For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGWIARIMRLGLVAEKLGDESTPAVAAPAGLRGSLQVRHVDAGSCNGCEVEISGAFGPVYDAERVGARLV ASPRHADALLVTGVVTRNMAQPLKNTLAATPQPRVVIACGDCALNRGVFADAYGVVGAVSEVVPVDVEVP GCPPTPDQVVAALRSVTGR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1891 | - | - | 100% (159) | oxidoreductase |
M. ulcerans Agy99 | MUL_2460 | nuoB | 1e-17 | 39.25% (107) | NADH dehydrogenase subunit B |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0085 | - | 1e-69 | 77.99% (159) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_4482 | - | 1e-17 | 40.19% (107) | NADH dehydrogenase subunit B |
M. tuberculosis H37Rv | Rv0082 | - | 3e-69 | 77.36% (159) | oxidoreductase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2135 | - | 1e-17 | 39.25% (107) | NADH dehydrogenase subunit B |
M. marinum M | MMAR_1654 | - | 3e-87 | 98.74% (159) | oxidoreductase |
M. avium 104 | MAV_5114 | - | 2e-66 | 89.39% (132) | hydrogenase-4, I subunit, putative |
M. smegmatis MC2 155 | MSMEG_2062 | nuoB | 2e-17 | 40.19% (107) | NADH dehydrogenase subunit B |
M. thermoresistible (build 8) | TH_0636 | nuoB | 6e-17 | 38.32% (107) | PROBABLE NADH DEHYDROGENASE I (CHAIN B) NUOB |
M. vanbaalenii PYR-1 | Mvan_1884 | - | 1e-17 | 40.19% (107) | NADH dehydrogenase subunit B |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4482|M.gilvum_PYR-GCK ---------MGLEEKLPGGILLSTVEKVAGYVRKGSLWPATFG-LACCAI Mvan_1884|M.vanbaalenii_PYR-1 ---------MGLEERLPGGILLSTVEKVAGYVRKGSLWPATFG-LACCAI MSMEG_2062|M.smegmatis_MC2_155 ---------MGLEERLPGGILLSTVETVAGYVRKGSLWPATFG-LACCAI TH_0636|M.thermoresistible__bu ---------VGLEEQLPGGILLSTVEKVAGYVRKGSLWPATFG-LACCAI MAB_2135|M.abscessus_ATCC_1997 ---------MGLEEKLPSGFLLSTVETLAGYVRKGSLWPATFG-LACCAI MUL_1891|M.ulcerans_Agy99 MGWIARIMRLGLVAEKLGDESTPAVAAPAGLRGSLQVRHVDAGSCNGCEV MMAR_1654|M.marinum_M MGWIARIMRLGRVAEKLGDESTPAVAAPAGLRGSLQVRHVDAGSCNGCEV Mb0085|M.bovis_AF2122/97 MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSCNGCEV Rv0082|M.tuberculosis_H37Rv MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSCNGCEV MAV_5114|M.avium_104 ------------------------MEPPAGVEGSLQVRHVDAGSCNGCEV ** . .: . * * : Mflv_4482|M.gilvum_PYR-GCK EMMATAGPRFDISRFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQ Mvan_1884|M.vanbaalenii_PYR-1 EMMATAGPRFDISRFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQ MSMEG_2062|M.smegmatis_MC2_155 EMMSTAGPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQ TH_0636|M.thermoresistible__bu EMMATASPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQ MAB_2135|M.abscessus_ATCC_1997 EMMSTAGPRFDIARFGMERFSATPRQADLMIVAGRVSQKMAPVLRQIYDQ MUL_1891|M.ulcerans_Agy99 EISGAFGPVYDAERVG-ARLVASPRHADALLVTGVVTRNMAQPLKNTLAA MMAR_1654|M.marinum_M EISGAFGPVYDAERFG-ARLVASPRHADALLVTGVVTRNMAQPLKNTLAA Mb0085|M.bovis_AF2122/97 EISGAFGPVYDAERFG-ARLVASPRHADALLVTGVVTHNMAGPLRKTLEA Rv0082|M.tuberculosis_H37Rv EISGAFGPVYDAERFG-ARLVASPQHADALLVTGVVTHNMAGPLRKTLEA MAV_5114|M.avium_104 EISGAFGPVYDAERFG-ARLVASPRHADALLVTGVVTRNMVEPLRNTLAA *: .: .* :* *.* *: *:*::** ::*:* *:::*. *:: Mflv_4482|M.gilvum_PYR-GCK MAEPKWVLAMGVCASSGGMFNN-YAVVQGVDHVVPVDIYLPGCPPRPEML Mvan_1884|M.vanbaalenii_PYR-1 MAEPKWVLAMGVCASSGGMFNN-YAVVQGVDHVVPVDIYLPGCPPRPEML MSMEG_2062|M.smegmatis_MC2_155 MVEPKWVLAMGVCASSGGMFNN-YAVVQGVDHVVPVDIYLPGCPPRPEML TH_0636|M.thermoresistible__bu MAEPKWVLAMGVCASSGGMFNN-YAIVQGVDHVVPVDIYLPGCPPRPEML MAB_2135|M.abscessus_ATCC_1997 MAEPKWVLAMGVCASSGGMFNN-YAIVQGVDHVVPVDIYLPGCPPRPEML MUL_1891|M.ulcerans_Agy99 TPQPRVVIACGDCALNRGVFADAYGVVGAVSEVVPVDVEVPGCPPTPDQV MMAR_1654|M.marinum_M TPQPRVVIACGDCALNRGVFADAYGVVGAVSEVVPVDVEVPGCPPTPDQV Mb0085|M.bovis_AF2122/97 TPRPRVVIACGDCALNRGVFADAYGVVGAVGEVVPVDVEIAGCPPTPAAI Rv0082|M.tuberculosis_H37Rv TPRPRVVIACGDCALNRGVFADAYGVVGAVGEVVPVDVEIAGCPPTPAAI MAV_5114|M.avium_104 TPQPRVVIACGDCALNRGVFTDAYGVVGAVGEIVPVDVEVAGCPPTPAQI .*: *:* * ** . *:* : *.:* .*..:****: :.**** * : Mflv_4482|M.gilvum_PYR-GCK LHAILKLHDKIQQMPLGVNREEAIREAEQAAMALTPTIELKGLLR Mvan_1884|M.vanbaalenii_PYR-1 LHAILKLHDKIQQMPLGVNREEAIREAERAALAVTPTIELKGLLR MSMEG_2062|M.smegmatis_MC2_155 LHAILKLHDKIQQMPLGVNREEAIREAEQAALAVPPTIELKGLLR TH_0636|M.thermoresistible__bu LHAILKLHDKIQQMPLGVHRDEVIRETERAALAAPTTVEFKGRMR MAB_2135|M.abscessus_ATCC_1997 LHAILKLHEKIAHMPLGANREEVIRETEAAALAATPTIEMKGLLR MUL_1891|M.ulcerans_Agy99 VAALRSVTGR----------------------------------- MMAR_1654|M.marinum_M VAALRSVTGR----------------------------------- Mb0085|M.bovis_AF2122/97 MAALRSVTGK----------------------------------- Rv0082|M.tuberculosis_H37Rv MAALRSVTGK----------------------------------- MAV_5114|M.avium_104 VDALRSVTGK----------------------------------- : *: .: :