For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AVLRKSVSVFVSAFIALTLGLALPAVASAHAVKVSSDPAENAVLSGPPVQVSATFNEPLQKRFSAMTVIG PDDKTDQWQAGDPVVSGAVISVGVKAGAPAGKYTVNYRVISEDGHPVDGSWAFTITGSGSSAAAGAPAIS QQPSGTTSSAPVPSANPTDGDLPMWPFVVAVVVSVGAALIWTQRRQS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0109c | - | - | 100% (188) | copper resistance protein CopC |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3881 | - | 1e-05 | 37.74% (53) | hypothetical protein Mb3881 |
| M. gilvum PYR-GCK | Mflv_1127 | - | 7e-42 | 48.98% (196) | copper resistance protein CopC |
| M. tuberculosis H37Rv | Rv3851 | - | 2e-05 | 37.74% (53) | hypothetical protein Rv3851 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_5401 | - | 5e-06 | 41.67% (60) | hypothetical protein MMAR_5401 |
| M. avium 104 | MAV_0177 | - | 2e-34 | 44.51% (182) | copper resistance protein CopC |
| M. smegmatis MC2 155 | MSMEG_6436 | - | 5e-42 | 47.31% (186) | copper resistance protein CopC |
| M. thermoresistible (build 8) | TH_1515 | - | 2e-36 | 44.83% (174) | copper resistance protein CopC |
| M. ulcerans Agy99 | MUL_5023 | - | 3e-06 | 41.67% (60) | hypothetical protein MUL_5023 |
| M. vanbaalenii PYR-1 | Mvan_5679 | - | 8e-42 | 47.12% (191) | copper resistance protein CopC |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_0177|M.avium_104 -------MRRWAVG------ACVGALVLIAGLTAP-AAWAHAARVATDPA
TH_1515|M.thermoresistible__bu MSSTSRAFTRTRVGPARILGAFAGILTVMGIVMAP-PAAAHATLMSTDPA
MSMEG_6436|M.smegmatis_MC2_155 --MTPLHGARSRVLTRLLSFALTALTLVAASLAGAGAASAHAALISTDPA
Mflv_1127|M.gilvum_PYR-GCK -------MTALRRATHAFLLVAVMLGLSA-TLVPTGTASAHATRVASDPA
Mvan_5679|M.vanbaalenii_PYR-1 -------MTAVQRATHVLLVALTTLGLLAGALGYAAAAWAHAARIAGDPV
MAB_0109c|M.abscessus_ATCC_199 -------MAVLRKSVSVFVSAFIAL---TLGLALPAVASAHAVKVSSDPA
Mb3881|M.bovis_AF2122/97 --------------------------------------------------
Rv3851|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_5401|M.marinum_M --------------------------------------------------
MUL_5023|M.ulcerans_Agy99 --------------------------------------------------
MAV_0177|M.avium_104 ADAALTTGPHRVSATFNEQLQTTFAAMTVVGPDG--NVWSTGEPTVQGAV
TH_1515|M.thermoresistible__bu DGAVLEEAPERVSATFNEPMQDTFAAMTVVGPDG--NLWSTGEAEVDGPV
MSMEG_6436|M.smegmatis_MC2_155 ENTTLTESPQRVSATFNEPMQQAFAAMTVVGPDG--NLWSTDDPQVEGTV
Mflv_1127|M.gilvum_PYR-GCK ENAELARPPARVSATFNEPMQALFAAMTVVGPDG--ALWSDGDVAVDGTV
Mvan_5679|M.vanbaalenii_PYR-1 DNAELAQPPAVVTATFNEPMQAQFAAMTVIGPDG--VQWAEGAPIVDGTV
MAB_0109c|M.abscessus_ATCC_199 ENAVLSGPPVQVSATFNEPLQKRFSAMTVIGPDDKTDQWQAGDPVVSGAV
Mb3881|M.bovis_AF2122/97 -----------------------------MTAIG-----MSHPPRVHRRV
Rv3851|M.tuberculosis_H37Rv -----------------------------MTAIG-----MSHPPRVHRRV
MMAR_5401|M.marinum_M -----------------MPVLRSWVSSSRVQSRA-----RYSRGVVAQVL
MUL_5023|M.ulcerans_Agy99 --------------------------------------------MVAQVL
* :
MAV_0177|M.avium_104 VSVAVRPLGPAGTYTANYRVTSADGHVVAGSWSFRLTVPGT----GTPGP
TH_1515|M.thermoresistible__bu VSVAVKPLGPAGTYTANYRATSADGHVVQGSWTFELKVAGS----GEPGP
MSMEG_6436|M.smegmatis_MC2_155 VSVGVRPLGPAGTYTVNYRATSADGHVVSGSWSFDLTVAGP----GTPGP
Mflv_1127|M.gilvum_PYR-GCK IGVALRPGGPAGEYTVNYRATSADGHVVTGSWSFRVLTAAG----PAPAT
Mvan_5679|M.vanbaalenii_PYR-1 ISVPVRPGGPAGDYTVNYRATSADGHVVTGAWSYRVLAAGP----TPPAA
MAB_0109c|M.abscessus_ATCC_199 ISVGVKAGAPAGKYTVNYRVISEDGHPVDGSWAFTITGSGSSAAAGAPAI
Mb3881|M.bovis_AF2122/97 GGQRTALTAGIGLLLAALVLTTIANPPAAFAHTAQLSTATP---------
Rv3851|M.tuberculosis_H37Rv GGQRTALTAGIGLLLAALVLTTIANPPAAFAHTAQLSTATP---------
MMAR_5401|M.marinum_M GKLRFAPLLVAITIVVALPVPAASAQAGGMAAHESVTVGAS---------
MUL_5023|M.ulcerans_Agy99 GKLRFAPLLVAITIVVALPVPAASAQAGGMAAHESVTVGAS---------
. : : :
MAV_0177|M.avium_104 -------AAAGHAGGG------GGAVPVWPFVAAAAALIAGGAWWAARRG
TH_1515|M.thermoresistible__bu PATLPADTADGESDGATDGAATGADLPVWVFVLIAAVIVAGGLVWAVRRQ
MSMEG_6436|M.smegmatis_MC2_155 ------TVAPAPAPAASE----DDGLPVWPFVLAAVVIVGGGAWWALRRR
Mflv_1127|M.gilvum_PYR-GCK AAPVP----AEADGADG-----TDGVPAWPFVAAVTVIVAAGALWAVRRR
Mvan_5679|M.vanbaalenii_PYR-1 SSATPPTTTAAAPAGDAP----SDGLPVWPFVAAATVIVAAGALWAVRRR
MAB_0109c|M.abscessus_ATCC_199 SQQPSGTTSSAPVPSANP---TDGDLPMWPFVVAVVVSVGAALIWTQRRQ
Mb3881|M.bovis_AF2122/97 ---------APAVAATDA-----NDVPTWPFVVGTVAAVAVAALWAVRRG
Rv3851|M.tuberculosis_H37Rv ---------APAVAATDA-----NDVPTWPFVVGTVAAVAVAALWAVRRG
MMAR_5401|M.marinum_M ---------GDG-GGDSG-----EDLPAWPFAVGVVAAVGAAALWATRRR
MUL_5023|M.ulcerans_Agy99 ---------GDG-GGDSG-----EDLPAWPFAVGVVAAVGAAALWATRRR
. :* * *. ... :. . *: **
MAV_0177|M.avium_104 R
TH_1515|M.thermoresistible__bu Q
MSMEG_6436|M.smegmatis_MC2_155 A
Mflv_1127|M.gilvum_PYR-GCK S
Mvan_5679|M.vanbaalenii_PYR-1 S
MAB_0109c|M.abscessus_ATCC_199 S
Mb3881|M.bovis_AF2122/97 R
Rv3851|M.tuberculosis_H37Rv R
MMAR_5401|M.marinum_M P
MUL_5023|M.ulcerans_Agy99 P