For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NRFLTSIVSWLRAGYPDGVPPTDSFALLALLCRRLSNEDVTTVATELMRRGEFDQIDIGVAITQITDDLP SPEDIERVRARLAATGWPLDDAREDRA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0642 | - | - | 100% (98) | hypothetical protein MUL_0642 |
M. ulcerans Agy99 | MUL_1884 | - | 4e-12 | 40.66% (91) | hypothetical protein MUL_1884 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0557c | - | 8e-42 | 78.95% (95) | hypothetical protein Mb0557c |
M. gilvum PYR-GCK | Mflv_0032 | - | 8e-29 | 58.82% (102) | hypothetical protein Mflv_0032 |
M. tuberculosis H37Rv | Rv0543c | - | 9e-42 | 78.95% (95) | hypothetical protein Rv0543c |
M. leprae Br4923 | MLBr_02258 | - | 2e-37 | 71.88% (96) | hypothetical protein MLBr_02258 |
M. abscessus ATCC 19977 | MAB_3951 | - | 2e-35 | 72.63% (95) | hypothetical protein MAB_3951 |
M. marinum M | MMAR_0889 | - | 1e-52 | 100.00% (98) | hypothetical protein MMAR_0889 |
M. avium 104 | MAV_4601 | - | 1e-27 | 71.62% (74) | hypothetical protein MAV_4601 |
M. smegmatis MC2 155 | MSMEG_1063 | - | 3e-29 | 58.95% (95) | hypothetical protein MSMEG_1063 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0938 | - | 7e-30 | 58.25% (103) | hypothetical protein Mvan_0938 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0032|M.gilvum_PYR-GCK -------------------------------MTKFLARIVAWIVEGYPEG Mvan_0938|M.vanbaalenii_PYR-1 -------------------------------MTRFLARIVAWIAAGYPEG MUL_0642|M.ulcerans_Agy99 -------------------------------MNRFLTSIVSWLRAGYPDG MMAR_0889|M.marinum_M -------------------------------MNRFLTSIVSWLRAGYPDG Mb0557c|M.bovis_AF2122/97 -------------------------------MNRFLTSIVAWLRAGYPEG Rv0543c|M.tuberculosis_H37Rv -------------------------------MNRFLTSIVAWLRAGYPEG MLBr_02258|M.leprae_Br4923 -------------------------------MNRFLTSIVSWLRAGYPEG MAV_4601|M.avium_104 -------------------------------------------------- MAB_3951|M.abscessus_ATCC_1997 MAGDNGQQQHYDRYSVDKIQDGRPSLQELEAVNAFLNKIVTWLRAGYPEG MSMEG_1063|M.smegmatis_MC2_155 -------------------------------MNAFLAKIAAWLNAGYPEG Mflv_0032|M.gilvum_PYR-GCK VPGPDRVPLLALLRRRLTDDEVRAVVTELRTRAELTD--TPGIDTVDIGV Mvan_0938|M.vanbaalenii_PYR-1 IPGADRIPLLALLRRRLTDDEVKAVVAELIARAEFGERGSVDIDPVDIGV MUL_0642|M.ulcerans_Agy99 VPPTDSFALLALLCRRLSNEDVTTVATELMRRGEFDQ--------IDIGV MMAR_0889|M.marinum_M VPPTDSFALLALLCRRLSNEDVTTVATELMRRGEFDQ--------IDIGV Mb0557c|M.bovis_AF2122/97 IPPTDSFAVLALLCRRLSHDEVKAVANELMRLGDFDQ--------IDIGV Rv0543c|M.tuberculosis_H37Rv IPPTDSFAVLALLCRRLSHDEVKAVANELMRLGDFDQ--------IDIGV MLBr_02258|M.leprae_Br4923 IPATDTFAVLALLARRLTNDEVKLVARELIRRGEFDK--------IDIGV MAV_4601|M.avium_104 MPPTDTFPVLALLARRLSGDEVKDVASELIRRGEFDD--------VDIGV MAB_3951|M.abscessus_ATCC_1997 VPPPDYVPLLALLGRRLSNDEVKTVARELMARGDFDN--------IDIGV MSMEG_1063|M.smegmatis_MC2_155 VPGPDRVPLLALLTRRLTNDEIKAIAEDLEKRAHFDH--------IDIGV :* .* ..:**** ***: ::: :. :* ..: . :**** Mflv_0032|M.gilvum_PYR-GCK LITEITDGLPSPDDIERVRARLAAQGWPLDDSRDEEDT------------ Mvan_0938|M.vanbaalenii_PYR-1 LITQITDELPSPDDVERVRARLAAQGWPLDDPRDAEEDR----------- MUL_0642|M.ulcerans_Agy99 AITQITDDLPSPEDIERVRARLAATGWPLDDAR--EDRA----------- MMAR_0889|M.marinum_M AITQITDDLPSPEDIERVRARLAATGWPLDDAR--EDRA----------- Mb0557c|M.bovis_AF2122/97 VITHFTDELPSPEDVERVRARLAAQGWPLDDVRDREEHA----------- Rv0543c|M.tuberculosis_H37Rv VITHFTDELPSPEDVERVRARLAAQGWPLDDVRDREEHA----------- MLBr_02258|M.leprae_Br4923 MISHLTDELPSPQDIERVRTRLNAKGWLLDNARDNGEPT----------- MAV_4601|M.avium_104 LITQITDELPTPDDVERVRVRLAAQGWPFDDADQAGDPA----------- MAB_3951|M.abscessus_ATCC_1997 LITQITDELPTGEDIERIRERLAKKGWPLDDPREPADHGEEPGSGQATDH MSMEG_1063|M.smegmatis_MC2_155 LITQMTDEMPREEDIERVRRHLALQGWPLDDPRDGEEPDGESGGPR---- *:.:** :* :*:**:* :* ** :*: : Mflv_0032|M.gilvum_PYR-GCK -- Mvan_0938|M.vanbaalenii_PYR-1 -- MUL_0642|M.ulcerans_Agy99 -- MMAR_0889|M.marinum_M -- Mb0557c|M.bovis_AF2122/97 -- Rv0543c|M.tuberculosis_H37Rv -- MLBr_02258|M.leprae_Br4923 -- MAV_4601|M.avium_104 -- MAB_3951|M.abscessus_ATCC_1997 PA MSMEG_1063|M.smegmatis_MC2_155 --