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MAAQNQSAQKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGG GRKPYRQKGTGRARQGSTRTPQFTGGGVVHGPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELV AGQTPSTKSAKTFLATITDRKQVLVVIGRDDQTGVKSVRNLPGVHILSPDQLNTYDVLRADDVVFSVEAL NAYIAANTSEEVSA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0791 | rplD | - | 100% (224) | 50S ribosomal protein L4 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0722 | rplD | 1e-107 | 87.17% (226) | 50S ribosomal protein L4 |
| M. gilvum PYR-GCK | Mflv_5048 | rplD | 1e-94 | 81.69% (213) | 50S ribosomal protein L4 |
| M. tuberculosis H37Rv | Rv0702 | rplD | 1e-107 | 87.17% (226) | 50S ribosomal protein L4 |
| M. leprae Br4923 | MLBr_01862 | rplD | 1e-105 | 82.61% (230) | 50S ribosomal protein L4 |
| M. abscessus ATCC 19977 | MAB_3819c | rplD | 6e-99 | 83.57% (213) | 50S ribosomal protein L4 |
| M. marinum M | MMAR_1032 | rplD | 1e-122 | 98.66% (224) | 50S ribosomal protein L4, RplD |
| M. avium 104 | MAV_4470 | rplD | 1e-106 | 88.84% (215) | 50S ribosomal protein L4 |
| M. smegmatis MC2 155 | MSMEG_1437 | rplD | 1e-100 | 83.96% (212) | 50S ribosomal protein L4 |
| M. thermoresistible (build 8) | TH_0406 | rplD | 4e-96 | 79.55% (220) | PROBABLE 50S RIBOSOMAL PROTEIN L4 RPLD |
| M. vanbaalenii PYR-1 | Mvan_1306 | rplD | 6e-99 | 81.94% (216) | 50S ribosomal protein L4 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0722|M.bovis_AF2122/97 MAAQEQ---KTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQ
Rv0702|M.tuberculosis_H37Rv MAAQEQ---KTLKIDVKTPAGKVDGAIELPAELFDVPANIALMHQVVTAQ
MAV_4470|M.avium_104 ---------MALKLDVKAPGGKVEGSIELPAELFDAPANIALMHQVVTAQ
MUL_0791|M.ulcerans_Agy99 MAAQNQSAQKDLEIQVKAPDGKVDGSVVLPAELFDVPANIALMHQVVTAQ
MMAR_1032|M.marinum_M MAAQNQSAQKDLEIQVKTPDGKVDGSVALPAELFDVPANIALMHQVVTAQ
MAB_3819c|M.abscessus_ATCC_199 -----------MKIAVKAPGGKTDGSIELPAELFDAPANIALLHQVVTAQ
MLBr_01862|M.leprae_Br4923 MAAKVENGSNIRKIDVKTPDGKVDGTIELPAELFDAPANIALMHQVVTAQ
Mflv_5048|M.gilvum_PYR-GCK ------MAN--KTIDVVTPAGKKDGTVELPAALFDAEPNIALMHQVVTAQ
Mvan_1306|M.vanbaalenii_PYR-1 ------MTSEDRKIPVRTPAGKTDGSIELPAELFDVEPNIALMHQVVNAQ
MSMEG_1437|M.smegmatis_MC2_155 ---------MTLKVDVKTPAGKTDGSVELPAELFDVEPNIALMHQVVTAQ
TH_0406|M.thermoresistible__bu -----------MKIDVRTPAGKTEGSVELPAELFDVEPNIALMHQVVTAQ
: * :* ** :*:: *** ***. .****:****.**
Mb0722|M.bovis_AF2122/97 RAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVH
Rv0702|M.tuberculosis_H37Rv RAAARQGTHSTKTRGEVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVH
MAV_4470|M.avium_104 RAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVH
MUL_0791|M.ulcerans_Agy99 RAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRARQGSTRTPQFTGGGVVH
MMAR_1032|M.marinum_M RAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRARQGSTRAPQFTGGGVVH
MAB_3819c|M.abscessus_ATCC_199 LAAGRQGTHSTKTRGLVSGGGKKPYRQKGTGRARQGSTRAPQFTGGGIVH
MLBr_01862|M.leprae_Br4923 RAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRARQGSMRAPQFTGGGIVH
Mflv_5048|M.gilvum_PYR-GCK LAAKRQGTHATKTRAMVSGGGKKPYRQKGTGRARQGSTRAPQFTGGGVVH
Mvan_1306|M.vanbaalenii_PYR-1 LAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQFTGGGIVH
MSMEG_1437|M.smegmatis_MC2_155 LAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQFTGGGTVH
TH_0406|M.thermoresistible__bu LAAARQGTHSTKTRGEVRGGGRKPWRQKGTGRARQGSLRAPQFTGGGVVH
** *****:****. * ***:**:************ *:******* **
Mb0722|M.bovis_AF2122/97 GPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVEGQNPSTKSA
Rv0702|M.tuberculosis_H37Rv GPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVEGQNPSTKSA
MAV_4470|M.avium_104 GPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAITELVSGQTPSTKSA
MUL_0791|M.ulcerans_Agy99 GPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQTPSTKSA
MMAR_1032|M.marinum_M GPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQTPSTKSA
MAB_3819c|M.abscessus_ATCC_199 GPQPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVAGQEPSTKSA
MLBr_01862|M.leprae_Br4923 GPKLRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVVGKTPSTKSA
Mflv_5048|M.gilvum_PYR-GCK GPQPRDYSQRTPKKMIAAALRSALSDRARNDRIHAITEVVEGQSPSTKSA
Mvan_1306|M.vanbaalenii_PYR-1 GPKPRDYSERTPKKMIRAALRGALSDRARNDRIHAITEIVEGQTPSTKSA
MSMEG_1437|M.smegmatis_MC2_155 GPKPRDYSQRTPKKMIAAALRGALSDRARNDRIHAVTELVEGQTPSTKSA
TH_0406|M.thermoresistible__bu GPKPRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVEGQTPSTKKA
**: ****:******* ****.********.****:**:* *: ****.*
Mb0722|M.bovis_AF2122/97 RAFLASLTERK-----QVLVVIGRSDEAGAKSVRNLPGVHILAPDQLNTY
Rv0702|M.tuberculosis_H37Rv RAFLASLTERK-----QVLVVIGRSDEAGAKSVRNLPGVHILAPDQLNTY
MAV_4470|M.avium_104 KAFLGTLTERK-----QVLVVIGRSDEAGAKSVRNLPGVHILAPDQLNTY
MUL_0791|M.ulcerans_Agy99 KTFLATITDRK-----QVLVVIGRDDQTGVKSVRNLPGVHILSPDQLNTY
MMAR_1032|M.marinum_M KTFLATITDRK-----QVLVVIGRDDQTGVKSVRNLPGVHILSPDQLNTY
MAB_3819c|M.abscessus_ATCC_199 KSFLGEITDRK-----QLLVVLGRDDLASVKSVRNLPNVHVLAYDQLNTY
MLBr_01862|M.leprae_Br4923 KEFLGTLTDRK-----QVLVVIGRSDETGAKSVRNLPGVHLLSPDQLNTY
Mflv_5048|M.gilvum_PYR-GCK KAFLATLTDRK-----QVLVVIGRADETSALSVRNLPGVHVISPDQLNTY
Mvan_1306|M.vanbaalenii_PYR-1 KSFLATLTDRR-----QVLVVIGRADEASALSVRNLPGVHVISPDQLNTY
MSMEG_1437|M.smegmatis_MC2_155 KTFLGTLTENK-----KVLVVIGRTDEVGAKSVRNLPGVHVISPDQLNTY
TH_0406|M.thermoresistible__bu KAFLSTVIADRTVEKDKVLVVIGRTDETSIRSVRNLPGVHVIAPDQLNTY
: **. : : ::***:** * .. ******.**::: ******
Mb0722|M.bovis_AF2122/97 DVLRADDVVFSVEALNAYIAAN----TTTSEEVSA
Rv0702|M.tuberculosis_H37Rv DVLRADDVVFSVEALNAYIAAN----TTTSEEVSA
MAV_4470|M.avium_104 DVLRADDVVFSVEALRAYIAAN----TGTPEEVSA
MUL_0791|M.ulcerans_Agy99 DVLRADDVVFSVEALNAYIAAN------TSEEVSA
MMAR_1032|M.marinum_M DVLRADDVVFSVEALNAYIAAN------TSEEVSA
MAB_3819c|M.abscessus_ATCC_199 DVLKADDVVFSVEALNGFINAK------KKEEVSA
MLBr_01862|M.leprae_Br4923 DVLRADDLVFSVEALNSYIAAQQAAGTSTPEKVSA
Mflv_5048|M.gilvum_PYR-GCK DVLKADDVVFSVEALNAYIAAA----TKTTEEVSA
Mvan_1306|M.vanbaalenii_PYR-1 DVLKADDVVFSVEALNAYIAAN----TKT-EEVSA
MSMEG_1437|M.smegmatis_MC2_155 DVLNADDVVFSVEALNAYISAN----SKEGASV--
TH_0406|M.thermoresistible__bu DVLKADDVVFSVEALNAYISAN----TSTAKEVSA
***.***:*******..:* * .*