For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VASGRGRRVIAAKAVVAIFVGVASACGLAGCFGSGGRSAAPRLPNGGNEESRLPPIYPGTTVSIPPTTTS AGPASGIPGDGTFRVGVDIKAGTYRSAGGDSCYWERLRGVGGTLDEVIANGAGTGPQVVQIRPSDAAFKT QHCPPWTLDSSAITTTTTTTTTTSTTPVTLPKGAQACPNVSGPAGGFAQSAAGTPATSCPFAEQVRLAYG AGAPAGAAPRQVEVVSPVTGQSYSMTCTANGPLVTCSGGDGAIVYLY
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_1252 | - | - | 100% (257) | hypothetical protein MUL_1252 |
| M. ulcerans Agy99 | MUL_2927 | - | 1e-13 | 54.29% (70) | hypothetical protein MUL_2927 |
| M. ulcerans Agy99 | MUL_3893 | - | 6e-10 | 32.67% (101) | hypothetical protein MUL_3893 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1941c | - | 1e-14 | 50.65% (77) | hypothetical protein Mb1941c |
| M. gilvum PYR-GCK | Mflv_1068 | - | 1e-11 | 35.96% (89) | hypothetical protein Mflv_1068 |
| M. tuberculosis H37Rv | Rv1906c | - | 1e-14 | 50.65% (77) | hypothetical protein Rv1906c |
| M. leprae Br4923 | MLBr_02010 | - | 8e-14 | 39.62% (106) | putative lipoprotein |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3613 | - | 1e-146 | 97.28% (257) | hypothetical protein MMAR_3613 |
| M. avium 104 | MAV_2795 | - | 3e-16 | 31.07% (206) | hypothetical protein MAV_2795 |
| M. smegmatis MC2 155 | MSMEG_3491 | - | 8e-16 | 35.46% (141) | hypothetical protein MSMEG_3491 |
| M. thermoresistible (build 8) | TH_0862 | - | 1e-15 | 42.42% (99) | CONSERVED HYPOTHETICAL PROTEIN |
| M. vanbaalenii PYR-1 | Mvan_5756 | - | 5e-12 | 34.23% (111) | hypothetical protein Mvan_5756 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_3491|M.smegmatis_MC2_155 ---------------MANAEPTTPVPAPAPAPSPAVGTGTGPAPG-----
TH_0862|M.thermoresistible__bu -------MRSRTAALSAVAALVAGVWLTSPWPAGAEPTIEPAEPSGE---
Mb1941c|M.bovis_AF2122/97 -----------------MRLKPAPSPAAAFAVAGLILAGWAGSVGLA---
Rv1906c|M.tuberculosis_H37Rv -----------------MRLKPAPSPAAAFAVAGLILAGWAGSVGLA---
MLBr_02010|M.leprae_Br4923 -----------------MWLTAAP-AAARFVVASVIAASCAASTGVA---
MAV_2795|M.avium_104 MAAGWAASTVVAGADPDETHGPAPGPAATPSPAPSASPSPAASPSPS---
Mflv_1068|M.gilvum_PYR-GCK ------------MRLTRPAALGAAAAASCLLLAPVASAQPEPTP------
Mvan_5756|M.vanbaalenii_PYR-1 ------------MRLRKPAVLVTAALAGWCVLAPVAGAQPAPEPPPA---
MUL_1252|M.ulcerans_Agy99 ---MASGRGRRVIAAKAVVAIFVGVASACGLAGCFGSGGRSAAPRLPNGG
MMAR_3613|M.marinum_M MTGVASGRGRREIAAKAVVAIVVGVASACGLTGCFGSGGRSAAPRLPTGG
. .
MSMEG_3491|M.smegmatis_MC2_155 ---------------PAPEAAAAEGPAPVMDHDGIYVVGTDIQPGTYATG
TH_0862|M.thermoresistible__bu ---------------PAPQAAPAQ-PRTTIDADGTYAVGTDVVPGTYSSA
Mb1941c|M.bovis_AF2122/97 ---------------GADPEPAPT-PKTAIDSDGTYAVGIDIAPGTYSSA
Rv1906c|M.tuberculosis_H37Rv ---------------GADPEPAPT-PKTAIDSDGTYAVGIDIAPGTYSSA
MLBr_02010|M.leprae_Br4923 ---------------GADPQSPSA-PKTTIDHDGTYAVGTDIAPGTYSSA
MAV_2795|M.avium_104 ---------------ASPAPAPAA-PKTTIDKDGIYAVGTDIAPGVYSSG
Mflv_1068|M.gilvum_PYR-GCK -------------------APDAEGPKTTIDASGSYAVGTEILPGVYQSA
Mvan_5756|M.vanbaalenii_PYR-1 ---------------PPADAPPAEGPKTTIDANGSYAVGTEIAPGVYQSA
MUL_1252|M.ulcerans_Agy99 NEESRLPPIYPGTTVSIPPTTTSAGPASGIPGDGTFRVGVDIKAGTYRSA
MMAR_3613|M.marinum_M NEESRLPPIYPGTTVSIPPTTTSAGPASGIPGDGTFRVGVDIKAGTYRSA
. . * . : .* : ** :: .*.* :.
MSMEG_3491|M.smegmatis_MC2_155 GPADGQTCYWKRMADLH----GGDIIDNAFTKKPDVVQIEATDKAFKTSG
TH_0862|M.thermoresistible__bu GPVEGDVCYWKRVSSADGQADGGKILDNAMSKKPQVVQIEATDGAFVTRG
Mb1941c|M.bovis_AF2122/97 GPVGDGTCYWKRMGNPD-----GALIDNALSKKPQVVTIEPTDKAFKTHG
Rv1906c|M.tuberculosis_H37Rv GPVGDGTCYWKRMGNPD-----GALIDNALSKKPQVVTIEPTDKAFKTHG
MLBr_02010|M.leprae_Br4923 GPVGNGTCYWKRIDNPD-----GP-IDNAMSKKPKIVQIEASNKAFKTTG
MAV_2795|M.avium_104 GPVGNGTCYWKRMGNPD-----GAVIDNAMTKKPQVVQIDPGDKSFKTSG
Mflv_1068|M.gilvum_PYR-GCK GPVDDGACYWKRVAGEE-------LVDNALTKKPAFVQIMPTDTTFTTSD
Mvan_5756|M.vanbaalenii_PYR-1 GPIDGGACYWKRTAGEE-------TVDNRLTKKPSFVQIMPTDTTFTTSD
MUL_1252|M.ulcerans_Agy99 G---GDSCYWERLRGVGG--TLDEVIANGAGTGPQVVQIRPSDAAFKTQH
MMAR_3613|M.marinum_M G---GDSCYWERLRGVGG--TLDEVIANGAGTGPQVVQIRPSDAAFKTQH
* . ***:* . : * . * .* * . : :* *
MSMEG_3491|M.smegmatis_MC2_155 CQPWTQTTAAPTDTPTGEGAPGDLPGLLAK-AKLRTWLDTINNGARQYDG
TH_0862|M.thermoresistible__bu CQPWRQTTAPSGE----IDLPPEVDALIGK-AKLRHYIDTLNRNAQAFG-
Mb1941c|M.bovis_AF2122/97 CQPWQNTGSEGAA-------PAGVPGPEAG-AQLQNQLGILN-GLLGPTG
Rv1906c|M.tuberculosis_H37Rv CQPWQNTGSEGAA-------PAGVPGPEAG-AQLQNQLGILN-GLLGPTG
MLBr_02010|M.leprae_Br4923 CQPWQQT-SNTTV-------STDLPGPIAG-IQLESNLGILN-GLLASNG
MAV_2795|M.avium_104 CQPWQLT-------------PDAVPPPSAPPAGVQGTLGILN-GLLGGAG
Mflv_1068|M.gilvum_PYR-GCK CQAWTLT-------------NAPMPPQPSPASLLGELTKAIGSGMFSGG-
Mvan_5756|M.vanbaalenii_PYR-1 CQTWQLT-------------NAPMPPEPGPGSLLGELTQAIGSGMFSGG-
MUL_1252|M.ulcerans_Agy99 CPPWTLDSSAITTTTTTTTTTSTTPVTLPKGAQACPNVSGPAGGFAQSAA
MMAR_3613|M.marinum_M CPPWTLDSSATTTTTTTTTTTSTTPVTLPEGAQACPNVSGPAGGFAQSAA
* .* .
MSMEG_3491|M.smegmatis_MC2_155 SQVPLP--------------------------------------------
TH_0862|M.thermoresistible__bu -QVPPP--------------------------------------------
Mb1941c|M.bovis_AF2122/97 GRVPQP--------------------------------------------
Rv1906c|M.tuberculosis_H37Rv GRVPQP--------------------------------------------
MLBr_02010|M.leprae_Br4923 QQVPRS--------------------------------------------
MAV_2795|M.avium_104 QQAPSAPSAPAAPPSGAQSPAAAPAPQAAHP-------------------
Mflv_1068|M.gilvum_PYR-GCK ---PPP--------------------------------------------
Mvan_5756|M.vanbaalenii_PYR-1 ---PR---------------------------------------------
MUL_1252|M.ulcerans_Agy99 GTPATSCPFAEQVRLAYGAGAPAGAAPRQVEVVSPVTGQSYSMTCTANGP
MMAR_3613|M.marinum_M GTPATSCPFAEQVRLAYGAGAPAGAAPRQVEVVSPVTGQSYSMTCTANGP
.
MSMEG_3491|M.smegmatis_MC2_155 ---------------
TH_0862|M.thermoresistible__bu ---------------
Mb1941c|M.bovis_AF2122/97 ---------------
Rv1906c|M.tuberculosis_H37Rv ---------------
MLBr_02010|M.leprae_Br4923 ---------------
MAV_2795|M.avium_104 ---------------
Mflv_1068|M.gilvum_PYR-GCK ---------------
Mvan_5756|M.vanbaalenii_PYR-1 ---------------
MUL_1252|M.ulcerans_Agy99 LVTCSGGDGAIVYLY
MMAR_3613|M.marinum_M LVTCSGGDGAVVYLY