For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_6077 (-)

annotation: transcriptional regulator, CarD family protein
coordinates: 6141027 - 6141515
length: 162

IFKVGDTVVYPHHGAALIEAIETRTIKGEQKEYLVLKVAQGDLTVRVPADNAEYVGVRDVVGQEGLDKVF
QVLRAPHTEEPTNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELAL
AENTDDAKAETILDEVLAAAS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6077--100% (162)transcriptional regulator, CarD family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3614c-5e-8798.15% (162) putative transcription factor
M. gilvum PYR-GCKMflv_1444-2e-8799.38% (162) CarD family transcriptional regulator
M. tuberculosis H37RvRv3583c-5e-8798.15% (162) transcription factor
M. leprae Br4923MLBr_00320-1e-8595.68% (162) putative transcription factor
M. abscessus ATCC 19977MAB_0568-2e-8293.83% (162) putative CarD-like transcriptional regulator
M. marinum MMMAR_5083-7e-8798.15% (162) transcriptional regulatory protein
M. avium 104MAV_0570-5e-8798.15% (162) transcriptional regulator, CarD family protein
M. thermoresistible (build 8)TH_1183-6e-7799.31% (145) POSSIBLE TRANSCRIPTION FACTOR
M. ulcerans Agy99MUL_4159-5e-8798.15% (162) transcriptional regulatory protein
M. vanbaalenii PYR-1Mvan_5340-4e-8798.77% (162) CarD family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1444|M.gilvum_PYR-GCK          ---MIFKVGDTVVYPHHGAALIEAIETRTIKGEQKEYLVLKVAQGDLTVR
Mvan_5340|M.vanbaalenii_PYR-1       ---MIFKVGDTVVYPHHGAALIEAIETRTIKGEQKEYLVLKVSQGDLTVR
MSMEG_6077|M.smegmatis_MC2_155      ---MIFKVGDTVVYPHHGAALIEAIETRTIKGEQKEYLVLKVAQGDLTVR
MAV_0570|M.avium_104                ---MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVR
MUL_4159|M.ulcerans_Agy99           ---MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVR
MMAR_5083|M.marinum_M               ---MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVR
Rv3583c|M.tuberculosis_H37Rv        ---MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVR
Mb3614c|M.bovis_AF2122/97           ---MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVR
MLBr_00320|M.leprae_Br4923          MNLMIFKVGDTVVYPHHGAALVEAIETRTINGEQKEYLVLKVAQGDLTVR
TH_1183|M.thermoresistible__bu      --------------------LIEAIETRTIKGEQKEYLVLKVAQGDLTVR
MAB_0568|M.abscessus_ATCC_1997      ---MIFKVGDTVVYPHHGAALIEAIETRTIKGEQKEYLVLKVAQGDLTVR
                                                        *:********:***********:*******

Mflv_1444|M.gilvum_PYR-GCK          VPADNAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
Mvan_5340|M.vanbaalenii_PYR-1       VPADNAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
MSMEG_6077|M.smegmatis_MC2_155      VPADNAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
MAV_0570|M.avium_104                VPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
MUL_4159|M.ulcerans_Agy99           VPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
MMAR_5083|M.marinum_M               VPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
Rv3583c|M.tuberculosis_H37Rv        VPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
Mb3614c|M.bovis_AF2122/97           VPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
MLBr_00320|M.leprae_Br4923          VPAENAEYVGVRDVVGQEGLDQVFQVLRAPHTEEPTNWSRRYKANLEKLA
TH_1183|M.thermoresistible__bu      VPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLA
MAB_0568|M.abscessus_ATCC_1997      VPAENAEYVGVRDVVGREGLDTVFQVLRAPHTEEPTNWSRRFKANQEKLA
                                    ***:************:**** *******************:*** ****

Mflv_1444|M.gilvum_PYR-GCK          SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAENTDD
Mvan_5340|M.vanbaalenii_PYR-1       SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAENTDD
MSMEG_6077|M.smegmatis_MC2_155      SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAENTDD
MAV_0570|M.avium_104                SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDD
MUL_4159|M.ulcerans_Agy99           SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDD
MMAR_5083|M.marinum_M               SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDD
Rv3583c|M.tuberculosis_H37Rv        SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDD
Mb3614c|M.bovis_AF2122/97           SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDD
MLBr_00320|M.leprae_Br4923          SGDVNKVSEVVRDLWRRDQDRGLSAGEKRMLAKARQILVGELALAESTDD
TH_1183|M.thermoresistible__bu      SGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAENTDD
MAB_0568|M.abscessus_ATCC_1997      SGDVKKVAEVVRDLWRREQERGLSAGEKRMLAKARQILVGELALAENTNA
                                    ****:**:*********:*:**************************.*: 

Mflv_1444|M.gilvum_PYR-GCK          AKASTILDEVLAAAS
Mvan_5340|M.vanbaalenii_PYR-1       AKASTILDEVLAAAS
MSMEG_6077|M.smegmatis_MC2_155      AKAETILDEVLAAAS
MAV_0570|M.avium_104                AKAETILDEVLAAAS
MUL_4159|M.ulcerans_Agy99           AKAETILDEVLAAAS
MMAR_5083|M.marinum_M               AKAETILDEVLAAAS
Rv3583c|M.tuberculosis_H37Rv        AKAETILDEVLAAAS
Mb3614c|M.bovis_AF2122/97           AKAETILDEVLAAAS
MLBr_00320|M.leprae_Br4923          AKAETILDEVLAAAS
TH_1183|M.thermoresistible__bu      AKAETILDEVLAAAS
MAB_0568|M.abscessus_ATCC_1997      AKADTILDEVLAAAS
                                    ***.***********