For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTPLHGARSRVLTRLLSFALTALTLVAASLAGAGAASAHAALISTDPAENTTLTESPQRVSATFNEPMQQ AFAAMTVVGPDGNLWSTDDPQVEGTVVSVGVRPLGPAGTYTVNYRATSADGHVVSGSWSFDLTVAGPGTP GPTVAPAPAPAASEDDGLPVWPFVLAAVVIVGGGAWWALRRRA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_6436 | - | - | 100% (183) | copper resistance protein CopC |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3881 | - | 5e-06 | 48.72% (39) | hypothetical protein Mb3881 |
| M. gilvum PYR-GCK | Mflv_1127 | - | 2e-52 | 60.95% (169) | copper resistance protein CopC |
| M. tuberculosis H37Rv | Rv3851 | - | 5e-06 | 48.72% (39) | hypothetical protein Rv3851 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0109c | - | 4e-42 | 47.31% (186) | copper resistance protein CopC |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_0177 | - | 3e-54 | 64.38% (160) | copper resistance protein CopC |
| M. thermoresistible (build 8) | TH_1515 | - | 8e-54 | 61.31% (168) | copper resistance protein CopC |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5679 | - | 9e-52 | 59.55% (178) | copper resistance protein CopC |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1127|M.gilvum_PYR-GCK -------MTALRRA-----THAFLLVAVMLGLSA-TLVPTGTASAHATRV
Mvan_5679|M.vanbaalenii_PYR-1 -------MTAVQRA-----THVLLVALTTLGLLAGALGYAAAAWAHAARI
MAB_0109c|M.abscessus_ATCC_199 -------MAVLRKS-----VSVFVSAFIAL---TLGLALPAVASAHAVKV
MSMEG_6436|M.smegmatis_MC2_155 -------MTPLHGARSRVLTRLLSFALTALTLVAASLAGAGAASAHAALI
MAV_0177|M.avium_104 -------MRRWAVG------------ACVGALVLIAGLTAPAAWAHAARV
TH_1515|M.thermoresistible__bu MSSTSRAFTRTRVGP------ARILGAFAGILTVMGIVMAPPAAAHATLM
Mb3881|M.bovis_AF2122/97 --------------------------------------MTAIGMSHPPRV
Rv3851|M.tuberculosis_H37Rv --------------------------------------MTAIGMSHPPRV
. . :*. :
Mflv_1127|M.gilvum_PYR-GCK ASDPAENAELARPPARVSATFNEPMQALFAAMTVVGPDG--ALWSDGDVA
Mvan_5679|M.vanbaalenii_PYR-1 AGDPVDNAELAQPPAVVTATFNEPMQAQFAAMTVIGPDG--VQWAEGAPI
MAB_0109c|M.abscessus_ATCC_199 SSDPAENAVLSGPPVQVSATFNEPLQKRFSAMTVIGPDDKTDQWQAGDPV
MSMEG_6436|M.smegmatis_MC2_155 STDPAENTTLTESPQRVSATFNEPMQQAFAAMTVVGPDG--NLWSTDDPQ
MAV_0177|M.avium_104 ATDPAADAALTTGPHRVSATFNEQLQTTFAAMTVVGPDG--NVWSTGEPT
TH_1515|M.thermoresistible__bu STDPADGAVLEEAPERVSATFNEPMQDTFAAMTVVGPDG--NLWSTGEAE
Mb3881|M.bovis_AF2122/97 HRR-------------------------------VGGQR--TALTAGIGL
Rv3851|M.tuberculosis_H37Rv HRR-------------------------------VGGQR--TALTAGIGL
:* : .
Mflv_1127|M.gilvum_PYR-GCK VDGTVIGVALRPGGPAGEYTVNYRATSADGHVVTGSWSFRVLTAAGPAPA
Mvan_5679|M.vanbaalenii_PYR-1 VDGTVISVPVRPGGPAGDYTVNYRATSADGHVVTGAWSYRVLAAGPTPPA
MAB_0109c|M.abscessus_ATCC_199 VSGAVISVGVKAGAPAGKYTVNYRVISEDGHPVDGSWAFTITGSGSSAAA
MSMEG_6436|M.smegmatis_MC2_155 VEGTVVSVGVRPLGPAGTYTVNYRATSADGHVVSGSWSFDLTVAGPGTPG
MAV_0177|M.avium_104 VQGAVVSVAVRPLGPAGTYTANYRVTSADGHVVAGSWSFRLTVPGTGTPG
TH_1515|M.thermoresistible__bu VDGPVVSVAVKPLGPAGTYTANYRATSADGHVVQGSWTFELKVAGSGEPG
Mb3881|M.bovis_AF2122/97 LLAALVLTTIAN--PPAAFAHTAQLSTAT----------------P----
Rv3851|M.tuberculosis_H37Rv LLAALVLTTIAN--PPAAFAHTAQLSTAT----------------P----
: ..:: . : *.. :: . : :
Mflv_1127|M.gilvum_PYR-GCK TAAPVP---------AEADGADG------TDGVPAWPFVAAVTVIVAAGA
Mvan_5679|M.vanbaalenii_PYR-1 ASSATPP-----TTTAAAPAGDAP-----SDGLPVWPFVAAATVIVAAGA
MAB_0109c|M.abscessus_ATCC_199 GAPAISQQPSGTTSSAPVPSANPT-----DGDLPMWPFVVAVVVSVGAAL
MSMEG_6436|M.smegmatis_MC2_155 --PTVAP--------APAPAASE------DDGLPVWPFVLAAVVIVGGGA
MAV_0177|M.avium_104 P-------------AAAGHAGGG------GGAVPVWPFVAAAAALIAGGA
TH_1515|M.thermoresistible__bu PPATLPA------DTADGESDGATDGAATGADLPVWVFVLIAAVIVAGGL
Mb3881|M.bovis_AF2122/97 ---------------APAVAATD------ANDVPTWPFVVGTVAAVAVAA
Rv3851|M.tuberculosis_H37Rv ---------------APAVAATD------ANDVPTWPFVVGTVAAVAVAA
* . :* * ** ... :. .
Mflv_1127|M.gilvum_PYR-GCK LWAVRRRS
Mvan_5679|M.vanbaalenii_PYR-1 LWAVRRRS
MAB_0109c|M.abscessus_ATCC_199 IWTQRRQS
MSMEG_6436|M.smegmatis_MC2_155 WWALRRRA
MAV_0177|M.avium_104 WWAARRGR
TH_1515|M.thermoresistible__bu VWAVRRQQ
Mb3881|M.bovis_AF2122/97 LWAVRRGR
Rv3851|M.tuberculosis_H37Rv LWAVRRGR
*: **