For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_3752c (rplM)

annotation: 50S ribosomal protein L13
coordinates: 3806586 - 3807029
length: 147

PTYTPKAGDVTRTWYVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDGGDFVIIINAEKIALSGNKLTN
KFAYRHSGFPGGLSKRSIGEQLEKFPTRTVEKAIVGMLPKNKLGRQIERKLKVYAGAEHPHAAQQPIPFE
IKQVAQ*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_3752crplM-100% (147)50S ribosomal protein L13

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3473crplM8e-6776.87% (147) 50S ribosomal protein L13
M. gilvum PYR-GCKMflv_4950rplM1e-6680.27% (147) 50S ribosomal protein L13
M. tuberculosis H37RvRv3443crplM8e-6776.87% (147) 50S ribosomal protein L13
M. leprae Br4923MLBr_00364rplM7e-6676.87% (147) 50S ribosomal protein L13
M. marinum MMMAR_1106rplM1e-6780.95% (147) 50S ribosomal protein L13, RplM
M. avium 104MAV_4386rplM6e-6678.23% (147) 50S ribosomal protein L13
M. smegmatis MC2 155MSMEG_1556rplM6e-6982.31% (147) 50S ribosomal protein L13
M. thermoresistible (build 8)TH_1197rplM1e-6273.47% (147) PROBABLE 50S RIBOSOMAL PROTEIN L13 RPLM
M. ulcerans Agy99MUL_0864rplM1e-6680.27% (147) 50S ribosomal protein L13
M. vanbaalenii PYR-1Mvan_1469rplM5e-6982.31% (147) 50S ribosomal protein L13

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4950|M.gilvum_PYR-GCK          MSTYTPKAGDTTRSWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDG
Mvan_1469|M.vanbaalenii_PYR-1       MSTYTPKAGDTTRTWYVIDATDVVLGRLAVEAAKLLRGKHKPTFTPNVDG
MSMEG_1556|M.smegmatis_MC2_155      MPTYTPKAGDTTRSWYVIDASDVVLGRLASAAATLLRGKHKPTFTPNVDG
MAB_3752c|M.abscessus_ATCC_199      MPTYTPKAGDVTRTWYVIDATDVVLGRLAVQAANLLRGKHKPTFAPHVDG
Mb3473c|M.bovis_AF2122/97           MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
Rv3443c|M.tuberculosis_H37Rv        MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
MLBr_00364|M.leprae_Br4923          MPTYAPKAGDTTCSWYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDG
MMAR_1106|M.marinum_M               MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
MUL_0864|M.ulcerans_Agy99           MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
MAV_4386|M.avium_104                MPTYAPKAGDTTRSWYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDG
TH_1197|M.thermoresistible__bu      VPTYTPKAGDTTRSWYVIDATDVRLGRLAAAAATLLRGKHKPTYTPNVDG
                                    :.**:*****.* :******:** *****  **.*********::*:***

Mflv_4950|M.gilvum_PYR-GCK          GDFVIIINADKISLSGDKLTKKFAYSHSGYPGGLRKRAIGDLLAKHPTRV
Mvan_1469|M.vanbaalenii_PYR-1       GDFVIVINADKIALSGDKLNKKFAYRHSGYPGGLRKRSIGELLQKHPTRV
MSMEG_1556|M.smegmatis_MC2_155      GDFVIVINADKIAVSGDKLTKKFAYRHSGYPGGLRKRTIGELLEKHPTRV
MAB_3752c|M.abscessus_ATCC_199      GDFVIIINAEKIALSGNKLTNKFAYRHSGFPGGLSKRSIGEQLEKFPTRT
Mb3473c|M.bovis_AF2122/97           GDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRV
Rv3443c|M.tuberculosis_H37Rv        GDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRV
MLBr_00364|M.leprae_Br4923          GDFVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRV
MMAR_1106|M.marinum_M               GDFVIVINADKVAISNEKLRNKMAYSHSGYPGGLRKRSIGELMEKHPDRV
MUL_0864|M.ulcerans_Agy99           GDFVIVINADKVAISNEKLRNKRAYSHSGYPGGLRKRSIGELMEKHPDRV
MAV_4386|M.avium_104                GDFVIVVNADKVAFSGQKLDKKLAYRHSGYPGGLRSRTIGELMQKHPDRV
TH_1197|M.thermoresistible__bu      GDFVIIVNAEKVSMSGNKPERTFYYRHSGYPGGLRVRSLGDMLRRHPERV
                                    *****::**:*::.*.:*  ..  * ***:****  *::*: : :.* *.

Mflv_4950|M.gilvum_PYR-GCK          VENAITGMLPHTKLGRQIQKKLKVYAGPEHPHTAQQPVPFEIKQVAQ
Mvan_1469|M.vanbaalenii_PYR-1       VENAIVGMLPHNKLSRQVQKKLKVYAGPEHPHSAQQPVPFEIKQVAQ
MSMEG_1556|M.smegmatis_MC2_155      VENAIIGMLPHNKLGRQIQKKLKVYAGPDHPHAAQQPIPFEIKQVAQ
MAB_3752c|M.abscessus_ATCC_199      VEKAIVGMLPKNKLGRQIERKLKVYAGAEHPHAAQQPIPFEIKQVAQ
Mb3473c|M.bovis_AF2122/97           VEKAILGMLPKNRLSRQIQRKLRVYAGPEHPHSAQQPVPYELKQVAQ
Rv3443c|M.tuberculosis_H37Rv        VEKAILGMLPKNRLSRQIQRKLRVYAGPEHPHSAQQPVPYELKQVAQ
MLBr_00364|M.leprae_Br4923          VEKAIVGMLPKNKLSRQIQRKLRVYAGPDHPHSAQQPVPFEIKQVAQ
MMAR_1106|M.marinum_M               VEKAIVGMLPKNKLSRQIQSKLRVYAGPEHPHTAQQPVPFEIKQVAQ
MUL_0864|M.ulcerans_Agy99           VEKAIVGMLPKNKLSRQIQSKLRVYAGPGHPHTAQQPVPFEIKQVAQ
MAV_4386|M.avium_104                VADAIVGMLPKNKLSRQIQRKLRVYAGPEHPHTAQQPIPYEIKQVAQ
TH_1197|M.thermoresistible__bu      VEKAIVGMLPKTKLGRQMKTKLRVYAGPDHPHAAQQPVPYEIKQVTQ
                                    * .** ****:.:*.**:: **:****. ***:****:*:*:***:*