For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNQPTGLVAILRGVRPDEILAIGGALIDAGFTAIEIPLNSPDPFDSIERLAAAAPEGCVIGAGTVLTVDD VVRAESAGARIMVSPNANPEVIAVATRRGMRAYPGVATPTEAFSAVDAGARNLKLFPSDAVGISGMKAWR AVLPADIEMLPVGGVDENNLADWIAAGADGAGLGTNLYRPGDDADAVARRARTLQDIWSDAYAERNPR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6176 | - | - | 100% (208) | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
M. smegmatis MC2 155 | MSMEG_3788 | eda | 1e-21 | 35.42% (192) | 2-dehydro-3-deoxyphosphogluconate |
M. smegmatis MC2 155 | MSMEG_0312 | eda | 1e-19 | 33.70% (184) | 2-dehydro-3-deoxyphosphogluconate |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4889 | - | 1e-14 | 30.51% (177) | 2-dehydro-3-deoxyphosphogluconate |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6176|M.smegmatis_MC2_155 ---MNQP------TGLVAILRGVRPDEILAIGGALIDAGFTAIEIPLNSP Mvan_4889|M.vanbaalenii_PYR-1 MEDVKEPRSLLDVAPVMPVISVRRAADAVPVARAITAAGLPLVQVALDGP :::* : ::.:: *. : :.:. *: **:. :::.*:.* MSMEG_6176|M.smegmatis_MC2_155 DPFDSIERLAAAAPEGCVIGAGTVLTVDDVVRAESAGARIMVSPNANPEV Mvan_4889|M.vanbaalenii_PYR-1 TALEAIARIAEEAPD-VIVGAGAVTEADQPERARAAGAEFLIATTGGAAL .:::* *:* **: ::***:* .*: **.:***.::::..... : MSMEG_6176|M.smegmatis_MC2_155 IAVATRRGMRAYPGVATPTEAFSAVDAGARNLKLFPSDAVG-ISGMKAWR Mvan_4889|M.vanbaalenii_PYR-1 CAAMRDSELPHLPGVTTAAEAAGLLDAGYTDLVLHPAAAAGGLRHLKALA *. : ***:*.:** . :*** :* *.*: *.* : :** MSMEG_6176|M.smegmatis_MC2_155 AVLPADIEMLPVGGVDENNLADWIAAGADGAGLGTNLYRPGD-----DAD Mvan_4889|M.vanbaalenii_PYR-1 AFAPA-ARFCASGGITAADLTGYLAAPNVGC-VSADWLAPADAVRRRDWD *. ** .: . **: :*:.::** *. :.:: *.* * * MSMEG_6176|M.smegmatis_MC2_155 AVARRARTLQDIWSDAYAERNPR Mvan_4889|M.vanbaalenii_PYR-1 RIRRLADVALKLSTPTVTTVRAL : * * . .: : : : ..