For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KIANQFTVSAPIEQAWDVLCDLEQVIPLMPGAQLTGHQDDDYLGKVKVKVGPVTSEFSGKVHFVERDRDQ HRAVIDAKGKESRGTGNAAATVTAQLAEAGERTQVTVDTDLKIVGKLAQFGSGMLQQVSEKLIGQFVDSL EAELASRNAATAAPESPESPGSPESPVSPQPRPVEARKPTTSAEPEPIDLLELAGGDQLKKYGPAVLAVL AVLVLIWVLRRRR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0111 | - | - | 100% (224) | membrane oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0376c | - | 1e-69 | 72.31% (195) | membrane oxidoreductase |
| M. gilvum PYR-GCK | Mflv_1572 | - | 6e-39 | 40.17% (229) | carbon monoxide dehydrogenase subunit G |
| M. tuberculosis H37Rv | Rv0369c | - | 1e-69 | 72.31% (195) | membrane oxidoreductase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_0661 | - | 1e-124 | 99.11% (224) | membrane oxidoreductase |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0749 | - | 8e-80 | 66.52% (224) | carbon monoxide dehydrogenase subunit G (CoxG) family protein |
| M. thermoresistible (build 8) | TH_1270 | - | 5e-47 | 44.84% (223) | putative carbon monoxide dehydrogenase subunit G |
| M. vanbaalenii PYR-1 | Mvan_5184 | - | 2e-40 | 41.07% (224) | carbon monoxide dehydrogenase subunit G |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_0111|M.ulcerans_Agy99 MKIANQFTVSAPIEQAWDVLCDLEQVIPLMPGAQLTGHQDDDYLGKVKVK
MMAR_0661|M.marinum_M MKIANQFTVSAPIEQAWDVLCDLEQVIPLMPGAQLTGHQDDDYLGKVKVK
Mb0376c|M.bovis_AF2122/97 -----------------------------MPGAQLIGHEGDEYLGKVKVK
Rv0369c|M.tuberculosis_H37Rv -----------------------------MPGAQLIGHEGDEYLGKVKVK
MSMEG_0749|M.smegmatis_MC2_155 MKIANEFTVSVPIEDAWDLLTDLDQVVPLMPGARLTGHDGDDVLGAVKVK
Mflv_1572|M.gilvum_PYR-GCK MELNNEFRVAVPSAKVWEMFTDGERVAPCLPGATLLSTEGDTFHGSVKVK
Mvan_5184|M.vanbaalenii_PYR-1 MELNNEFRVAVPAATVWDVFTDVERVAPCLPGATLLSIDGDTFNGAVKVK
TH_1270|M.thermoresistible__bu VELINEFRVPVPAEQAWDVLTDVERIAPCIPGATLLSVDGDDFTGQVKVK
:*** * . :.* * ****
MUL_0111|M.ulcerans_Agy99 VGPVTSEFSGKVHFVERDRDQHRAVIDAKGKESRGTGNAAATVTAQLAEA
MMAR_0661|M.marinum_M VGPVTSEFSGKVHFVERDRDQHRAVIDAKGKESRGTGNAAATVTAQLAEA
Mb0376c|M.bovis_AF2122/97 VGPVTSEFSGKVHFVEQDRNQHRAVFDAKGKEARGTGNAAATVAAQLHEV
Rv0369c|M.tuberculosis_H37Rv VGPVTSEFSGKVHFVEQDRNQHRAVFDAKGKEARGTGNAAATVAAQLHEV
MSMEG_0749|M.smegmatis_MC2_155 VGPVTSEFAGKVHFVEQDREHFRAVIDAKGKETRGTGNAAATVTAQLHEA
Mflv_1572|M.gilvum_PYR-GCK VGPITVSYKGTATYKEKDAAGQRIVLRAEGKETRGSGTAAATVTAQLKDE
Mvan_5184|M.vanbaalenii_PYR-1 VGPITVSYKGVASYQEKDAVARRIVLRAEGKETRGNGTAAATVTAQLKDE
TH_1270|M.thermoresistible__bu VGPITVQYKGKASFEQKDTAARRAVIRANGKETRGQGNAAAVVTAELKEE
***:* .: * . : ::* * *: *:***:** *.***.*:*:* :
MUL_0111|M.ulcerans_Agy99 GERTQVTVDTDLKIVGKLAQFGSGMLQQVSEKLIGQFVDSLEAELASRNA
MMAR_0661|M.marinum_M GERTQVTVDTDLKIVGKLAQFGSGMLQQVSEKLLGQFVDSLEAELASRNA
Mb0376c|M.bovis_AF2122/97 GERTRVTVDTDLKIVGKLAQFGSGMLQQVSEKLLGQFVDSLEAELAAQ--
Rv0369c|M.tuberculosis_H37Rv GERTRVTVDTDLKIVGKLAQFGSGMLQQVSEKLLGQFVDSLEAELAAQ--
MSMEG_0749|M.smegmatis_MC2_155 GTSTRVTVDTDLKVVGKLAQFGSGMLQQVSEKLLGQFVDSLEAKLAGERE
Mflv_1572|M.gilvum_PYR-GCK GDSTHVAIVTDLAISGKAAQFGRGVLADVSGNLIAQFARSLEAELLGG--
Mvan_5184|M.vanbaalenii_PYR-1 GESTYVGIVTDLAISGKAAQFGRGVLADVSSNLIAQFARSLEAELLGG--
TH_1270|M.thermoresistible__bu GDSTLCILTTDLTISGKAAQFGRGVLADVAGKLIGQFAERLEADVLSQHT
* * : *** : ** **** *:* :*: :*:.**. ***.: .
MUL_0111|M.ulcerans_Agy99 ATAAPESPESPGSPESPVSPQPRPVEARKPTTSAEPEPIDLLELAGGDQL
MMAR_0661|M.marinum_M ATAAPESPESPGSPESPASPQPRPVEARKPTTSAEPEPIDLLELAGGDQL
Mb0376c|M.bovis_AF2122/97 ---SSESPQ--GTP---------------PATEAAP--IDLLQLADGGQL
Rv0369c|M.tuberculosis_H37Rv ---SSESPQ--GTP---------------PATEAAP--IDLLQLADGGQL
MSMEG_0749|M.smegmatis_MC2_155 --KPSETTQTPQTPVAQAAEKPQETLASTAPAVADPEPIDLLDLAGGAAL
Mflv_1572|M.gilvum_PYR-GCK ---AAPASAGSAAAAPTHTTQAPSAETAAAAAQPGGDSVDLLKVVAVPMA
Mvan_5184|M.vanbaalenii_PYR-1 ---AAPSGQASENGS------APAAS--VAAAPPAEDSVDLLKVVAVPMA
TH_1270|M.thermoresistible__bu ---TAPAPQGSADEP----AVQPAPVAAPTQAPAADASVNMLALVAVPIA
.. : . : . :::* :.
MUL_0111|M.ulcerans_Agy99 KKYGPAVLAVLAVLVLIWVLR--RRR--------------------
MMAR_0661|M.marinum_M KKYGPAVLAVLAVLVLIWVLR--RRR--------------------
Mb0376c|M.bovis_AF2122/97 KKYGSALLAALTVLLLIWVLR--RRR--------------------
Rv0369c|M.tuberculosis_H37Rv KKYGSALLAALTVLLLIWVLR--RRR--------------------
MSMEG_0749|M.smegmatis_MC2_155 KKYGPAVAGAFLLAALLFTIG--RLRMARKALRGR-----------
Mflv_1572|M.gilvum_PYR-GCK KRFAPVLVAATVAGAVGFLIGSRRRRKTPAAVLADDLQAVLARLLS
Mvan_5184|M.vanbaalenii_PYR-1 KRYAPVLAAAAVAGVIGYLIG-RRRRRGPAAVLADDLQAALARLLS
TH_1270|M.thermoresistible__bu KRVAPVAAGLAVGLALGWVLG---RRSGGAA---------------
*: ... . : : : *