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M. smegmatis MC2 155 MSMEG_1712 (-)

RKMFAAAIGVVAVAAAVTACGSGKAPGSEGGSAPDGALTLGFAQVGAESGWRTANTESIKSAAEEAGVNL
KFADANGEQEKQISAIRSFIQQGVDVIAFSPVVRTGWDAVLQETKNAGIPVILTDRAVDTQDTDVYKTFI
GADFIEEGRRAGQWVADQYASATGPVNIVQLEGTTGADPAIDRKTGFAEGISKNPNLKIVASQTGDFTRS
GGKQVMEAFLKSTPQIDVVFAQNDDMGLGAMEAIEAAGKKPGTDIKIVAVDATHDGMQALADGKFNYIVE
CNPLLGPELMDLAKKVAAGEPVPERVVTPDEAFDQAQAKAALPNRQY*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_1712	-	-	100% (328)	ABC transporter periplasmic-binding protein YtfQ
M. smegmatis MC2 155	MSMEG_3095	-	4e-37	31.94% (310)	D-ribose-binding periplasmic protein
M. smegmatis MC2 155	MSMEG_3598	-	1e-29	30.74% (309)	periplasmic sugar-binding proteins

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_2605	-	3e-11	25.17% (294)	periplasmic binding protein/LacI transcriptional regulator
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	MLBr_00398	-	2e-13	23.69% (287)	putative D-ribose-binding protein
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_5293	-	2e-14	23.90% (318)	solute-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_1712|M.smegmatis_MC2_155      ---MRKMFAAAIGVVAVAAAVTACGSGKAP----GSEGGSAPDGALTLGF
MLBr_00398|M.leprae_Br4923          ---MSTGTSVPLRVASIMLILGLLPAILP------ACGFSESHHKLTIGV
Mvan_5293|M.vanbaalenii_PYR-1       --MKRTSSLLFTAVVGVGLTLTACGSNSD------SGSTEARSGKVGVIL
Mflv_2605|M.gilvum_PYR-GCK          MTFKRLAAIAGAGVLAFGVVSCSSTGGAPRESGEGGGGGTVDTPRMTIAM
                                                 * ..        .         . .       : : .

MSMEG_1712|M.smegmatis_MC2_155      AQVGAESG-WRTANTESIKSAAEEAGVNLKFADANGEQEKQISAIRSFIQ
MLBr_00398|M.leprae_Br4923          SYPTANSP-FWNAYTRFIDEGSHQLGVYINAVSAEEDEQKQLSDVETLIN
Mvan_5293|M.vanbaalenii_PYR-1       PDTKSSVR-WETKDRPALAAAFQNAGVDYTIQNAEGSADTMATIADGMIA
Mflv_2605|M.gilvum_PYR-GCK          ITHEVPGDSFWDLVRKGAEAAAQKDNVELRYSNDP-EAPNQANLVQAAID
                                             :          . .: .*     .   .  .  .     * 

MSMEG_1712|M.smegmatis_MC2_155      QGVDVIAFSPVVRTGWDAVLQETKNAGIPVILTDRAVDTQDTDVYKTFIG
MLBr_00398|M.leprae_Br4923          QGIDGLIVTPQSTSIAPTLLRIATQANIPVVVVDRYPGYAPGQNKNADYV
Mvan_5293|M.vanbaalenii_PYR-1       DGVTVLAIVNLDSDSGASIQQKAASQGVKTIDYDRLTLGGSADVYVSFDN
Mflv_2605|M.gilvum_PYR-GCK          SNVDGIAVTLAKPDAMQAAVKAAEAKGIPVVAFNAGMDSWKAMG----VK
                                    ..:  : .         :  : :   .: .:  :                

MSMEG_1712|M.smegmatis_MC2_155      ADFIEEGRRAGQWVADQYASATGPVNIVQLEGTTGADPAIDRKTGFAEGI
MLBr_00398|M.leprae_Br4923          AFLGPNNEKAGSGIAEALMAGGG-SKFLALGGMPGNSVAQGRKAGLESAL
Mvan_5293|M.vanbaalenii_PYR-1       NVVG---ELQGQGLVDCLG--GRPANVVFLNGSPTDNNATLFSSGAHSVV
Mflv_2605|M.gilvum_PYR-GCK          EYFGQDGRIAGQGVGDRLR-AEGATKAVCIVQEQGHVDLEARCAGVRETF
                                      .    .  *. : :         : : :             :*  . .

MSMEG_1712|M.smegmatis_MC2_155      SKNPNLKIVASQTGDFTRSGGKQVMEAFLKSTPQ--IDVVFAQNDDMGLG
MLBr_00398|M.leprae_Br4923          TAVG-HRLVQFQYAGDSEDKGLAAAENMLQAHPAGDANAIWCFNDKLCQG
Mvan_5293|M.vanbaalenii_PYR-1       DATPSITIVGEQAVPDWDNDKAVTIFEQLYTAADGRVDGVYAANDGLAGS
Mflv_2605|M.gilvum_PYR-GCK          PATEVLNVNGKDMP-----SVESTITAKLQQDPS--IDYLVALGAPFALT
                                           :   :           .    *   .    : : . .  :   

MSMEG_1712|M.smegmatis_MC2_155      AMEAIEAAGKKPGTDIKIVAVDATHDGMQALADGKFNYIVECN-PLLGP-
MLBr_00398|M.leprae_Br4923          AIKAVYNANRE--KEFIFGGMDLTPQAIAAIENGLYTVSLGAH-WLEGG-
Mvan_5293|M.vanbaalenii_PYR-1       VISILEKNKRAG--QVPVTGQDATVEGLQNILAGTQCMTVYKS-ATEEAN
Mflv_2605|M.gilvum_PYR-GCK          AVQSAKNAGST----AKIGTFDTNAALVSAIQAGDVQWAVDQQPYLQGYL
                                    .:.              .   * .   :  :  *     :          

MSMEG_1712|M.smegmatis_MC2_155      ELMDLAKKVAAGEPVPERVVTPDEAFDQAQAKAALPNRQY----------
MLBr_00398|M.leprae_Br4923          FGLAILYRKIHGQDPAERMVKLDLLKVDKSNVAKFKARYIDNTPHYNWKS
Mvan_5293|M.vanbaalenii_PYR-1       ALAEVAIALANGEQPQTTSTSRDDTGGRDVPSVLLTPKSITKDNINVVFD
Mflv_2605|M.gilvum_PYR-GCK          AVDSLWLYLSNGNVIGGGQPTLTGPAFIDQSNIDAVAEYAKAGTR-----
                                        :      *:       .                .            

MSMEG_1712|M.smegmatis_MC2_155      -----------------------
MLBr_00398|M.leprae_Br4923          TTPFDMTITLN------------
Mvan_5293|M.vanbaalenii_PYR-1       DGGQSKDEVCSGQFAEACSAAGV
Mflv_2605|M.gilvum_PYR-GCK          -----------------------