For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_4449 (rplR)

annotation: 50S ribosomal protein L18
coordinates: 4583345 - 4583713
length: 122

GQSVSATRRVSRLRRHARLRKKIAGTPERPRLVVNRSARHIHVQLVNDENGTTVAAASSIEDDVRSLQGD
KKARSVRVGQLIAERAKAAGIDSVVFDRGGYTYGGRIAALADAARENGLQF*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_4449rplR-100% (122)50S ribosomal protein L18

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0741rplR9e-5687.70% (122) 50S ribosomal protein L18
M. gilvum PYR-GCKMflv_5031rplR4e-5180.33% (122) 50S ribosomal protein L18
M. tuberculosis H37RvRv0720rplR1e-5587.70% (122) 50S ribosomal protein L18
M. leprae Br4923MLBr_01843rplR4e-5588.33% (120) 50S ribosomal protein L18
M. abscessus ATCC 19977MAB_3796crplR4e-5381.97% (122) 50S ribosomal protein L18
M. marinum MMMAR_1051rplR5e-5891.80% (122) 50S ribosomal protein L18, RplR
M. smegmatis MC2 155MSMEG_1471rplR1e-5282.79% (122) 50S ribosomal protein L18
M. thermoresistible (build 8)TH_0307rplR2e-5485.25% (122) PROBABLE 50S RIBOSOMAL PROTEIN L18 RPLR
M. ulcerans Agy99MUL_0810rplR1e-5690.16% (122) 50S ribosomal protein L18, RplR
M. vanbaalenii PYR-1Mvan_1338rplR2e-5181.15% (122) 50S ribosomal protein L18

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1051|M.marinum_M               --MAQTQADTAARKPVGQSVSATRRVSRLRRHARLRKRIAGTQQRPRLVV
MUL_0810|M.ulcerans_Agy99           ---------------MGQSVSAIRRVSRLRRHARLRKRIAGTQQRPRLVV
MAV_4449|M.avium_104                ---------------MGQSVSATRRVSRLRRHARLRKKIAGTPERPRLVV
Mb0741|M.bovis_AF2122/97            ---------------MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVV
Rv0720|M.tuberculosis_H37Rv         ---------------MAQSVSATRRISRLRRHTRLRKKLSGTAERPRLVV
MLBr_01843|M.leprae_Br4923          ---MQS-------------VSAIRRVSRLRRHARLRKKVSGTSERPRLVV
TH_0307|M.thermoresistible__bu      ---MTSTETPRKHKPIGMSVSAARRRDRLRRHARLRKKIFGTPERPRLVV
Mflv_5031|M.gilvum_PYR-GCK          MATKTN-TKETGHSPVGKNISETRRTSRLRRHARLRKKVSGTAERPRLVV
Mvan_1338|M.vanbaalenii_PYR-1       MATKTKSTEAAGHTPVGKNISETRRTSRLRRHARLRKKVSGTADRPRLVV
MSMEG_1471|M.smegmatis_MC2_155      ----------MAHKPVGQNISEVRRNARLRRHARLRKKVAGTAEVPRLVV
MAB_3796c|M.abscessus_ATCC_199      MTMAQTKTEAKQHEPVGKNISETRRVARIRRHARLRKKVSGTDARPRLVV
                                                       :*  **  *:***:****:: **   *****

MMAR_1051|M.marinum_M               HRSARHIHVQLVNDANGTTVAAASSIETDVRGLDGDKKARSVRVGQLIAE
MUL_0810|M.ulcerans_Agy99           HRSARHIHVQLVNDANGTTVAAASSIETDVRGLDGDKKARSVRVGQLIAE
MAV_4449|M.avium_104                NRSARHIHVQLVNDENGTTVAAASSIEDDVRSLQGDKKARSVRVGQLIAE
Mb0741|M.bovis_AF2122/97            HRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARSVRVGQLIAE
Rv0720|M.tuberculosis_H37Rv         HRSARHIHVQLVNDLNGTTVAAASSIEADVRGVPGDKKARSVRVGQLIAE
MLBr_01843|M.leprae_Br4923          NRSARHIHVQLVNDVTGTTVAAASSIEADVRGLQGDKKVRSVRVGQLIAE
TH_0307|M.thermoresistible__bu      HRSSRHIHVQLVNDLTGTTLAAASSIEPDVRAIEGDKKARSVRVGQLIAE
Mflv_5031|M.gilvum_PYR-GCK          NRSSRHIHVQLVDDLAGVTLAAASSIEGDVRATDGDKKAASARVGQLIAE
Mvan_1338|M.vanbaalenii_PYR-1       NRSARHIHVQLVDDLEGVTLAAASSIEADVRAHEGDKKAASTRVGQLIAE
MSMEG_1471|M.smegmatis_MC2_155      NRSARHIHVQLVNDLNGTTLAAASSIEADVRAIDGDKKAHSVRVGQLIAE
MAB_3796c|M.abscessus_ATCC_199      NRSARHIHVQLVNDLTGTTLAAASSIEADVQAVDGDKKARSARVGQLIAE
                                    :**:********:*  *.*:******* **:.  ****. *.********

MMAR_1051|M.marinum_M               RAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLKF
MUL_0810|M.ulcerans_Agy99           RAKAADIDTVVFDRGGYTYGGRIAALADAARENGLKF
MAV_4449|M.avium_104                RAKAAGIDSVVFDRGGYTYGGRIAALADAARENGLQF
Mb0741|M.bovis_AF2122/97            RAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF
Rv0720|M.tuberculosis_H37Rv         RAKAAGIDTVVFDRGGYTYGGRIAALADAARENGLSF
MLBr_01843|M.leprae_Br4923          RAKAAGINTVVFDRGGYTYGGRIAALADSVRENGLNF
TH_0307|M.thermoresistible__bu      RAKAAGIENVVFDRGGYTYGGRIAALADAARENGLNF
Mflv_5031|M.gilvum_PYR-GCK          RAKAAGIEEVVFDRGGYTYGGRIAALADAARESGLKF
Mvan_1338|M.vanbaalenii_PYR-1       RAKAAGIDEVVFDRGGYTYGGRIAALADAAREGGLKF
MSMEG_1471|M.smegmatis_MC2_155      RAKAAGVETVVFDRGGYTYGGRIAALADAAREAGLKF
MAB_3796c|M.abscessus_ATCC_199      RAKAAGVDTVVFDRGGYTYGGRIAALADAARENGLVF
                                    *****.:: *******************:.** ** *