For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AAPPDPIPPNAWAPARSLPMDDTQHWPDLASVAEPLDGRPFFAEEICGFNPSPKRQFSSDQARARVDRGP GRWSLQQQIVHFPGQVASSSERAGALFSSVVDALAKCPAQVPGTVVDVTTPPVPCAPQRCTQTAATVHAP DRVTAHLYLTAAGGSVSEVAVFAAGTPDVPWGAPADDAVLAAITGPVCAVWEC*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_6455 | - | - | 100% (194) | hypothetical protein MSMEG_6455 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0810 | - | 2e-20 | 32.32% (198) | hypothetical protein Mb0810 |
| M. gilvum PYR-GCK | Mflv_1623 | - | 2e-18 | 31.28% (195) | hypothetical protein Mflv_1623 |
| M. tuberculosis H37Rv | Rv0787 | - | 4e-20 | 30.61% (196) | hypothetical protein Rv0787 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4280c | - | 3e-14 | 27.55% (196) | hypothetical protein MAB_4280c |
| M. marinum M | MMAR_4900 | - | 8e-19 | 32.65% (196) | hypothetical protein MMAR_4900 |
| M. avium 104 | MAV_0734 | - | 5e-21 | 31.96% (194) | hypothetical protein MAV_0734 |
| M. thermoresistible (build 8) | TH_3437 | - | 2e-20 | 32.14% (196) | PUTATIVE conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5130 | - | 5e-13 | 29.29% (198) | hypothetical protein Mvan_5130 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0810|M.bovis_AF2122/97 MHRPPWLAQLRRRLRIGVQLGSRVVLEQGRQPRDVYVIGVLVGDQDRGQT
Rv0787|M.tuberculosis_H37Rv MHRPPWLAQLRRRLRIGVQLGSRVVLEQGRQPRDVYVIGVLVGDQDRGQT
MMAR_4900|M.marinum_M --------------------------------------------------
MAV_0734|M.avium_104 --------------------------------------------------
Mflv_1623|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5130|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3437|M.thermoresistible__bu --------------------------------------------------
MSMEG_6455|M.smegmatis_MC2_155 --------------------------------------------------
MAB_4280c|M.abscessus_ATCC_199 --------------------------------------------------
Mb0810|M.bovis_AF2122/97 GDSLEAVRESTGIEEQAGLTELSEEAGMAEMRELHVYDCALMGAFPMRLI
Rv0787|M.tuberculosis_H37Rv GDSLEAVRESTGIEEQAGLTELSEEAGMAEMRELHVYDCALMGAFPMRLI
MMAR_4900|M.marinum_M ------------------------------MRQLHVYDCALMAALPMRLL
MAV_0734|M.avium_104 -----------------------------------------MDKLPMRVF
Mflv_1623|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5130|M.vanbaalenii_PYR-1 --------------------------------------------MFARVV
TH_3437|M.thermoresistible__bu ----------------------------------------------VRML
MSMEG_6455|M.smegmatis_MC2_155 --------------------------------------------------
MAB_4280c|M.abscessus_ATCC_199 --------------------------------------------------
Mb0810|M.bovis_AF2122/97 LATMLVAGRLLATLMAAPSAQAEPETCPPICDQIPATAWISTHAVPLNSQ
Rv0787|M.tuberculosis_H37Rv LATMLVAGRLLATLMAAPSAQAEPETCPPICDQIPATAWISTHAVPLNSQ
MMAR_4900|M.marinum_M LATMLVAGSLVIAVGVATPAAAEPETCPPVCDQIPGAAWIQRRAVPMNAV
MAV_0734|M.avium_104 LATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAV
Mflv_1623|M.gilvum_PYR-GCK ------MWGLMASPGVSD---AAPEICPPACDGIPGSAWIYPGAIPLAPV
Mvan_5130|M.vanbaalenii_PYR-1 LALAVAVSGLVLTPGQAG---GVPGECPPVCNAIPDSAWMVSSSVPLYPV
TH_3437|M.thermoresistible__bu IG-LLSVCGLLVLPVAAGTAGADAGDCPPYCDRIPDSAWIRPSAIPLHDQ
MSMEG_6455|M.smegmatis_MC2_155 --------------------------MAAPPDPIPPNAWAPARSLPMDDT
MAB_4280c|M.abscessus_ATCC_199 ----MRGWLRTISALVVIAGLGAAVPAAAEPKSLPDSVWINPRDIPLDRA
. . :* .* :*:
Mb0810|M.bovis_AF2122/97 YRWPAMAGAAVAVTR-ATP--RFGFEQVCATPAFPHDSRDWAVAGRVTVV
Rv0787|M.tuberculosis_H37Rv YRWPAMAGAAVAVTR-ATP--RFGFEQVCATPAFPHDSRDWAVAGRVTVV
MMAR_4900|M.marinum_M YRWPALGAVATALTR-TTP--RFRFEEICATPAFPDDIRKSAVAGRASVT
MAV_0734|M.avium_104 YHWPALAGQAAHTTG-AAPGPRFRFEELCGAPALPQDPRDSAVVARSTVA
Mflv_1623|M.gilvum_PYR-GCK YRWPDLAGIAVATT---AP--RFAFESWCASPPRDGDPRDYAVAARAEIV
Mvan_5130|M.vanbaalenii_PYR-1 YRWPGLHGVAVTAA---TP--RFEFESWCASPGREADPRDYSVAAQARVT
TH_3437|M.thermoresistible__bu YRWPEPASLATATA---AP---MRFEESCAVPVAGDDPRDHAVAARAVVT
MSMEG_6455|M.smegmatis_MC2_155 QHWPDLASVAEPLDG--RP---FFAEEICGFNPSPKR-QFSSDQARARVD
MAB_4280c|M.abscessus_ATCC_199 SHWAPLSRGAAPVDRP-----AFWSANLCFS--LGESLPQSPESASATVS
:*. * : . * . . :
Mb0810|M.bovis_AF2122/97 HPDGQWQLQAQVLHWRGDTARGGQIAASVFGTAVAALRACQLGAP-----
Rv0787|M.tuberculosis_H37Rv HPDGQWQLQAQVLHWRGDTARGGQIAASVFGTAVAALRACQLGAP-----
MMAR_4900|M.marinum_M HPDGQWQLQAQILHWRGDTARGGAIAATVFGAAVTALRACQLGAP-----
MAV_0734|M.avium_104 HPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRGCQQRAP-----
Mflv_1623|M.gilvum_PYR-GCK NSPGQWSLQVQVVHWRGDTVTGGRDALETLEWARMALSACQLTAP-----
Mvan_5130|M.vanbaalenii_PYR-1 NPAGQWNLHVQVMHWRGDTVTGGPTALQTLEWARMALASCHLTAP-----
TH_3437|M.thermoresistible__bu QPPGDWQLQVQVWHWRGETWRTGETAFGVLRTAVEAVRNCQHTAP-----
MSMEG_6455|M.smegmatis_MC2_155 RGPGRWSLQQQIVHFPGQVASSSERAGALFSSVVDALAKCPAQVPGTVVD
MAB_4280c|M.abscessus_ATCC_199 SDESGWTAVEVVAHWPGEAAVTDQYASTVYRSLRGRLDHCFNAIG---AQ
. * : *: *:. . * : *
Mb0810|M.bovis_AF2122/97 LQSPSVTDDEPTRMAAVIS--GPVIMHTYLVAHVSSSTISELTLWSSGP-
Rv0787|M.tuberculosis_H37Rv LQSPSVTDDEPTRMAAVIS--GPVIMYTYLVAHVSSSTISELTLWSSGP-
MMAR_4900|M.marinum_M KQSPSVTDDEPTRMSAVIS--GPVIMHTYLIAHPASSTISELTLWTSGP-
MAV_0734|M.avium_104 QESPSLTSDEPTRMAAVIS--GPVVMHTYLLAHPASSTISELTLWSSAP-
Mflv_1623|M.gilvum_PYR-GCK SVSPSLTTSEAMQFAAVVSGAG-RVMRTYLVVDPASSTLVEMTLWSATP-
Mvan_5130|M.vanbaalenii_PYR-1 QVSPSLTTSNAMDLAAVISDGGRRVMHTYLLAEPANSSLVELTLWSTLP-
TH_3437|M.thermoresistible__bu GSSATITSDLGTGMAAVISLPGPQVLRQYLLADPRNGTVAELALWASSP-
MSMEG_6455|M.smegmatis_MC2_155 VTTPPVPCAPQRCTQTAATVHAPDRVTAHLYLTAAGGSVSEVAVFAAGT-
MAB_4280c|M.abscessus_ATCC_199 VSVTELTNGHAATVTLPAQGGKQPQYHLYVVQPPGTGTVAELTVTNAITG
. :. :: .:: *::: : .
Mb0810|M.bovis_AF2122/97 -PQVPWP-TVADSAVLDALTAPLCEAYIGSCP
Rv0787|M.tuberculosis_H37Rv -PQVPWP-TVADSAVLDALTAPLCEAYIGSCP
MMAR_4900|M.marinum_M -AQVEWP-VINDSTVLDAMVAPLCEAYIASCS
MAV_0734|M.avium_104 -PQTLWP-AMADDPVLSAMNASLCEAYIASCP
Mflv_1623|M.gilvum_PYR-GCK -PAVPWRGVPADAEVFDAMAVPLCTAYLGSCR
Mvan_5130|M.vanbaalenii_PYR-1 -SAVEWRGVAPDTQVLDAMAAPLCAAYLGSCR
TH_3437|M.thermoresistible__bu -PRVSWS-APPDLQVLAALARPLCTAYIDSCL
MSMEG_6455|M.smegmatis_MC2_155 -PDVPWG-APADDAVLAAITGPVCAVWEC---
MAB_4280c|M.abscessus_ATCC_199 AAGASWV-EADDHQVLRDLAAPICRTAKSTAC
. . * * *: : .:* .