For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGQSVSAIRRVSRLRRHARLRKRIAGTQQRPRLVVHRSARHIHVQLVNDANGTTVAAASSIETDVRGLDG DKKARSVRVGQLIAERAKAADIDTVVFDRGGYTYGGRIAALADAARENGLKF
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0810 | rplR | - | 100% (122) | 50S ribosomal protein L18, RplR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0741 | rplR | 5e-56 | 86.89% (122) | 50S ribosomal protein L18 |
| M. gilvum PYR-GCK | Mflv_5031 | rplR | 2e-49 | 77.87% (122) | 50S ribosomal protein L18 |
| M. tuberculosis H37Rv | Rv0720 | rplR | 6e-56 | 86.89% (122) | 50S ribosomal protein L18 |
| M. leprae Br4923 | MLBr_01843 | rplR | 8e-55 | 86.67% (120) | 50S ribosomal protein L18 |
| M. abscessus ATCC 19977 | MAB_3796c | rplR | 2e-52 | 80.33% (122) | 50S ribosomal protein L18 |
| M. marinum M | MMAR_1051 | rplR | 3e-62 | 98.36% (122) | 50S ribosomal protein L18, RplR |
| M. avium 104 | MAV_4449 | rplR | 1e-56 | 90.16% (122) | 50S ribosomal protein L18 |
| M. smegmatis MC2 155 | MSMEG_1471 | rplR | 8e-53 | 81.97% (122) | 50S ribosomal protein L18 |
| M. thermoresistible (build 8) | TH_0307 | rplR | 1e-52 | 82.79% (122) | PROBABLE 50S RIBOSOMAL PROTEIN L18 RPLR |
| M. vanbaalenii PYR-1 | Mvan_1338 | rplR | 1e-49 | 78.69% (122) | 50S ribosomal protein L18 |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_0810|M.ulcerans_Agy99 ---------------MGQSVSAIRRVSRLRRHARLRKRIAGTQQRPRLVV
MMAR_1051|M.marinum_M --MAQTQADTAARKPVGQSVSATRRVSRLRRHARLRKRIAGTQQRPRLVV
MAV_4449|M.avium_104 ---------------MGQSVSATRRVSRLRRHARLRKKIAGTPERPRLVV
Mb0741|M.bovis_AF2122/97 ---------------MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVV
Rv0720|M.tuberculosis_H37Rv ---------------MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVV
MLBr_01843|M.leprae_Br4923 ---MQS-------------VSAIRRVSRLRRHARLRKKVSGTSERPRLVV
TH_0307|M.thermoresistible__bu ---MTSTETPRKHKPIGMSVSAARRRDRLRRHARLRKKIFGTPERPRLVV
Mflv_5031|M.gilvum_PYR-GCK MATKTN-TKETGHSPVGKNISETRRTSRLRRHARLRKKVSGTAERPRLVV
Mvan_1338|M.vanbaalenii_PYR-1 MATKTKSTEAAGHTPVGKNISETRRTSRLRRHARLRKKVSGTADRPRLVV
MSMEG_1471|M.smegmatis_MC2_155 ----------MAHKPVGQNISEVRRNARLRRHARLRKKVAGTAEVPRLVV
MAB_3796c|M.abscessus_ATCC_199 MTMAQTKTEAKQHEPVGKNISETRRVARIRRHARLRKKVSGTDARPRLVV
:* ** *:***:****:: ** *****
MUL_0810|M.ulcerans_Agy99 HRSARHIHVQLVNDANGTTVAAASSIETDVRGLDGDKKARSVRVGQLIAE
MMAR_1051|M.marinum_M HRSARHIHVQLVNDANGTTVAAASSIETDVRGLDGDKKARSVRVGQLIAE
MAV_4449|M.avium_104 NRSARHIHVQLVNDENGTTVAAASSIEDDVRSLQGDKKARSVRVGQLIAE
Mb0741|M.bovis_AF2122/97 HRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARSVRVGQLIAE
Rv0720|M.tuberculosis_H37Rv HRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARSVRVGQLIAE
MLBr_01843|M.leprae_Br4923 NRSARHIHVQLVNDVTGTTVAAASSIEADVRGLQGDKKVRSVRVGQLIAE
TH_0307|M.thermoresistible__bu HRSSRHIHVQLVNDLTGTTLAAASSIEPDVRAIEGDKKARSVRVGQLIAE
Mflv_5031|M.gilvum_PYR-GCK NRSSRHIHVQLVDDLAGVTLAAASSIEGDVRATDGDKKAASARVGQLIAE
Mvan_1338|M.vanbaalenii_PYR-1 NRSARHIHVQLVDDLEGVTLAAASSIEADVRAHEGDKKAASTRVGQLIAE
MSMEG_1471|M.smegmatis_MC2_155 NRSARHIHVQLVNDLNGTTLAAASSIEADVRAIDGDKKAHSVRVGQLIAE
MAB_3796c|M.abscessus_ATCC_199 NRSARHIHVQLVNDLTGTTLAAASSIEADVQAVDGDKKARSARVGQLIAE
:**:********:* *.*:******* **:. ****. *.********
MUL_0810|M.ulcerans_Agy99 RAKAADIDTVVFDRGGYTYGGRIAALADAARENGLKF
MMAR_1051|M.marinum_M RAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLKF
MAV_4449|M.avium_104 RAKAAGIDSVVFDRGGYTYGGRIAALADAARENGLQF
Mb0741|M.bovis_AF2122/97 RAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF
Rv0720|M.tuberculosis_H37Rv RAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF
MLBr_01843|M.leprae_Br4923 RAKAAGINTVVFDRGGYTYGGRIAALADSVRENGLNF
TH_0307|M.thermoresistible__bu RAKAAGIENVVFDRGGYTYGGRIAALADAARENGLNF
Mflv_5031|M.gilvum_PYR-GCK RAKAAGIEEVVFDRGGYTYGGRIAALADAARESGLKF
Mvan_1338|M.vanbaalenii_PYR-1 RAKAAGIDEVVFDRGGYTYGGRIAALADAAREGGLKF
MSMEG_1471|M.smegmatis_MC2_155 RAKAAGVETVVFDRGGYTYGGRIAALADAAREAGLKF
MAB_3796c|M.abscessus_ATCC_199 RAKAAGVDTVVFDRGGYTYGGRIAALADAARENGLVF
*****.:: *******************:.** ** *