For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHPDAERLGSIQRVTAERHGAIRVG SPRELAAVADLFEAFGMYPVDFYDLRDAASPVPVVSTAFRPIDENELALNPFRVFTSMLATADRRFFDPD LRGRVENFVRQRELFDPALLAHARLISAAGGSTPAQADDFIAEAVNAFALSSAPIDRAWYDELSAVSPVA ADIAGVARTHINHLTPRVLDIDDLYRRMTARGVTMIEAIQGPPRWHGPEVLLRQTSFRALAEPRCFRMSD GSVGSDTLRVRFGEVEARGIALTPAGRGRYDDAVAAIDTAQADPEQAASMWASYFPDTEAGLDEQGLAYF RTEMAPGGQIVRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGADESVTAYSKEWMSGAIGREIHDPYALY AAIAAQSDLTTGATR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3648 | - | - | 100% (435) | hypothetical protein MAB_3648 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3320 | - | 1e-154 | 67.30% (422) | hypothetical protein Mb3320 |
| M. gilvum PYR-GCK | Mflv_4798 | - | 1e-142 | 63.68% (424) | hypothetical protein Mflv_4798 |
| M. tuberculosis H37Rv | Rv3292 | - | 1e-154 | 67.30% (422) | hypothetical protein Rv3292 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_1241 | - | 1e-153 | 68.17% (421) | hypothetical protein MMAR_1241 |
| M. avium 104 | MAV_4264 | - | 1e-147 | 64.42% (416) | hypothetical protein MAV_4264 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2646 | - | 1e-151 | 66.74% (427) | hypothetical protein MUL_2646 |
| M. vanbaalenii PYR-1 | Mvan_1644 | - | 1e-151 | 67.22% (421) | hypothetical protein Mvan_1644 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3320|M.bovis_AF2122/97 MSRSKRLQTGQLRARFAAGLSAMYAAEVPAYGTLVEVCAQVNSDYLTRHR
Rv3292|M.tuberculosis_H37Rv MSRSKRLQTGQLRARFAAGLSAMYAAEVPAYGTLVEVCAQVNSDYLTRHR
MMAR_1241|M.marinum_M MSSTNKLATWELRARFAAGLSAMYAGEVPAYSTLVDVTAEVNRDYVAAHP
MUL_2646|M.ulcerans_Agy99 MSSTNKLANWELRARFAAGLSAMYAGEVPAYSTLVDVTAEVNRGCVAAHS
MAV_4264|M.avium_104 --------------MFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHP
Mflv_4798|M.gilvum_PYR-GCK --MAEFVESCELRAQFAAGLSRMYGAEVPAYHTLVEVSSLVN---TASPG
Mvan_1644|M.vanbaalenii_PYR-1 --MCS-VETWQLRAQFAAGLSQMYGAEVPAYHTLVDVSSAVNAAYAAASP
MAB_3648|M.abscessus_ATCC_1997 --MTALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHP
**..** **. ***.* ***:* : ** :
Mb3320|M.bovis_AF2122/97 RAERLGSLQRVTAERHGAIRVGNPAELAAVADLFAAFGMLPVGYYDLRTA
Rv3292|M.tuberculosis_H37Rv RAERLGSLQRVTAERHGAIRVGNPAELAAVADLFAAFGMLPVGYYDLRTA
MMAR_1241|M.marinum_M GAERLGSLQRVTAERHGAIRVGSPAELAAVADLFAAFGMFAVGFYDLRSA
MUL_2646|M.ulcerans_Agy99 GAERLGSLQRVTAERHGAIRVGSPAELAAVADLFAAFGMFAVGFYDLRSA
MAV_4264|M.avium_104 DAERWGSLRRVTAERHGAIRVGSPAELRAVADLFAAFGMAPVGYYDLRRA
Mflv_4798|M.gilvum_PYR-GCK -ALRLGSLERVTAERHGAIRVGSAAELAQVADLFSAFGMYPVGYYDLREA
Mvan_1644|M.vanbaalenii_PYR-1 -ALRLGSLERVTAERHGAIRVGSAAELAQVADLFSAFGMHPVGFYDLREA
MAB_3648|M.abscessus_ATCC_1997 DAERLGSIQRVTAERHGAIRVGSPRELAAVADLFEAFGMYPVDFYDLRDA
* * **:.*************.. ** ***** **** .*.:**** *
Mb3320|M.bovis_AF2122/97 ESPIPVVSTAFRPIDANELAHNPFRVFTSMLAIEDRRYFDADLRTRVQTF
Rv3292|M.tuberculosis_H37Rv ESPIPVVSTAFRPIDANELAHNPFRVFTSMLAIEDRRYFDADLRTRVQTF
MMAR_1241|M.marinum_M RSPIPVVSTAFRPIDAEELANNPFRVFTSMLATGDSRFFDSGLRARVLTF
MUL_2646|M.ulcerans_Agy99 RSPIPVVSTAFRPIDAEELANNPFRVFNSMLATGDSRFFDSGLRARVLTF
MAV_4264|M.avium_104 ASPIPVVCTAFRPVDGNELSLNPFRMFTSMLATRDRRYFDRDLRARVDNF
Mflv_4798|M.gilvum_PYR-GCK ASPIPVVSTAFRPIGQDELARNPFRVFTSMLTVADGRFFSADLRTRVQRF
Mvan_1644|M.vanbaalenii_PYR-1 ASPVPVVSTAFRPVDPDELARNPFRVFTSMLASADIRFFTADLRGRVERF
MAB_3648|M.abscessus_ATCC_1997 ASPVPVVSTAFRPIDENELALNPFRVFTSMLATADRRFFDPDLRGRVENF
**:***.*****:. :**: ****:*.***: * *:* .** ** *
Mb3320|M.bovis_AF2122/97 LARRQLFDPALLAQARAIAADGGCDADDAPAFVAAAVAAFALSREPVEKS
Rv3292|M.tuberculosis_H37Rv LARRQLFDPALLAQARAIAADGGCDADDAPAFVAAAVAAFALSREPVEKS
MMAR_1241|M.marinum_M LGRRQLFDPALLAQARVIAAEGGCDAAQAPDFVAKAVAAFALSREPIDKA
MUL_2646|M.ulcerans_Agy99 LGRRQLFDPALLAQARVIAAEGGCDAAQAPDFVAKAVAAFALSREPIDKA
MAV_4264|M.avium_104 LAHRQLFDPALLARARSIAAAGGCADDAARPFVAAAVASFALSGKPIERS
Mflv_4798|M.gilvum_PYR-GCK LDSRQLFDPALIASAQRIAAAGGCPAGDAPGFVTAAVSAFALSREPIDRA
Mvan_1644|M.vanbaalenii_PYR-1 VAGRQLFDPGLIASAHLIAAAGGCPADEAADFVAAAVSAFALSREPIDRA
MAB_3648|M.abscessus_ATCC_1997 VRQRELFDPALLAHARLISAAGGSTPAQADDFIAEAVNAFALSSAPIDRA
: *:****.*:* *: *:* **. * *:: ** :**** *::::
Mb3320|M.bovis_AF2122/97 WYDELSRVSAVAADIAGVGSTHINHLTPRVLDIDDLYRRMTERGITMIDT
Rv3292|M.tuberculosis_H37Rv WYDELSRVSAVAADIAGVGSTHINHLTPRVLDIDDLYRRMTERGITMIDT
MMAR_1241|M.marinum_M WYDELSRVSAVAADIAGVGSTHINHLTPRVLDIDDLYARMTGRGITMIEA
MUL_2646|M.ulcerans_Agy99 WYDELSRVSAVAADIAEVGSTHINHLTPRVLDIDDLYARMTGRGITMIEA
MAV_4264|M.avium_104 WYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRMTGRGIAMIDA
Mflv_4798|M.gilvum_PYR-GCK WYDELSAVSAVAADIAGVTSTHINHLTPRVLDIDALQQAMTERGITMIDR
Mvan_1644|M.vanbaalenii_PYR-1 WYDELAAVSAVAADIAGVTSTHINHLTPRVLDIDELQRAMTERGITMIDH
MAB_3648|M.abscessus_ATCC_1997 WYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTARGVTMIEA
*****: **.****** * **:*********** * ** **::**:
Mb3320|M.bovis_AF2122/97 IQGPPRTDGPDVLLRQTSFRALAEPRMFRDEDGTVTPGILRVRFGEVEAR
Rv3292|M.tuberculosis_H37Rv IQGPPRTDGPDVLLRQTSFRALAEPRMFRDEDGTVTPGILRVRFGEVEAR
MMAR_1241|M.marinum_M IQGPPRTVGPAVLLRQTSFRALAEPRRFRGADGTVTEGSLRVRFGEVEAR
MUL_2646|M.ulcerans_Agy99 IQGPPRTVGPAVLLRQTSFRALAEPRLFRGADGTVTEGSLRVRFGEVEAR
MAV_4264|M.avium_104 IQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEAR
Mflv_4798|M.gilvum_PYR-GCK IQGPPRVDGPQVLLRQTSFRALAEPRRFRSPSGEVTDGTLRVRFGEVEQR
Mvan_1644|M.vanbaalenii_PYR-1 IQGPPRVSGPQVLLRQTSFRALAEPRRFRTPSGEVVDGTLRVRFGEVEQR
MAB_3648|M.abscessus_ATCC_1997 IQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEAR
***** ** *************** ** .* : . :******** *
Mb3320|M.bovis_AF2122/97 GVALTPRGRERYEAAMA--------AADPAAVWATHFPSTDAEMAAQGLA
Rv3292|M.tuberculosis_H37Rv GVALTPRGRERYEAAMA--------AADPAAVWATHFPSTDAEMAAQGLA
MMAR_1241|M.marinum_M GVALTRRGRERYDAAMARLA----GAGDPATIWSDHFPATDAEMAAQGLA
MUL_2646|M.ulcerans_Agy99 GVALTRRGRERYDAAMARLA----GAGDPATIWSNHFPATDAEMAAQGLA
MAV_4264|M.avium_104 GVALTPRGRRRYDAAMA--------ADDPAAVWANYFPATDAQMAAEGLG
Mflv_4798|M.gilvum_PYR-GCK GVALTRAGRERYDAAMS--------APDPAAVWHRHFPATDAEMAASGLA
Mvan_1644|M.vanbaalenii_PYR-1 GIALTPLGRSHYDAAMA--------CADPSAVWGEHFPATDAEMAASGLA
MAB_3648|M.abscessus_ATCC_1997 GIALTPAGRGRYDDAVAAIDTAQADPEQAASMWASYFPDTEAGLDEQGLA
*:*** ** :*: *:: :.:::* :** *:* : .**.
Mb3320|M.bovis_AF2122/97 YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDRDSQTGDGP----D
Rv3292|M.tuberculosis_H37Rv YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDRDSQTGDGP----D
MMAR_1241|M.marinum_M YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDGDTHTGQAAGAVDS
MUL_2646|M.ulcerans_Agy99 YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDGDTRTGQAAGAVDS
MAV_4264|M.avium_104 YYR-----GGDPSA-PIVYEDFLPASAAGIFRSNLDAETPGAAQAAPAVD
Mflv_4798|M.gilvum_PYR-GCK YYV-----DGDPSR-PVVYEDFLPASAAGIFRSNLDTASAAVQGG----D
Mvan_1644|M.vanbaalenii_PYR-1 YYH-----GGDPSR-PVVYEDFLPASAAGIFRSNLDTDAVAGAGG----D
MAB_3648|M.abscessus_ATCC_1997 YFRTEMAPGGQIVRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGAD--ES
*: .*: *:******* *********** .
Mb3320|M.bovis_AF2122/97 DAGYNVDWLAGAIGRHIHDPYALYDALAQEERR------
Rv3292|M.tuberculosis_H37Rv DAGYNVDWLAGAIGRHIHDPYALYDALAQEERR------
MMAR_1241|M.marinum_M DPDYHVGWLAGAIDRDICDPYSLYDALATERAR------
MUL_2646|M.ulcerans_Agy99 DPAYHVGWLAGAIDRDIYDPYSLYDALATERAR------
MAV_4264|M.avium_104 DSGYDQDWLAGALGREIHDPYPLYEALAQEAPR------
Mflv_4798|M.gilvum_PYR-GCK TTEYCQDWMAGRIGHHIHDPYDLYEKVAHS---------
Mvan_1644|M.vanbaalenii_PYR-1 TTDYSLDWMAGQIGHHIHDPYDLYEKVASS---------
MAB_3648|M.abscessus_ATCC_1997 VTAYSKEWMSGAIGREIHDPYALYAAIAAQSDLTTGATR
. * *::* :.:.* *** ** :* .