For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RQLHVYDCALMAALPMRLLLATMLVAGSLVIAVGVATPAAAEPETCPPVCDQIPGAAWIQRRAVPMNAVY RWPALGAVATALTRTTPRFRFEEICATPAFPDDIRKSAVAGRASVTHPDGQWQLQAQILHWRGDTARGGA IAATVFGAAVTALRACQLGAPKQSPSVTDDEPTRMSAVISGPVIMHTYLIAHPASSTISELTLWTSGPAQ VEWPVINDSTVLDAMVAPLCEAYIASCS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_4900 | - | - | 100% (239) | hypothetical protein MMAR_4900 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0810 | - | 1e-106 | 74.79% (238) | hypothetical protein Mb0810 |
| M. gilvum PYR-GCK | Mflv_1623 | - | 4e-52 | 51.26% (199) | hypothetical protein Mflv_1623 |
| M. tuberculosis H37Rv | Rv0787 | - | 1e-106 | 74.37% (238) | hypothetical protein Rv0787 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4280c | - | 7e-16 | 25.79% (221) | hypothetical protein MAB_4280c |
| M. avium 104 | MAV_0734 | - | 2e-88 | 66.81% (229) | hypothetical protein MAV_0734 |
| M. smegmatis MC2 155 | MSMEG_6455 | - | 1e-18 | 32.65% (196) | hypothetical protein MSMEG_6455 |
| M. thermoresistible (build 8) | TH_3437 | - | 5e-53 | 47.77% (224) | PUTATIVE conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_0505 | - | 3e-62 | 98.28% (116) | hypothetical protein MUL_0505 |
| M. vanbaalenii PYR-1 | Mvan_5130 | - | 3e-53 | 48.21% (224) | hypothetical protein Mvan_5130 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4900|M.marinum_M --------------------------------------------------
MUL_0505|M.ulcerans_Agy99 --------------------------------------------------
Mb0810|M.bovis_AF2122/97 MHRPPWLAQLRRRLRIGVQLGSRVVLEQGRQPRDVYVIGVLVGDQDRGQT
Rv0787|M.tuberculosis_H37Rv MHRPPWLAQLRRRLRIGVQLGSRVVLEQGRQPRDVYVIGVLVGDQDRGQT
MAV_0734|M.avium_104 --------------------------------------------------
Mflv_1623|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5130|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3437|M.thermoresistible__bu --------------------------------------------------
MSMEG_6455|M.smegmatis_MC2_155 --------------------------------------------------
MAB_4280c|M.abscessus_ATCC_199 --------------------------------------------------
MMAR_4900|M.marinum_M ------------------------------MRQLHVYDCALMAALPMRLL
MUL_0505|M.ulcerans_Agy99 ---------------------------MPKMRQLHVYDCALMAALPMRLL
Mb0810|M.bovis_AF2122/97 GDSLEAVRESTGIEEQAGLTELSEEAGMAEMRELHVYDCALMGAFPMRLI
Rv0787|M.tuberculosis_H37Rv GDSLEAVRESTGIEEQAGLTELSEEAGMAEMRELHVYDCALMGAFPMRLI
MAV_0734|M.avium_104 -----------------------------------------MDKLPMRVF
Mflv_1623|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5130|M.vanbaalenii_PYR-1 --------------------------------------------MFARVV
TH_3437|M.thermoresistible__bu ----------------------------------------------VRML
MSMEG_6455|M.smegmatis_MC2_155 --------------------------------------------------
MAB_4280c|M.abscessus_ATCC_199 --------------------------------------------------
MMAR_4900|M.marinum_M LATMLVAGSLVIAVGVATPAAAEPETCPPVCDQIPGAAWIQRRAVPMNAV
MUL_0505|M.ulcerans_Agy99 LATMLVAGSLVITVGVATPAAAEPETCPPVCDQIPGAAWIQRRAVPMNAV
Mb0810|M.bovis_AF2122/97 LATMLVAGRLLATLMAAPSAQAEPETCPPICDQIPATAWISTHAVPLNSQ
Rv0787|M.tuberculosis_H37Rv LATMLVAGRLLATLMAAPSAQAEPETCPPICDQIPATAWISTHAVPLNSQ
MAV_0734|M.avium_104 LATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAV
Mflv_1623|M.gilvum_PYR-GCK ------MWGLMASPGVSD---AAPEICPPACDGIPGSAWIYPGAIPLAPV
Mvan_5130|M.vanbaalenii_PYR-1 LALAVAVSGLVLTPGQAG---GVPGECPPVCNAIPDSAWMVSSSVPLYPV
TH_3437|M.thermoresistible__bu IGLLSVCG-LLVLPVAAGTAGADAGDCPPYCDRIPDSAWIRPSAIPLHDQ
MSMEG_6455|M.smegmatis_MC2_155 --------------------------MAAPPDPIPPNAWAPARSLPMDDT
MAB_4280c|M.abscessus_ATCC_199 --MRGWLRTISALVVIAGLGAAVPAAAEP--KSLPDSVWINPRDIPLDRA
. :* .* :*:
MMAR_4900|M.marinum_M YRWPALGAVATALTRTTP--RFRFEEICATPAFPDDIRKSAVAGRASVTH
MUL_0505|M.ulcerans_Agy99 YRWPALGAVATALTRTTP--RFRFEEICATPAFPDDIRKSTVAGRASVG-
Mb0810|M.bovis_AF2122/97 YRWPAMAGAAVAVTRATP--RFGFEQVCATPAFPHDSRDWAVAGRVTVVH
Rv0787|M.tuberculosis_H37Rv YRWPAMAGAAVAVTRATP--RFGFEQVCATPAFPHDSRDWAVAGRVTVVH
MAV_0734|M.avium_104 YHWPALAGQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAH
Mflv_1623|M.gilvum_PYR-GCK YRWPDLAGIAVATT--AP--RFAFESWCASPPRDGDPRDYAVAARAEIVN
Mvan_5130|M.vanbaalenii_PYR-1 YRWPGLHGVAVTAA--TP--RFEFESWCASPGREADPRDYSVAAQARVTN
TH_3437|M.thermoresistible__bu YRWPEPASLATATA--AP---MRFEESCAVPVAGDDPRDHAVAARAVVTQ
MSMEG_6455|M.smegmatis_MC2_155 QHWPDLASVAEPLDG-RP---FFAEEICGFNPSPKR-QFSSDQARARVDR
MAB_4280c|M.abscessus_ATCC_199 SHWAPLSRGAAPVDR--P--AFWSANLCFS--LGESLPQSPESASATVSS
:*. * * : . * . . :
MMAR_4900|M.marinum_M PDGQWQLQAQILHWRGDTARGGAIAATVFGAAVTALRACQ--LGAPKQSP
MUL_0505|M.ulcerans_Agy99 --------------------------------------------------
Mb0810|M.bovis_AF2122/97 PDGQWQLQAQVLHWRGDTARGGQIAASVFGTAVAALRACQ--LGAPLQSP
Rv0787|M.tuberculosis_H37Rv PDGQWQLQAQVLHWRGDTARGGQIAASVFGTAVAALRACQ--LGAPLQSP
MAV_0734|M.avium_104 PDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRGCQ--QRAPQESP
Mflv_1623|M.gilvum_PYR-GCK SPGQWSLQVQVVHWRGDTVTGGRDALETLEWARMALSACQ--LTAPSVSP
Mvan_5130|M.vanbaalenii_PYR-1 PAGQWNLHVQVMHWRGDTVTGGPTALQTLEWARMALASCH--LTAPQVSP
TH_3437|M.thermoresistible__bu PPGDWQLQVQVWHWRGETWRTGETAFGVLRTAVEAVRNCQ--HTAPGSSA
MSMEG_6455|M.smegmatis_MC2_155 GPGRWSLQQQIVHFPGQVASSSERAGALFSSVVDALAKCP--AQVPGTVV
MAB_4280c|M.abscessus_ATCC_199 DESGWTAVEVVAHWPGEAAVTDQYASTVYRSLRGRLDHCFNAIGAQVSVT
MMAR_4900|M.marinum_M SVTD-------DEPTRMSAVISGPV--IMHTYLIAHPASSTISELTLWTS
MUL_0505|M.ulcerans_Agy99 --------------------------------------------------
Mb0810|M.bovis_AF2122/97 SVTD-------DEPTRMAAVISGPV--IMHTYLVAHVSSSTISELTLWSS
Rv0787|M.tuberculosis_H37Rv SVTD-------DEPTRMAAVISGPV--IMYTYLVAHVSSSTISELTLWSS
MAV_0734|M.avium_104 SLTS-------DEPTRMAAVISGPV--VMHTYLLAHPASSTISELTLWSS
Mflv_1623|M.gilvum_PYR-GCK SLTT-------SEAMQFAAVVSGAG-RVMRTYLVVDPASSTLVEMTLWSA
Mvan_5130|M.vanbaalenii_PYR-1 SLTT-------SNAMDLAAVISDGGRRVMHTYLLAEPANSSLVELTLWST
TH_3437|M.thermoresistible__bu TITS-------DLGTGMAAVISLPGPQVLRQYLLADPRNGTVAELALWAS
MSMEG_6455|M.smegmatis_MC2_155 DVTTPPVPCAPQRCTQTAATVHAPDRVTAHLYLTAAG--GSVSEVAVFAA
MAB_4280c|M.abscessus_ATCC_199 ELTN-------GHAATVTLPAQGGKQPQYHLYVVQPPGTGTVAELTVTNA
MMAR_4900|M.marinum_M GP--AQVEWP-VINDSTVLDAMVAPLCEAYIASCS
MUL_0505|M.ulcerans_Agy99 -----------------------------------
Mb0810|M.bovis_AF2122/97 GP--PQVPWP-TVADSAVLDALTAPLCEAYIGSCP
Rv0787|M.tuberculosis_H37Rv GP--PQVPWP-TVADSAVLDALTAPLCEAYIGSCP
MAV_0734|M.avium_104 AP--PQTLWP-AMADDPVLSAMNASLCEAYIASCP
Mflv_1623|M.gilvum_PYR-GCK TP--PAVPWRGVPADAEVFDAMAVPLCTAYLGSCR
Mvan_5130|M.vanbaalenii_PYR-1 LP--SAVEWRGVAPDTQVLDAMAAPLCAAYLGSCR
TH_3437|M.thermoresistible__bu SP--PRVSWS-APPDLQVLAALARPLCTAYIDSCL
MSMEG_6455|M.smegmatis_MC2_155 GT--PDVPWG-APADDAVLAAITGPVCAVWEC---
MAB_4280c|M.abscessus_ATCC_199 ITGAAGASWV-EADDHQVLRDLAAPICRTAKSTAC