVVKIGK
                                    *****.::.*. *   :   .   * **::***********:***.*:* 

Mflv_3348|M.gilvum_PYR-GCK          LEFGGFIAWLSWLVLHLVYLVGFKTKIVTLLSWTVTFLSTKRGQLTITEQ
Mvan_3078|M.vanbaalenii_PYR-1       LEFEGFVAWLAWLVLHLVYLVGFKTKIVTLLSWTVTFLSTKRGQLTITEQ
MSMEG_3621|M.smegmatis_MC2_155      VEFAGFFAWLCWLVLHLVYLVGFKTKIVTLLSWGVTFLSTKRGQLTITEQ
TH_1173|M.thermoresistible__bu      LEFGGFIAWLAWLFLHLVYIVGFKARLTTALSWIVTFLGSHRGQLTITEQ
Mb1885c|M.bovis_AF2122/97           VEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTITDQ
Rv1854c|M.tuberculosis_H37Rv        VEFSGFIAWLIWLVLHLAYLIGFKTKITTLLSWTVTFLSTRRGQLTITDQ
MLBr_02061|M.leprae_Br4923          LEFSGFIAWLMWLVLHLMYLIGFKTKITTLLSWTVTFLSTRRGQLTITEQ
MUL_3025|M.ulcerans_Agy99           VEISGFIAWLAWLVLHLVYLVGFKTKVSTLLSWTVTFLSTRRGQLTITEQ
MMAR_2728|M.marinum_M               VEISGFIAWLAWLVLHLVYLVGFKTKVSTLLSWTVTFLSTRRGQLTITEQ
MAV_2867|M.avium_104                LEFSGLFAWFAWLVLHLVYLVGFKTKVSTLLSWTVTFLSTRRGQLTITEQ
MAB_2429c|M.abscessus_ATCC_199      IEFSGFIAWLSWLALHLVYLVGFKNRLVTLILWSIAFVTRSRGQMAITEQ
                                    :*: *:.**: ** *** *::*** :: * : * ::*:   ***::**:*

Mflv_3348|M.gilvum_PYR-GCK          QAYARIRLEELEEIAASVQDTEKAAS---------
Mvan_3078|M.vanbaalenii_PYR-1       QAYARTRIEELEEIAASVQETERAAS---------
MSMEG_3621|M.smegmatis_MC2_155      QAYARTRIEELEEIAAAVQDTEKAAS---------
TH_1173|M.thermoresistible__bu      QAFARTRIEELQEIAASVQDTQKAAS---------
Mb1885c|M.bovis_AF2122/97           QAFARTRLEQLAELAAEAQGSAASAKVAS------
Rv1854c|M.tuberculosis_H37Rv        QAFARTRLEQLAELAAEAQGSAASAKVAS------
MLBr_02061|M.leprae_Br4923          QAFARTRLEQLAELTAESQSTAAANRATMRAS---
MUL_3025|M.ulcerans_Agy99           QAFARTRLEQLAELASEAQSTEARQAS--------
MMAR_2728|M.marinum_M               QAFARTRLEQLAELASEAQSTEARQAS--------
MAV_2867|M.avium_104                QAFARTRLEQLAVLAAETKRPAARRAS--------
MAB_2429c|M.abscessus_ATCC_199      QAWARTRLDQLEELVAEKNGDEEPTTQPDKEKAAS
                                    **:** *:::*  :.:  :