For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLVAGQDDARGTGRAVVEELLKAPGTLLVSHTFDGHVVVRTVSSSVDSSQWVLELVHGCVSCTVRDDLLI LLRRLHRRADVTRIVVQMMPWLEPEPVRWAIDNVHVRVGPGYIDGPAARDVEVAAVVTCVDTAAWLEQAL GEDELADGRTAAQVVVGQAEVADVLVLGEPEATTLAVLRRLAPRARITVGPDRLELALAHLEPDTPRGRA LSPRDSLLAGQPPLTADGEVRIVEFTARRPFHPVRLHAAIDLLLDGVVRTRGRAWLANRDAEVMWIESAG GGLRVSTAGKWLAAMNSSELAYTDPQWRALAAIDWDPSFGDRHVSLVMLVCGARTDDILDALRGALLTDA EFARRQEWRHYPDPFGDWHQEPCDADQAAHAAQFSDARHHPDPQTGEQS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6069 | - | - | 100% (399) | CobW/P47K domain-containing protein |
M. smegmatis MC2 155 | MSMEG_6048 | - | 3e-25 | 30.52% (344) | cobalamin synthesis protein/P47K |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0109 | - | 1e-134 | 62.09% (393) | hypothetical protein Mb0109 |
M. gilvum PYR-GCK | Mflv_1313 | - | 1e-107 | 56.12% (376) | cobalamin synthesis CobW domain-containing protein |
M. tuberculosis H37Rv | Rv0106 | - | 1e-134 | 62.09% (393) | hypothetical protein Rv0106 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0335 | - | 1e-138 | 62.20% (381) | cobalamin synthesis protein |
M. marinum M | MMAR_0293 | - | 1e-133 | 61.44% (389) | hypothetical protein MMAR_0293 |
M. avium 104 | MAV_4874 | - | 1e-130 | 62.04% (382) | CobW/P47K domain-containing protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4830 | - | 1e-132 | 61.18% (389) | hypothetical protein MUL_4830 |
M. vanbaalenii PYR-1 | Mvan_5332 | - | 1e-119 | 55.42% (397) | cobalamin synthesis CobW domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0109|M.bovis_AF2122/97 -MRTPVILVAGQDHTD----EVTGALLRRTGTVVVEHRFDGHVVRRMTAT Rv0106|M.tuberculosis_H37Rv -MRTPVILVAGQDHTD----EVTGALLRRTGTVVVEHRFDGHVVRRMTAT MMAR_0293|M.marinum_M -MRTPVVLVAGQGDTD----DVTGLLLRRPGTVVVEHRFDGHVVRRNIIT MUL_4830|M.ulcerans_Agy99 -MRTPVVLVAGQGDTD----DVTGLLLRRPGTVVVEHRFDGHVVRRNIIT MAB_0335|M.abscessus_ATCC_1997 -MRTPVLLVSGQTDTD----AVTQVLARDPGTVVVTHRFDGHIVMRSVAG MAV_4874|M.avium_104 ----------------------MGALLRTSGTLVVEHRFDGHVVRRTTAV Mvan_5332|M.vanbaalenii_PYR-1 MNRTPVLLVSGQELTD----QISEALLHKSGTLVVRHRFDGQVVLRSVCI MSMEG_6069|M.smegmatis_MC2_155 ------MLVAGQDDARGTGRAVVEELLKAPGTLLVSHTFDGHVVVRTVSS Mflv_1313|M.gilvum_PYR-GCK -MRTPVVVVTGQSDTG----DIGDLLLADGATALVEHHVEGHVVHRTTTV * .* :* * .:*::* * Mb0109|M.bovis_AF2122/97 LSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAP Rv0106|M.tuberculosis_H37Rv LSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAP MMAR_0293|M.marinum_M FRRGELSTAEEVLELAHGCVSCTIRNDLLILLRRLHRRDGVDRIVVHLAP MUL_4830|M.ulcerans_Agy99 FRRGELSTAEEALELAHGCVSCTIRNDLLILLRRLHRRDGVDRIVVHLAP MAB_0335|M.abscessus_ATCC_1997 IRG----VTETVLELAHGCVSCTIRDDLLVLLRKLHRRDDVGRIVLHLEP MAV_4874|M.avium_104 LTDGVLTSTECGLELAHGCVSCTIRNDLLVLLRQLHRRDDVDRIVVHLAP Mvan_5332|M.vanbaalenii_PYR-1 RRGDEPHTSQWPIELMNCCVDCTIRSDLLVLLRRLHRRDDVSRIVVHLPP MSMEG_6069|M.smegmatis_MC2_155 SVD----SSQWVLELVHGCVSCTVRDDLLILLRRLHRRADVTRIVVQMMP Mflv_1313|M.gilvum_PYR-GCK LRRGVVVKAVSVVEMTNGCPSCAVREDLVDHLCRLHLRPDVARIAVLLSP : :*: : * .*::*.**: * :** * .* **.: : * Mb0109|M.bovis_AF2122/97 WLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSL Rv0106|M.tuberculosis_H37Rv WLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSL MMAR_0293|M.marinum_M WLEPEPICWAINHVRVRVGPGYPDAPAGRDVRIGAVVTCVDSANWLAQSL MUL_4830|M.ulcerans_Agy99 WLEPEPICWAINHVRVRVGPGYPDAPAGRDVRIGAVVTCVDSANWLAQSL MAB_0335|M.abscessus_ATCC_1997 WLEADPICWAINTVPVRVGPGFVDGPAARDVQIAGVVSCVDSANWLEQAL MAV_4874|M.avium_104 WLEPEPICLAINHVRVRVAPGGVDGPAALDVSIAAVVTCVDSSTWLSQAL Mvan_5332|M.vanbaalenii_PYR-1 WLEPEPLCWDINNVDVVVGPGYIDGPAARDVRIEAVITTVATGQWLTDAL MSMEG_6069|M.smegmatis_MC2_155 WLEPEPVRWAIDNVHVRVGPGYIDGPAARDVEVAAVVTCVDTAAWLEQAL Mflv_1313|M.gilvum_PYR-GCK WMEPEPVCVALTRS-----------TAARHVAVSAVVATVDTSVWLHQAL *:*.:*: : .*. .* : .*:: * ** ::* Mb0109|M.bovis_AF2122/97 GEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGG Rv0106|M.tuberculosis_H37Rv GEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGG MMAR_0293|M.marinum_M GDEELADGRTFAQVTVGQAEFADVLVLNRPDPVTLAVLPRLAPRARITVG MUL_4830|M.ulcerans_Agy99 GDEELADGRTFAQVTVGQAEFADVLVLNRPDPVTLAVLPRLAPRARITVG MAB_0335|M.abscessus_ATCC_1997 GDDELADGRTVAQVVIGQAEFADVLLVRNPEPEVLSVLRRLAPRARITAR MAV_4874|M.avium_104 GEDELDDGRTHAQVVIGQAEFADVVVLDHPNPFLAAVLRRLAPRARVRVG Mvan_5332|M.vanbaalenii_PYR-1 GADVLDDGRTVAQVVVGQAEFADVLLLSAPDRTTQAVLHRLAPRAQIITG MSMEG_6069|M.smegmatis_MC2_155 GEDELADGRTAAQVVVGQAEVADVLVLGEPEATTLAVLRRLAPRARITVG Mflv_1313|M.gilvum_PYR-GCK GDDELDDGRTVAQVVVGQVEFADVVVLTEAHRDTLAVVRRLAPAARITVG * : * **** ***.:**.*.**:::: .. :*: **** *:: Mb0109|M.bovis_AF2122/97 VDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRP Rv0106|M.tuberculosis_H37Rv VDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRP MMAR_0293|M.marinum_M LDRVELALANLDDYSRRGRSDHPHASLLGGRPPLGTDGGVGIVEFNARRP MUL_4830|M.ulcerans_Agy99 LDRVELALANLDDYSRRGRSDHPHASLLGGRPPLGTDGGVGIVEFNARRP MAB_0335|M.abscessus_ATCC_1997 VGRVEQALDHLEEDARCGRADNPHGALLAGQPSLAADGRVELVEFNARRP MAV_4874|M.avium_104 ADGIDDALNNLYRDARRGRVDDPHGPLLAGQPPLDARGPIRLVEFNSRRP Mvan_5332|M.vanbaalenii_PYR-1 TEQLGSALDALSDSARRGADHDPHEPLLSGEPPLVAEHGVKLVEFQAIRP MSMEG_6069|M.smegmatis_MC2_155 PDRLELALAHLEPDTPRGRALSPRDSLLAGQPPLTADGEVRIVEFTARRP Mflv_1313|M.gilvum_PYR-GCK VSRFTLALANLDADARRGRGNDPHGSLLAGQPPLEPAGRVRLVEFAARRP . ** * : * *: .**.* *.* . : :*** : ** Mb0109|M.bovis_AF2122/97 FHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGK Rv0106|M.tuberculosis_H37Rv FHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGK MMAR_0293|M.marinum_M FRPERLHDAVDHLLDGVIRTRGRLWLANRPDQVMWLESAGGGLRVASAGK MUL_4830|M.ulcerans_Agy99 FRPERLHDAVDHLLDGVIRTRGRLWLANRPDQVMWLESAGGGLRVAWAGK MAB_0335|M.abscessus_ATCC_1997 FHPLRLHAAIDMLLDGVIRTRGRLWLATQGEQAMWLESAGGGLRVSAAGK MAV_4874|M.avium_104 FHPGRLHACLDLLLDGVIRTRGRLWLASRADRAMWLESAGAGLRVSSAGK Mvan_5332|M.vanbaalenii_PYR-1 FHPLRLHRAIDDLLDGVVRLRGRAWLASQPDVVLWIESAGGGLRVGHAGE MSMEG_6069|M.smegmatis_MC2_155 FHPVRLHAAIDLLLDGVVRTRGRAWLANRDAEVMWIESAGGGLRVSTAGK Mflv_1313|M.gilvum_PYR-GCK FHPSRLHAAVDLLLEGVVRSRGRLWLAHLPDMAVGLDSAGGGLLVTRAGK *:* *** .:* **:**:* *** *** .: ::***.** * **: Mb0109|M.bovis_AF2122/97 WLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVN Rv0106|M.tuberculosis_H37Rv WLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVN MMAR_0293|M.marinum_M WLAAMSPAEVDHADPERRLFAELMWEYRFGDRHTAMTVLACGADRAEITR MUL_4830|M.ulcerans_Agy99 WLAAMSPAEVDHADPERRLFAEMMWEYRFGDRHTAMTVLACGADRAEITR MAB_0335|M.abscessus_ATCC_1997 WLAAMDSVEVQRVDPERRAFADLMWDYQFGDRHNAMTVLVCGADSREVLD MAV_4874|M.avium_104 WLAAMTGPERDGIDAQRRVLAALGWDDRHGDRHTAMAILVCGADPAEILD Mvan_5332|M.vanbaalenii_PYR-1 WLAASAIDEPADPDPERAVLASLRWDEQFGDRHISLTALICGADPEAVTA MSMEG_6069|M.smegmatis_MC2_155 WLAAMNSSELAYTDPQWRALAAIDWDPSFGDRHVSLVMLVCGARTDDILD Mflv_1313|M.gilvum_PYR-GCK WLAAMTSRELAYVGAERRAMADMMWDDRYGDRHTSMTVLVCGADPAEIVS **** * . : :* : * .**** ::. * *** : Mb0109|M.bovis_AF2122/97 ALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAG--EFSAHRN Rv0106|M.tuberculosis_H37Rv ALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAG--EFSAHRN MMAR_0293|M.marinum_M VLTGALLTDREMARPQDWPAYDDPFGDWHEDPCHETPDESG--QFSGHLN MUL_4830|M.ulcerans_Agy99 VLTGALLTDREMARPQDWPAYDDPFGDWHEDPCHETPDESG--QFSGHLN MAB_0335|M.abscessus_ATCC_1997 ALRGALLTDDEMASPADWDEFDDPFGDWHEDPCEHLSEAEAFLAYGDHNT MAV_4874|M.avium_104 ALQAALLTDEELERPGEWQGYDDPFGDWHEEPCVGLEAADN--AAQGARQ Mvan_5332|M.vanbaalenii_PYR-1 SLSAALLTDDELSRPDLWAHWEDPFGEWHEDPCEGLDKADG-AATRDRPD MSMEG_6069|M.smegmatis_MC2_155 ALRGALLTDAEFARRQEWRHYPDPFGDWHQEPCDADQAAHA-AQFSDARH Mflv_1313|M.gilvum_PYR-GCK ALRGALLTDAEMGRPQDWPRFDDPFGDWHPQEARLA-------------- * .***:* *: * : ****:** : . Mb0109|M.bovis_AF2122/97 SGESR----- Rv0106|M.tuberculosis_H37Rv SGESR----- MMAR_0293|M.marinum_M KGELE----- MUL_4830|M.ulcerans_Agy99 KGELE----- MAB_0335|M.abscessus_ATCC_1997 EGNH------ MAV_4874|M.avium_104 DPDPS----- Mvan_5332|M.vanbaalenii_PYR-1 EGDPTGFSRS MSMEG_6069|M.smegmatis_MC2_155 HPDPQTGEQS Mflv_1313|M.gilvum_PYR-GCK ----------