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M. smegmatis MC2 155 MSMEG_6804 (-)

FRKVTRNTRTVGAALMAGSLVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAV
AGAFDGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDAVDATFATD
NKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGLTDNSPEIVGQENTNGDQTKAQT
AMENLLQRAPGVNALYTINEPAAAGAYQAIQAVGRADQVTIGSIDGSCTGVADVKAGKIGATVMQFPAKM
AELGVQAVVKFAEDGTKPSGFNDTGSELITDKPMPGLESKDTAWGEQNCWG*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_6804	-	-	100% (332)	sugar ABC transporter substrate-binding protein
M. smegmatis MC2 155	MSMEG_3095	-	1e-25	28.39% (317)	D-ribose-binding periplasmic protein
M. smegmatis MC2 155	MSMEG_1712	-	1e-18	27.87% (287)	ABC transporter periplasmic-binding protein YtfQ

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_2605	-	7e-11	24.29% (317)	periplasmic binding protein/LacI transcriptional regulator
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	MLBr_00398	-	6e-14	24.63% (268)	putative D-ribose-binding protein
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_5293	-	2e-14	27.01% (311)	solute-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_6804|M.smegmatis_MC2_155      --MFRKVTRNTRTVGAALMAGSLVLGMT--------ACGGSGSDGVKVGL
Mvan_5293|M.vanbaalenii_PYR-1       --MKRTSSLLFTAVVGVGLTLTACGSNS--------DSGSTEARSGKVGV
Mflv_2605|M.gilvum_PYR-GCK          MTFKRLAAIAGAGVLAFGVVSCSSTGGAPRESGEGGGGGTVDTPRMTIAM
MLBr_00398|M.leprae_Br4923          --MSTGTSVPLRVASIMLILGLLPAILP--------ACGFSESHHKLTIG
                                      :    :     .    :        .          *   :       

MSMEG_6804|M.smegmatis_MC2_155      ITKTDSNPYFVHLREA-AQAQADKDGAQLIAVAGAFDGDNEGQVTAIENM
Mvan_5293|M.vanbaalenii_PYR-1       ILPDTKSSVRWETKDR-PALAAAFQNAGVDYTIQNAEGSADTMATIADGM
Mflv_2605|M.gilvum_PYR-GCK          ITHEVPGDSFWDLVRKGAEAAAQKDNVELRYSN---DPEAPNQANLVQAA
MLBr_00398|M.leprae_Br4923          VSYPTANSPFWNAYTRFIDEGSHQLGVYINAVS--AEEDEQKQLSDVETL
                                    :     .    .         :   .. :       : .     .  :  

MSMEG_6804|M.smegmatis_MC2_155      VGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALD--TATDPEDAVDAT
Mvan_5293|M.vanbaalenii_PYR-1       IADGVTVLAIVNLDSDSGASIQQKAASQGVKTIDYD--RLTLG-GSADVY
Mflv_2605|M.gilvum_PYR-GCK          IDSNVDGIAVTLAKPDAMQAAVKAAEAKGIPVVAFN--AGMDSWKAMGVK
MLBr_00398|M.leprae_Br4923          INQGIDGLIVTPQSTSIAPTLLRIATQANIPVVVVDRYPGYAPGQNKNAD
                                    : ..:  : :.  ..       : *   .: .:  :           .. 

MSMEG_6804|M.smegmatis_MC2_155      FATDNKAAGVAQGKWVKAALGNT-PPQVVMLDGTPGGTVDTFRHDGFLEG
Mvan_5293|M.vanbaalenii_PYR-1       VSFDNNVVGELQGQGLVDCLGGR-PANVVFLNGSPTDNNATLFSSGAHSV
Mflv_2605|M.gilvum_PYR-GCK          EYFG--QDGRIAGQGVGDRLRAEGATKAVCIVQEQGHVDLEARCAGVRET
MLBr_00398|M.leprae_Br4923          YVAFLGPNNEKAGSGIAEALMAGGGSKFLALGGMPGNSVAQGRKAGLES-
                                            .   *. :   *     .: : :              *  . 

MSMEG_6804|M.smegmatis_MC2_155      FGLTDNSPEIVGQENTNGDQTKAQTAMENLLQRAPG--VNALYTINEPAA
Mvan_5293|M.vanbaalenii_PYR-1       VDATPSITIVGEQAVPDWDNDKAVTIFEQLYTAADGR-VDGVYAANDGLA
Mflv_2605|M.gilvum_PYR-GCK          FPATEVLN------VNGKDMPSVESTITAKLQQDPS--IDYLVALGAPFA
MLBr_00398|M.leprae_Br4923          -ALTAVGHRLVQFQYAGDSEDKGLAAAENMLQAHPAGDANAIWCFNDKLC
                                       *            . .  .  :          .   : :   .   .

MSMEG_6804|M.smegmatis_MC2_155      AGAYQAIQAVGRADQVTIGSIDGSCTGVADVKAGKIGATVMQFPAKMAEL
Mvan_5293|M.vanbaalenii_PYR-1       GSVISILEKNKRAGQVPVTGQDATVEGLQNILAGTQCMTVYKSATEEANA
Mflv_2605|M.gilvum_PYR-GCK          LTAVQSAKNAG--STAKIGTFDTNAALVSAIQAGDVQWAVDQQPYLQGYL
MLBr_00398|M.leprae_Br4923          QGAIKAVYNANREKEFIFGGMDLTPQAIAAIENGLYTVSLG-AHWLEGGF
                                      . .            .   * .   :  :  *    ::       .  

MSMEG_6804|M.smegmatis_MC2_155      GVQAVVKFAEDG---TKPSGFNDTG-----SELITDKPMP----------
Mvan_5293|M.vanbaalenii_PYR-1       LAEVAIALANGEQPQTTSTSRDDTGGRDVPSVLLTPKSITKDNINVVFDD
Mflv_2605|M.gilvum_PYR-GCK          AVDSLWLYLSNGN-VIGGGQPTLTG-----PAFIDQSNID----------
MLBr_00398|M.leprae_Br4923          GLAILYRKIHGQDPAERMVKLDLLKVDKSNVAKFKARYID----------
                                              .                      :    :           

MSMEG_6804|M.smegmatis_MC2_155      GLESKDTAWG---EQNCWG---
Mvan_5293|M.vanbaalenii_PYR-1       GGQSKDEVCSGQFAEACSAAGV
Mflv_2605|M.gilvum_PYR-GCK          AVAEYAKAGTR-----------
MLBr_00398|M.leprae_Br4923          NTPHYNWKSTTPFDMTITLN--