For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KITFVPTRLRRSGQSNGNRKRGTPRQLFGGRIRLSTVVLMVAFLAVWWLYDTYNPQHSAGKTTPPSQVVP PGLVPDPNYTWVPRTRVQPPTTATRPTPTTTSPTPTPTPTTSTPVPGPSAPPCLLPPPFCPATTTPPTPV PSPSQTPEPEPGPVSSGPTPTPPAS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2410 | - | - | 100% (166) | hypothetical protein MUL_2410 |
M. ulcerans Agy99 | MUL_1004 | - | 2e-12 | 30.09% (113) | hypothetical protein MUL_1004 |
M. ulcerans Agy99 | MUL_1226 | - | 3e-11 | 38.18% (110) | hypothetical protein MUL_1226 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3130c | - | 4e-41 | 57.14% (147) | hypothetical protein Mb3130c |
M. gilvum PYR-GCK | Mflv_4449 | - | 2e-29 | 43.20% (169) | hypothetical protein Mflv_4449 |
M. tuberculosis H37Rv | Rv3103c | - | 4e-41 | 57.14% (147) | hypothetical protein Rv3103c |
M. leprae Br4923 | MLBr_02395 | Ag36 | 4e-07 | 37.66% (77) | proline rich antigenic protein |
M. abscessus ATCC 19977 | MAB_3476c | - | 1e-16 | 37.16% (148) | hypothetical protein MAB_3476c |
M. marinum M | MMAR_1529 | - | 1e-100 | 99.40% (166) | hypothetical protein MMAR_1529 |
M. avium 104 | MAV_4004 | - | 4e-42 | 52.69% (167) | hypothetical protein MAV_4004 |
M. smegmatis MC2 155 | MSMEG_2088 | - | 1e-27 | 41.89% (148) | hypothetical protein MSMEG_2088 |
M. thermoresistible (build 8) | TH_2661 | - | 1e-26 | 43.98% (166) | PUTATIVE - |
M. vanbaalenii PYR-1 | Mvan_1913 | - | 4e-32 | 48.50% (167) | hypothetical protein Mvan_1913 |
CLUSTAL 2.0.9 multiple sequence alignment MUL_2410|M.ulcerans_Agy99 -MKITFVPTRLRRSGQSNGNRKRGTPRQLFGGRIRLSTVVLMVAFLAVWW MMAR_1529|M.marinum_M -MKITFVPTRLRRSGQSNGNRKRGTPRQLFGGRIRLSTVVLMVAFLAVWW Mb3130c|M.bovis_AF2122/97 -MKLS--------------NQKRHWPGYLFG-RIRTSTLVLIAAFLAVWW Rv3103c|M.tuberculosis_H37Rv -MKLS--------------NQKRHWPGYLFG-RIRTSTLVLIAAFLAVWW MAV_4004|M.avium_104 -MKFTLN-ILEKRGNDDDTEAEHRWPQYVFGGRMRTSTFVLIVAFLLVWW Mflv_4449|M.gilvum_PYR-GCK --------MTLPSFLQRLQPKNRHSRAYLFGGRMRVSTVGLVLVFFALYW Mvan_1913|M.vanbaalenii_PYR-1 -----------MRFIRRRDGESRGWPTYLLGGRIRASTAGLILAFLALFW TH_2661|M.thermoresistible__bu -----------------MPDRRLRIPGRLFGGRIRTSTVALIAAFIGLVW MSMEG_2088|M.smegmatis_MC2_155 --------------------------------------MVLIVAFFALWW MAB_3476c|M.abscessus_ATCC_199 --------MSEPRHEPFWEMALSRAKKLRKKIRFRTSTVVLVLAFIATSW MLBr_02395|M.leprae_Br4923 MTDQPPPSGSNPTPAPPPPGSSGGYEPSFAPSELGSAYPPPTAPPVGGSY . : MUL_2410|M.ulcerans_Agy99 LYDTYNPQHSAGKTTPPSQVVPP-----GLVPDPN------------YTW MMAR_1529|M.marinum_M LYDTYNPQHSAGKTTPPSQVVPP-----GFVPDPN------------YTW Mb3130c|M.bovis_AF2122/97 IYETYRPQAPGPGDSPPTQVVPP-----GFVPDPD------------YTW Rv3103c|M.tuberculosis_H37Rv IYETYRPQAPGPGDSPPTQVVPP-----GFVPDPD------------YTW MAV_4004|M.avium_104 VYDTYRPE-PAPK-PPAQQVVPP-----GFVPDPN------------YTW Mflv_4449|M.gilvum_PYR-GCK VNQNYQPEPPAPAMDPAQQVVPP-----GFVPDPN------------YTW Mvan_1913|M.vanbaalenii_PYR-1 VNQNYQPELPAPTPDPAQQVVPP-----GFVPDPN------------YTW TH_2661|M.thermoresistible__bu LDQVYEP---PPPPEPVQQWVPP-----GFVPNPD------------YTW MSMEG_2088|M.smegmatis_MC2_155 LQQTYQP---EPARTETPQVVPP-----GFVPDPD------------YTW MAB_3476c|M.abscessus_ATCC_199 LYDITRPEPAPPQPPPGYTWVPK-----PSVTTTT------------QQP MLBr_02395|M.leprae_Br4923 PPPPPPGGSYPPPPPPGGSYPPPPPSTGAYAPPPPGPAIRSLPKEAYTFW * .. . MUL_2410|M.ulcerans_Agy99 VPRTRVQPP--TTATRPTPTTTSPT--------PTPTPTTSTPVPGPSAP MMAR_1529|M.marinum_M VPRTRVQPP--TTATRPTPTTTSPT--------PTPTPTTSTPVPGPSAP Mb3130c|M.bovis_AF2122/97 VPRTRVQPP--TVKATPTTTSSTP---------PVSPPETTTDSAVP--P Rv3103c|M.tuberculosis_H37Rv VPRTRVQPP--TVKATPTTTSSTP---------PVSPPETTTDSAVP--P MAV_4004|M.avium_104 VPRSRLQQPPATVTYTPTPTSTPPP--------PPPPPPVTTTTTTTTTP Mflv_4449|M.gilvum_PYR-GCK VPRTNVETRAPEPTTTTTTTTTTPT------TTTTTTPSPTPDTPTTSPE Mvan_1913|M.vanbaalenii_PYR-1 VPRTNVAPRQPEVTTTTPTTTTT---------TTTTPPETTTATTTAEPT TH_2661|M.thermoresistible__bu VPRT--AVRRPPTTESEPTTTTT---------TTTTPP---ADTPTTTPP MSMEG_2088|M.smegmatis_MC2_155 VPRTKVETPRTTRTTTPTTTTTTPPPTSETPTTTPTGPLGPGDTTSPTSP MAB_3476c|M.abscessus_ATCC_199 VPTTTRRRTTTTPPTTTTTTTEQTN------TIVTTFPTLTPSGTAPTPP MLBr_02395|M.leprae_Br4923 VTRVLAYVIDNIPATVLLGIGMLIQTLTKQEACVTDITQYNVNQYCATQP *. . . MUL_2410|M.ulcerans_Agy99 PCLLP--------------------------PPFCPATTTPPTPVPSPS- MMAR_1529|M.marinum_M PCLLP--------------------------PPFCPATTTPPTPVPSPS- Mb3130c|M.bovis_AF2122/97 PFELP--------------------------PPFGPGTTTPTPPAP---- Rv3103c|M.tuberculosis_H37Rv PFELP--------------------------PPFGPGTTTPTPPAP---- MAV_4004|M.avium_104 PFQLPK---------LPCILP----------APFCPPSTTPSTPAP---- Mflv_4449|M.gilvum_PYR-GCK TSTPP-PAGPLFPSEPTTTVI----------DPDGPGPLAPQTFTQ---- Mvan_1913|M.vanbaalenii_PYR-1 PSTTPGPLGPVVPFGPTTTVI----------DPDGPGPLSPQTFTQ---- TH_2661|M.thermoresistible__bu AVTTP--------EEPTTTVI----------DPDGPGLLPPTTVTETDRP MSMEG_2088|M.smegmatis_MC2_155 TSTSP---------GPATTVV----------DPDGPGILPPITLPVLPG- MAB_3476c|M.abscessus_ATCC_199 TTTTP----------------------------APPGIVPPWLVPP---- MLBr_02395|M.leprae_Br4923 TGIGMLAFWFAWLMATAYLVWNYGYRQGATGSSIGKTVMKFKVISEATGQ . MUL_2410|M.ulcerans_Agy99 -------QTPEPE--PGPVS-----SGPTPTPPAS-------------- MMAR_1529|M.marinum_M -------QTPEPE--PGPVS-----SGPTPTPPAS-------------- Mb3130c|M.bovis_AF2122/97 --------LPQPG--PGPTAG----TYPKSEPPTR-------------- Rv3103c|M.tuberculosis_H37Rv --------LPQPG--PGPTAG----TYPKSEPPTR-------------- MAV_4004|M.avium_104 -------EQPQPG--PGPTP--------TSPPPAS-------------- Mflv_4449|M.gilvum_PYR-GCK -------APPVLT--PTTVAP----PGPVLPPTPP---QP--------- Mvan_1913|M.vanbaalenii_PYR-1 -------APPVP---PTTVTA----PAPTPTAPPP---LP--------- TH_2661|M.thermoresistible__bu DL----GAPPTPWGPPTTTTAPAFGPGQQPQNQPPGAARPPGG------ MSMEG_2088|M.smegmatis_MC2_155 -------AAPAPA--PTPTPE----PATEPAAPAP----PQ-------- MAB_3476c|M.abscessus_ATCC_199 -------QLPQLPPMPGAPPP----PGQNPAP----------------- MLBr_02395|M.leprae_Br4923 PIGFGMSVVRQLAHFVDAVICCIGFLFPLWDSKRQTLADKIMTTVCLPI .