For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSSTNKLANWELRARFAAGLSAMYAGEVPAYSTLVDVTAEVNRGCVAAHSGAERLGSLQRVTAERHGAIR VGSPAELAAVADLFAAFGMFAVGFYDLRSARSPIPVVSTAFRPIDAEELANNPFRVFNSMLATGDSRFFD SGLRARVLTFLGRRQLFDPALLAQARVIAAEGGCDAAQAPDFVAKAVAAFALSREPIDKAWYDELSRVSA VAADIAEVGSTHINHLTPRVLDIDDLYARMTGRGITMIEAIQGPPRTVGPAVLLRQTSFRALAEPRLFRG ADGTVTEGSLRVRFGEVEARGVALTRRGRERYDAAMARLAGAGDPATIWSNHFPATDAEMAAQGLAYYRG GDPSAPIVYEDFLPASAAGIFRSNLDGDTRTGQAAGAVDSDPAYHVGWLAGAIDRDIYDPYSLYDALATE RAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2646 | - | - | 100% (423) | hypothetical protein MUL_2646 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3320 | - | 0.0 | 77.78% (423) | hypothetical protein Mb3320 |
M. gilvum PYR-GCK | Mflv_4798 | - | 1e-153 | 70.59% (408) | hypothetical protein Mflv_4798 |
M. tuberculosis H37Rv | Rv3292 | - | 0.0 | 77.78% (423) | hypothetical protein Rv3292 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3648 | - | 1e-151 | 66.74% (427) | hypothetical protein MAB_3648 |
M. marinum M | MMAR_1241 | - | 0.0 | 97.40% (423) | hypothetical protein MMAR_1241 |
M. avium 104 | MAV_4264 | - | 1e-165 | 74.33% (409) | hypothetical protein MAV_4264 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1644 | - | 1e-155 | 69.27% (410) | hypothetical protein Mvan_1644 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4798|M.gilvum_PYR-GCK --MAEFVESCELRAQFAAGLSRMYGAEVPAYHTLVEVSSLVN---TASPG Mvan_1644|M.vanbaalenii_PYR-1 --MCS-VETWQLRAQFAAGLSQMYGAEVPAYHTLVDVSSAVNAAYAAASP MUL_2646|M.ulcerans_Agy99 MSSTNKLANWELRARFAAGLSAMYAGEVPAYSTLVDVTAEVNRGCVAAHS MMAR_1241|M.marinum_M MSSTNKLATWELRARFAAGLSAMYAGEVPAYSTLVDVTAEVNRDYVAAHP Mb3320|M.bovis_AF2122/97 MSRSKRLQTGQLRARFAAGLSAMYAAEVPAYGTLVEVCAQVNSDYLTRHR Rv3292|M.tuberculosis_H37Rv MSRSKRLQTGQLRARFAAGLSAMYAAEVPAYGTLVEVCAQVNSDYLTRHR MAV_4264|M.avium_104 --------------MFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHP MAB_3648|M.abscessus_ATCC_1997 --MTALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHP **..** **. ***.* ***:* : ** : Mflv_4798|M.gilvum_PYR-GCK -ALRLGSLERVTAERHGAIRVGSAAELAQVADLFSAFGMYPVGYYDLREA Mvan_1644|M.vanbaalenii_PYR-1 -ALRLGSLERVTAERHGAIRVGSAAELAQVADLFSAFGMHPVGFYDLREA MUL_2646|M.ulcerans_Agy99 GAERLGSLQRVTAERHGAIRVGSPAELAAVADLFAAFGMFAVGFYDLRSA MMAR_1241|M.marinum_M GAERLGSLQRVTAERHGAIRVGSPAELAAVADLFAAFGMFAVGFYDLRSA Mb3320|M.bovis_AF2122/97 RAERLGSLQRVTAERHGAIRVGNPAELAAVADLFAAFGMLPVGYYDLRTA Rv3292|M.tuberculosis_H37Rv RAERLGSLQRVTAERHGAIRVGNPAELAAVADLFAAFGMLPVGYYDLRTA MAV_4264|M.avium_104 DAERWGSLRRVTAERHGAIRVGSPAELRAVADLFAAFGMAPVGYYDLRRA MAB_3648|M.abscessus_ATCC_1997 DAERLGSIQRVTAERHGAIRVGSPRELAAVADLFEAFGMYPVDFYDLRDA * * **:.*************.. ** ***** **** .*.:**** * Mflv_4798|M.gilvum_PYR-GCK ASPIPVVSTAFRPIGQDELARNPFRVFTSMLTVADGRFFSADLRTRVQRF Mvan_1644|M.vanbaalenii_PYR-1 ASPVPVVSTAFRPVDPDELARNPFRVFTSMLASADIRFFTADLRGRVERF MUL_2646|M.ulcerans_Agy99 RSPIPVVSTAFRPIDAEELANNPFRVFNSMLATGDSRFFDSGLRARVLTF MMAR_1241|M.marinum_M RSPIPVVSTAFRPIDAEELANNPFRVFTSMLATGDSRFFDSGLRARVLTF Mb3320|M.bovis_AF2122/97 ESPIPVVSTAFRPIDANELAHNPFRVFTSMLAIEDRRYFDADLRTRVQTF Rv3292|M.tuberculosis_H37Rv ESPIPVVSTAFRPIDANELAHNPFRVFTSMLAIEDRRYFDADLRTRVQTF MAV_4264|M.avium_104 ASPIPVVCTAFRPVDGNELSLNPFRMFTSMLATRDRRYFDRDLRARVDNF MAB_3648|M.abscessus_ATCC_1997 ASPVPVVSTAFRPIDENELALNPFRVFTSMLATADRRFFDPDLRGRVENF **:***.*****:. :**: ****:*.***: * *:* .** ** * Mflv_4798|M.gilvum_PYR-GCK LDSRQLFDPALIASAQRIAAAGGCPAGDAPGFVTAAVSAFALSREPIDRA Mvan_1644|M.vanbaalenii_PYR-1 VAGRQLFDPGLIASAHLIAAAGGCPADEAADFVAAAVSAFALSREPIDRA MUL_2646|M.ulcerans_Agy99 LGRRQLFDPALLAQARVIAAEGGCDAAQAPDFVAKAVAAFALSREPIDKA MMAR_1241|M.marinum_M LGRRQLFDPALLAQARVIAAEGGCDAAQAPDFVAKAVAAFALSREPIDKA Mb3320|M.bovis_AF2122/97 LARRQLFDPALLAQARAIAADGGCDADDAPAFVAAAVAAFALSREPVEKS Rv3292|M.tuberculosis_H37Rv LARRQLFDPALLAQARAIAADGGCDADDAPAFVAAAVAAFALSREPVEKS MAV_4264|M.avium_104 LAHRQLFDPALLARARSIAAAGGCADDAARPFVAAAVASFALSGKPIERS MAB_3648|M.abscessus_ATCC_1997 VRQRELFDPALLAHARLISAAGGSTPAQADDFIAEAVNAFALSSAPIDRA : *:****.*:* *: *:* **. * *:: ** :**** *:::: Mflv_4798|M.gilvum_PYR-GCK WYDELSAVSAVAADIAGVTSTHINHLTPRVLDIDALQQAMTERGITMIDR Mvan_1644|M.vanbaalenii_PYR-1 WYDELAAVSAVAADIAGVTSTHINHLTPRVLDIDELQRAMTERGITMIDH MUL_2646|M.ulcerans_Agy99 WYDELSRVSAVAADIAEVGSTHINHLTPRVLDIDDLYARMTGRGITMIEA MMAR_1241|M.marinum_M WYDELSRVSAVAADIAGVGSTHINHLTPRVLDIDDLYARMTGRGITMIEA Mb3320|M.bovis_AF2122/97 WYDELSRVSAVAADIAGVGSTHINHLTPRVLDIDDLYRRMTERGITMIDT Rv3292|M.tuberculosis_H37Rv WYDELSRVSAVAADIAGVGSTHINHLTPRVLDIDDLYRRMTERGITMIDT MAV_4264|M.avium_104 WYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRMTGRGIAMIDA MAB_3648|M.abscessus_ATCC_1997 WYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTARGVTMIEA *****: **.****** * **:*********** * ** **::**: Mflv_4798|M.gilvum_PYR-GCK IQGPPRVDGPQVLLRQTSFRALAEPRRFRSPSGEVTDGTLRVRFGEVEQR Mvan_1644|M.vanbaalenii_PYR-1 IQGPPRVSGPQVLLRQTSFRALAEPRRFRTPSGEVVDGTLRVRFGEVEQR MUL_2646|M.ulcerans_Agy99 IQGPPRTVGPAVLLRQTSFRALAEPRLFRGADGTVTEGSLRVRFGEVEAR MMAR_1241|M.marinum_M IQGPPRTVGPAVLLRQTSFRALAEPRRFRGADGTVTEGSLRVRFGEVEAR Mb3320|M.bovis_AF2122/97 IQGPPRTDGPDVLLRQTSFRALAEPRMFRDEDGTVTPGILRVRFGEVEAR Rv3292|M.tuberculosis_H37Rv IQGPPRTDGPDVLLRQTSFRALAEPRMFRDEDGTVTPGILRVRFGEVEAR MAV_4264|M.avium_104 IQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEAR MAB_3648|M.abscessus_ATCC_1997 IQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEAR ***** ** *************** ** .* : . :******** * Mflv_4798|M.gilvum_PYR-GCK GVALTRAGRERYDAAMS--------APDPAAVWHRHFPATDAEMAASGLA Mvan_1644|M.vanbaalenii_PYR-1 GIALTPLGRSHYDAAMA--------CADPSAVWGEHFPATDAEMAASGLA MUL_2646|M.ulcerans_Agy99 GVALTRRGRERYDAAMARLA----GAGDPATIWSNHFPATDAEMAAQGLA MMAR_1241|M.marinum_M GVALTRRGRERYDAAMARLA----GAGDPATIWSDHFPATDAEMAAQGLA Mb3320|M.bovis_AF2122/97 GVALTPRGRERYEAAMA--------AADPAAVWATHFPSTDAEMAAQGLA Rv3292|M.tuberculosis_H37Rv GVALTPRGRERYEAAMA--------AADPAAVWATHFPSTDAEMAAQGLA MAV_4264|M.avium_104 GVALTPRGRRRYDAAMA--------ADDPAAVWANYFPATDAQMAAEGLG MAB_3648|M.abscessus_ATCC_1997 GIALTPAGRGRYDDAVAAIDTAQADPEQAASMWASYFPDTEAGLDEQGLA *:*** ** :*: *:: :.:::* :** *:* : .**. Mflv_4798|M.gilvum_PYR-GCK YYV-----DGDPSR-PVVYEDFLPASAAGIFRSNLDTASAAVQGG----D Mvan_1644|M.vanbaalenii_PYR-1 YYH-----GGDPSR-PVVYEDFLPASAAGIFRSNLDTDAVAGAGG----D MUL_2646|M.ulcerans_Agy99 YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDGDTRTGQAAGAVDS MMAR_1241|M.marinum_M YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDGDTHTGQAAGAVDS Mb3320|M.bovis_AF2122/97 YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDRDSQTGDGP----D Rv3292|M.tuberculosis_H37Rv YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDRDSQTGDGP----D MAV_4264|M.avium_104 YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDAETPGAAQAAPAVD MAB_3648|M.abscessus_ATCC_1997 YFRTEMAPGGQIVRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGAD--ES *: .*: *:******* *********** . Mflv_4798|M.gilvum_PYR-GCK TTEYCQDWMAGRIGHHIHDPYDLYEKVAHS--------- Mvan_1644|M.vanbaalenii_PYR-1 TTDYSLDWMAGQIGHHIHDPYDLYEKVASS--------- MUL_2646|M.ulcerans_Agy99 DPAYHVGWLAGAIDRDIYDPYSLYDALATERAR------ MMAR_1241|M.marinum_M DPDYHVGWLAGAIDRDICDPYSLYDALATERAR------ Mb3320|M.bovis_AF2122/97 DAGYNVDWLAGAIGRHIHDPYALYDALAQEERR------ Rv3292|M.tuberculosis_H37Rv DAGYNVDWLAGAIGRHIHDPYALYDALAQEERR------ MAV_4264|M.avium_104 DSGYDQDWLAGALGREIHDPYPLYEALAQEAPR------ MAB_3648|M.abscessus_ATCC_1997 VTAYSKEWMSGAIGREIHDPYALYAAIAAQSDLTTGATR . * *::* :.:.* *** ** :* .