For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTTDSAVKIPPRLKERYRSEIRDVLHKQFGYGNVMQIPTVTKVVVNMGVGEAARDAKLINGAVSDLALI TGQRPEIRKARKSIAQFKLREGMPVGVRATLRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTF GLAEQPVFHEIDVDKIDRVRGMDINVVTSATTDEEGRALLRALGFPFKEN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0806 | rplE | - | 100% (190) | 50S ribosomal protein L5 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0737 | rplE | 7e-96 | 91.89% (185) | 50S ribosomal protein L5 |
M. gilvum PYR-GCK | Mflv_5035 | rplE | 4e-85 | 82.35% (187) | 50S ribosomal protein L5 |
M. tuberculosis H37Rv | Rv0716 | rplE | 7e-96 | 91.89% (185) | 50S ribosomal protein L5 |
M. leprae Br4923 | MLBr_01847 | rplE | 2e-94 | 90.27% (185) | 50S ribosomal protein L5 |
M. abscessus ATCC 19977 | MAB_3805c | rplE | 6e-85 | 81.58% (190) | 50S ribosomal protein L5 |
M. marinum M | MMAR_1047 | rplE | 1e-104 | 99.47% (190) | 50S ribosomal protein L5, RplE |
M. avium 104 | MAV_4453 | rplE | 1e-94 | 89.47% (190) | 50S ribosomal protein L5 |
M. smegmatis MC2 155 | MSMEG_1467 | rplE | 7e-85 | 80.00% (190) | 50S ribosomal protein L5 |
M. thermoresistible (build 8) | TH_0311 | rplE | 8e-89 | 85.95% (185) | PROBABLE 50S RIBOSOMAL PROTEIN L5 RPLE |
M. vanbaalenii PYR-1 | Mvan_1334 | rplE | 2e-86 | 83.16% (190) | 50S ribosomal protein L5 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5035|M.gilvum_PYR-GCK MTS--TETKTLPRLKQRYREEIREQLLKEFGYANVMQIPGVVKVVVNMGV Mvan_1334|M.vanbaalenii_PYR-1 MTT--TETKTLPRLKQRYREEIRDQLLKEFGYANVMQIPGVTKVVVNMGV TH_0311|M.thermoresistible__bu MTT--AE-KTLPRLKQRYREEIREALQKEFGYTNVMQIPTVVKVVVNMGV MSMEG_1467|M.smegmatis_MC2_155 MTT--TE-KALPRLKQRYREEIREALQQEFNYANVMQIPGVVKVVVNMGV MAB_3805c|M.abscessus_ATCC_199 MTT--TE-NAQPRLKTRYREEIKTALNDEFKYANVMQIPGVVKVVVNMGV MUL_0806|M.ulcerans_Agy99 MSTTDSAVKIPPRLKERYRSEIRDVLHKQFGYGNVMQIPTVTKVVVNMGV MMAR_1047|M.marinum_M MSTTDSAVKIPPRLKERYRSEIRDVLHKQFGYGNVMQIPTVTKVVVNMGV Mb0737|M.bovis_AF2122/97 MTT---AQKVQPRLKERYRSEIRDALRKQFGYGNVMQIPTVTKVVVNMGV Rv0716|M.tuberculosis_H37Rv MTT---AQKVQPRLKERYRSEIRDALRKQFGYGNVMQIPTVTKVVVNMGV MLBr_01847|M.leprae_Br4923 MST---AEKVQPRLKQRYRSEIREALNKQFSYGNVMQIPTVVKVVVNMGV MAV_4453|M.avium_104 MTT---TEKVQPRLKERYRNEIRDSLQQQFGYANVMQIPTVTKVVVNMGI *:: : **** ***.**: * .:* * ****** *.*******: Mflv_5035|M.gilvum_PYR-GCK GDAARDAKLINGAVNDLMLITGQKPEIRKARKSIAQFKLREGMPIGARVT Mvan_1334|M.vanbaalenii_PYR-1 GDAARDAKLINGAVNDLALITGQKPEIRRARKSIAQFKLREGMPIGARVT TH_0311|M.thermoresistible__bu GDAARDAKLINGAVNDLALITGQKPEIRRARKSIAQFKLREGMPIGARAT MSMEG_1467|M.smegmatis_MC2_155 GDAARDAKLINGAINDLALITGQKPEVRRARKSIAQFKLREGMPIGARVT MAB_3805c|M.abscessus_ATCC_199 GDAARDAKLINGAVTDLALITGQKPEIRKARKSIAQFKLREGMPIGARVT MUL_0806|M.ulcerans_Agy99 GEAARDAKLINGAVSDLALITGQRPEIRKARKSIAQFKLREGMPVGVRAT MMAR_1047|M.marinum_M GEAARDAKLINGAVSDLALITGQRPEIRKARKSIAQFKLREGMPVGVRAT Mb0737|M.bovis_AF2122/97 GEAARDAKLINGAVNDLALITGQKPEVRRARKSIAQFKLREGMPVGVRVT Rv0716|M.tuberculosis_H37Rv GEAARDAKLINGAVNDLALITGQKPEVRRARKSIAQFKLREGMPVGVRVT MLBr_01847|M.leprae_Br4923 GDAARDAKLINGAVSDLALITGQKPEVRKARKSIAQFKLREGMPIGVRVT MAV_4453|M.avium_104 GEAARDAKLINGAVNDLALITGQRPEIRRARKSIAQFKLREGMPIGARVT *:***********:.** *****:**:*:***************:*.*.* Mflv_5035|M.gilvum_PYR-GCK LRGDRMWEFLDRLISISLPRIRDFRGLSGKQFDGTGNYTFGLTEQSVFHE Mvan_1334|M.vanbaalenii_PYR-1 LRGDRMWEFLDRLISISLPRIRDFRGLSGKQFDGTGNYTFGLTEQSVFHE TH_0311|M.thermoresistible__bu LRGDRMWEFLDRLISIALPRIRDFRGLSPKQFDGTGNYTFGLTEQSVFHE MSMEG_1467|M.smegmatis_MC2_155 LRGDRMWEFLDRLISIALPRIRDFRGLSPKQFDGTGNYTFGLNEQSMFHE MAB_3805c|M.abscessus_ATCC_199 LRGDRMWEFLDRLVSIALPRIRDFRGLSPKQFDGKGNYTFGLTEQSMFHE MUL_0806|M.ulcerans_Agy99 LRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQPVFHE MMAR_1047|M.marinum_M LRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQSVFHE Mb0737|M.bovis_AF2122/97 LRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQAVFHE Rv0716|M.tuberculosis_H37Rv LRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQAVFHE MLBr_01847|M.leprae_Br4923 LRDDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQSVFHE MAV_4453|M.avium_104 LRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQSVFHE **.********** **:*********** ***** ******* **.:*** Mflv_5035|M.gilvum_PYR-GCK IDVDSIDRPRGMDITVVTSATNDDEGRALLRALGFPFKEN Mvan_1334|M.vanbaalenii_PYR-1 IDVDSIDRPRGMDITVVTSATNDDEGRALLRALGFPFKEN TH_0311|M.thermoresistible__bu IDVDSIDRPRGMDITVVTSATTDDEGRALLRALGFPFKEN MSMEG_1467|M.smegmatis_MC2_155 IDVDSIDRPRGMDITVVTTATNDAEGRALLRALGFPFKEN MAB_3805c|M.abscessus_ATCC_199 IDVDSIDRPRGMDITVVTSATTDDEGRALLRQLGFPFKEN MUL_0806|M.ulcerans_Agy99 IDVDKIDRVRGMDINVVTSATTDEEGRALLRALGFPFKEN MMAR_1047|M.marinum_M IDVDKIDRVRGMDINVVTSATTDEEGRALLRALGFPFKEN Mb0737|M.bovis_AF2122/97 VDVDKIDRVRGMDINVVTSAATDDEGRALLRALGFPFKEN Rv0716|M.tuberculosis_H37Rv VDVDKIDRVRGMDINVVTSAATDDEGRALLRALGFPFKEN MLBr_01847|M.leprae_Br4923 IDVDKIDRVRGMDINVVTSATTDDEGRALLRALGFPFKEN MAV_4453|M.avium_104 IDVDKIDRVRGMDINVVTSATTDDEGRALLRALGFPFKEN :***.*** *****.***:*:.* ******* ********