For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISNEKLR NKRAYSHSGYPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKNKLSRQIQSKLRVYAGPGHPHTAQQPVPF EIKQVAQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0864 | rplM | - | 100% (147) | 50S ribosomal protein L13 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3473c | rplM | 9e-74 | 87.76% (147) | 50S ribosomal protein L13 |
| M. gilvum PYR-GCK | Mflv_4950 | rplM | 7e-68 | 81.63% (147) | 50S ribosomal protein L13 |
| M. tuberculosis H37Rv | Rv3443c | rplM | 9e-74 | 87.76% (147) | 50S ribosomal protein L13 |
| M. leprae Br4923 | MLBr_00364 | rplM | 1e-73 | 88.44% (147) | 50S ribosomal protein L13 |
| M. abscessus ATCC 19977 | MAB_3752c | rplM | 1e-66 | 80.27% (147) | 50S ribosomal protein L13 |
| M. marinum M | MMAR_1106 | rplM | 1e-80 | 98.64% (147) | 50S ribosomal protein L13, RplM |
| M. avium 104 | MAV_4386 | rplM | 3e-73 | 88.44% (147) | 50S ribosomal protein L13 |
| M. smegmatis MC2 155 | MSMEG_1556 | rplM | 1e-69 | 82.99% (147) | 50S ribosomal protein L13 |
| M. thermoresistible (build 8) | TH_1197 | rplM | 1e-63 | 74.83% (147) | PROBABLE 50S RIBOSOMAL PROTEIN L13 RPLM |
| M. vanbaalenii PYR-1 | Mvan_1469 | rplM | 1e-69 | 83.67% (147) | 50S ribosomal protein L13 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4950|M.gilvum_PYR-GCK MSTYTPKAGDTTRSWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDG
Mvan_1469|M.vanbaalenii_PYR-1 MSTYTPKAGDTTRTWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDG
MSMEG_1556|M.smegmatis_MC2_155 MPTYTPKAGDTTRSWYVIDASDVVLGRLASAAATLLRGKHKPTFTPNVDG
MAB_3752c|M.abscessus_ATCC_199 MPTYTPKAGDVTRTWYVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDG
MUL_0864|M.ulcerans_Agy99 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
MMAR_1106|M.marinum_M MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
Mb3473c|M.bovis_AF2122/97 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
Rv3443c|M.tuberculosis_H37Rv MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
MLBr_00364|M.leprae_Br4923 MPTYAPKAGDTTCSWYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDG
MAV_4386|M.avium_104 MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
TH_1197|M.thermoresistible__bu VPTYTPKAGDTTRSWYVIDATDVRLGRLAAAAATLLRGKHKPTYTPNVDG
:.**:*****.* :******:** ***** **.*********::*:***
Mflv_4950|M.gilvum_PYR-GCK GDFVIIINADKISLSGDKLTKKFAYSHSGYPGGLRKRAIGDLLAKHPTRV
Mvan_1469|M.vanbaalenii_PYR-1 GDFVIVINADKIALSGDKLNKKFAYRHSGYPGGLRKRSIGELLQKHPTRV
MSMEG_1556|M.smegmatis_MC2_155 GDFVIVINADKIAVSGDKLTKKFAYRHSGYPGGLRKRTIGELLEKHPTRV
MAB_3752c|M.abscessus_ATCC_199 GDFVIIINAEKIALSGNKLTNKFAYRHSGFPGGLSKRSIGEQLEKFPTRT
MUL_0864|M.ulcerans_Agy99 GDFVIVINADKVAISNEKLRNKRAYSHSGYPGGLRKRSIGELMEKHPDRV
MMAR_1106|M.marinum_M GDFVIVINADKVAISNEKLRNKMAYSHSGYPGGLRKRSIGELMEKHPDRV
Mb3473c|M.bovis_AF2122/97 GDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRV
Rv3443c|M.tuberculosis_H37Rv GDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRV
MLBr_00364|M.leprae_Br4923 GDFVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRV
MAV_4386|M.avium_104 GDFVIVVNADKVAFSGQKLDKKLAYRHSGYPGGLRSRTIGELMQKHPDRV
TH_1197|M.thermoresistible__bu GDFVIIVNAEKVSMSGNKPERTFYYRHSGYPGGLRVRSLGDMLRRHPERV
*****::**:*::.*.:* .. * ***:**** *::*: : :.* *.
Mflv_4950|M.gilvum_PYR-GCK VENAITGMLPHTKLGRQIQKKLKVYAGPEHPHTAQQPVPFEIKQVAQ
Mvan_1469|M.vanbaalenii_PYR-1 VENAIVGMLPHNKLSRQVQKKLKVYAGPEHPHSAQQPVPFEIKQVAQ
MSMEG_1556|M.smegmatis_MC2_155 VENAIIGMLPHNKLGRQIQKKLKVYAGPDHPHAAQQPIPFEIKQVAQ
MAB_3752c|M.abscessus_ATCC_199 VEKAIVGMLPKNKLGRQIERKLKVYAGAEHPHAAQQPIPFEIKQVAQ
MUL_0864|M.ulcerans_Agy99 VEKAIVGMLPKNKLSRQIQSKLRVYAGPGHPHTAQQPVPFEIKQVAQ
MMAR_1106|M.marinum_M VEKAIVGMLPKNKLSRQIQSKLRVYAGPEHPHTAQQPVPFEIKQVAQ
Mb3473c|M.bovis_AF2122/97 VEKAILGMLPKNRLSRQIQRKLRVYAGPEHPHSAQQPVPYELKQVAQ
Rv3443c|M.tuberculosis_H37Rv VEKAILGMLPKNRLSRQIQRKLRVYAGPEHPHSAQQPVPYELKQVAQ
MLBr_00364|M.leprae_Br4923 VEKAIVGMLPKNKLSRQIQRKLRVYAGPDHPHSAQQPVPFEIKQVAQ
MAV_4386|M.avium_104 VADAIVGMLPKNKLSRQIQRKLRVYAGPEHPHTAQQPIPYEIKQVAQ
TH_1197|M.thermoresistible__bu VEKAIVGMLPKTKLGRQMKTKLRVYAGPDHPHAAQQPVPYEIKQVTQ
* .** ****:.:*.**:: **:****. ***:****:*:*:***:*