For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTAPRASAAPGQWPVERANAWYQAQGWLVGTNFITSNAINQLEMFSAGTYDPRRIDSELGACRLLGFNTV RVFLHDLLWAQDRAGFQNRLAQFVSIASRQGIKPLFVLFDSCWDPLPKPGAQRAPTPGVHNSGWVQSPGA QRIDDPRYRPVLRDYVVGVMSQFRNDQRVLGWDLWNEPDNPARQYRKVERSDKLDAVGALLPQVFGWARS VNAAQPLTSGVWQGSWERGRRSEMASFQLDNSDVISFHSYAGPDEFEARIAELEPLGRPILCTEYLARSE GSTLEGVLPVAKRHNVGAYSWGLVAGKTQTYFPWDSWDKPYTKVPNVWFHDLLRPDGRPYKDSEYATLRK LTARV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5877 | - | - | 100% (356) | hypothetical protein MSMEG_5877 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3123 | - | 1e-162 | 74.93% (351) | hypothetical protein Mb3123 |
M. gilvum PYR-GCK | Mflv_1032 | - | 1e-146 | 67.42% (356) | hypothetical protein Mflv_1032 |
M. tuberculosis H37Rv | Rv3096 | - | 1e-162 | 74.93% (351) | hypothetical protein Rv3096 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1554 | - | 1e-160 | 73.14% (350) | hypothetical protein MMAR_1554 |
M. avium 104 | MAV_0332 | - | 1e-153 | 71.19% (354) | hypothetical protein MAV_0332 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3476 | - | 1e-160 | 73.14% (350) | hypothetical protein MUL_3476 |
M. vanbaalenii PYR-1 | Mvan_5801 | - | 1e-147 | 67.42% (356) | hypothetical protein Mvan_5801 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3123|M.bovis_AF2122/97 ------MHRRTALKLPLLLAAGTVLGQAPRAAAGEPGRWSADRAHRWYQA Rv3096|M.tuberculosis_H37Rv ------MHRRTALKLPLLLAAGTVLGQAPRAAAEEPGRWSADRAHRWYQA MMAR_1554|M.marinum_M ------MQRRTALKLPLLLAAGAALAQPPRATA-VAGRWSAERANTWYQT MUL_3476|M.ulcerans_Agy99 -----MVQRRTALKLPLLLAAGAALAQTPRATA-VAGRWSAERANTWYQT MAV_0332|M.avium_104 ------MERRTALKLPLLLAAGAAVARAPRASAEEAGRWSPERANRWYQA MSMEG_5877|M.smegmatis_MC2_155 ------------------------MTTAPRASA-APGQWPVERANAWYQA Mflv_1032|M.gilvum_PYR-GCK MSPNAEVGRRAVLKVPVVVGAGLAISRTPRASA-ETARWSPERAHRWHRA Mvan_5801|M.vanbaalenii_PYR-1 MPPEPLLNRRAALKVPAVLAAGMALSTVPRASA-ELTRWSPDRAHRWHRA : ***:* :*. :**: *::: Mb3123|M.bovis_AF2122/97 HGWLVGANYITSNAINQLEMFQPGTYDPRRIDNELGLARFHGFNTVRVFL Rv3096|M.tuberculosis_H37Rv HGWLVGANYITSNAINQLEMFQPGTYDPRRIDNELGLARFHGFNTVRVFL MMAR_1554|M.marinum_M QGWIVGANYITANAINQLEMFQPATYDPRRIDRELGLARLIGFNSMRVFL MUL_3476|M.ulcerans_Agy99 QGWIVGANYITANAINQLEMFQPATYDPRRIDRELGLARLIGFNSMRVFL MAV_0332|M.avium_104 QGWLVGANYIPANAINQLEMFQPDTFDPRRIDTELGWAQFYGHNTARVFL MSMEG_5877|M.smegmatis_MC2_155 QGWLVGTNFITSNAINQLEMFSAGTYDPRRIDSELGACRLLGFNTVRVFL Mflv_1032|M.gilvum_PYR-GCK QGWLVGANFIPANAINQLEMFQPGTFDPRRIDTELRMAKHLGLNTVRVFL Mvan_5801|M.vanbaalenii_PYR-1 QGWLVGANFIPATAINQLEMFQPGTFDPRRIDSELRTAKLIGLNTVRVFL :**:**:*:*.:.********.. *:****** ** .: * *: **** Mb3123|M.bovis_AF2122/97 HDLLWAQDAPGFQTRLAQFVAIAARYHIKPLFVLFDSCWDPLPRPGRQRA Rv3096|M.tuberculosis_H37Rv HDLLWAQDAPGFQTRLAQFVAIAARYHIKPLFVLFDSCWDPLPRPGRQRA MMAR_1554|M.marinum_M HDQLWASDQRGFQTRLAQFVAIAARHGIKPLFVLFDSCWDPFPKLGQQRA MUL_3476|M.ulcerans_Agy99 HDQLWASDQRGFQTRLAQFVAIAARHGIKPLFVLFDSCWDPFPKLGQQRA MAV_0332|M.avium_104 HDQLWAADQRGFQTRLGQFVDIAARHRIKPLFVFFDSCWDPQPRAGRQRP MSMEG_5877|M.smegmatis_MC2_155 HDLLWAQDRAGFQNRLAQFVSIASRQGIKPLFVLFDSCWDPLPKPGAQRA Mflv_1032|M.gilvum_PYR-GCK HDLLWVQDRAGFQRRLARFVDIAAHHRIKPLFVLFDSCWDPHPRLGTQRG Mvan_5801|M.vanbaalenii_PYR-1 HDLLWVQDRVGFQRRLARFVDIAAHHGIKPLFVLFDSCWDPHPRLGKQRD ** **. * *** **.:** **:: ******:******* *: * ** Mb3123|M.bovis_AF2122/97 PRAGVHNSGWVQSPGAERLDDRRYASTLYNYVTGVLGQFRNDDRVLGWDL Rv3096|M.tuberculosis_H37Rv PRAGVHNSGWVQSPGAERLDDRRYASTLYNYVTGVLGQFRNDDRVLGWDL MMAR_1554|M.marinum_M PRPGVHNSGWVQSPGAEHLGDPSYQAVLHGYVTGVLNQFRNDNRVLGWDL MUL_3476|M.ulcerans_Agy99 PTPGVHNSGWVQSPGAEHLGDPSYQAVLHGYVTGVLNQFRNDNRVLGWDL MAV_0332|M.avium_104 PRPGVHNSGWVQSPGAERLGDPRYIPVMRDYVTSVMTQFRNDDRVLGWDL MSMEG_5877|M.smegmatis_MC2_155 PTPGVHNSGWVQSPGAQRIDDPRYRPVLRDYVVGVMSQFRNDQRVLGWDL Mflv_1032|M.gilvum_PYR-GCK PVPGVHNSGWVQSPGAEHLGDPAYRRVLRDYVIGVISQFRHDKRVLGWDL Mvan_5801|M.vanbaalenii_PYR-1 PIPGVHNSGWVQSPGAEHLSDPRHRRVLRDYVVGVLSQFRHDKRVLGWDL * .*************:::.* : .: .** .*: ***:*.******* Mb3123|M.bovis_AF2122/97 WNEPDNPARVYRKVERKDKLERVAELLPQVFRWARTVDPVQPLTSGVWQG Rv3096|M.tuberculosis_H37Rv WNEPDNPARVYRKVERKDKLERVAELLPQVFRWARTVDPVQPLTSGVWQG MMAR_1554|M.marinum_M WNEPDNPAKVYRKVERKDKLERVAELLPQVFQWAREVDPSQPLTSGVWQG MUL_3476|M.ulcerans_Agy99 WNEPDNPAKVYRKVERKDKLERVAELLPQVFQWAREVDPSQPLTSGVWQG MAV_0332|M.avium_104 WNEPDNPARQYRNVERSDKEQLVANLLPQVFRWARAVDASQPLTSGVWRG MSMEG_5877|M.smegmatis_MC2_155 WNEPDNPARQYRKVERSDKLDAVGALLPQVFGWARSVNAAQPLTSGVWQG Mflv_1032|M.gilvum_PYR-GCK WNEPDNPADVYREVERRDKVDRVAELLPQVFGWARSVDPVQPLTSGVWDG Mvan_5801|M.vanbaalenii_PYR-1 WNEPDNPADAYKDVERRDKVDRVAELLPQVFQWARSVDPVQPLTSGVWDG ******** *:.*** ** : *. ****** *** *:. ******** * Mb3123|M.bovis_AF2122/97 NWGDPGRRSTISAIQLDNADVITFHSYAAPAEFEGRIAELAPLQRPILCT Rv3096|M.tuberculosis_H37Rv NWGDPGRRSTISAIQLDNADVITFHSYAAPAEFEGRIAELAPLQRPILCT MMAR_1554|M.marinum_M NWSDPGKRSTIASIQLDNADVITFHSYAAPAGFEARIDELAPLGRPIICT MUL_3476|M.ulcerans_Agy99 NWSDPGKRSTIASIQLDNADVITFHSYAAPAGFEARIDELAPLGRPIICT MAV_0332|M.avium_104 DWGQPQGRSAISDIQLANADVITFHSYAEPAGFESRINELTPLGRPILCT MSMEG_5877|M.smegmatis_MC2_155 SWER-GRRSEMASFQLDNSDVISFHSYAGPDEFEARIAELEPLGRPILCT Mflv_1032|M.gilvum_PYR-GCK VWGDPARRTPVVRAQLDLSDVISFHSYADPRGFEDRLAELTPLGRPMLCT Mvan_5801|M.vanbaalenii_PYR-1 EWGDPARRNEINRIQLDLSDVITFHSYADRRGFEARLEELTPIGRPMLCT * *. : ** :***:***** ** *: ** *: **::** Mb3123|M.bovis_AF2122/97 EYLARSQGSTVEGILPIAKRHNVGAFNWGLVAGKTQTYLPWDSWDHPYRA Rv3096|M.tuberculosis_H37Rv EYLARSQGSTVEGILPIAKRHNVGAFNWGLVAGKTQTYLPWDSWDHPYRA MMAR_1554|M.marinum_M EYLARSQGSSVEGVLPIAKRRNVGAFNWGLVAGKTQTYLPWDSWDHPYTK MUL_3476|M.ulcerans_Agy99 EYLARSQDSSVEGVLPIAKRRNVGAFNWGLVAGKTQTYLPWDSWDHPYTK MAV_0332|M.avium_104 EYMARPRGSTVESILPVAKRHNVGAINWGLVAGKTQTYFPWESWDHPYTS MSMEG_5877|M.smegmatis_MC2_155 EYLARSEGSTLEGVLPVAKRHNVGAYSWGLVAGKTQTYFPWDSWDKPYTK Mflv_1032|M.gilvum_PYR-GCK EYMARTLDSTVESILPIMKRRNIGAYTWGFVAGKTQTFLPWDSWERPVIE Mvan_5801|M.vanbaalenii_PYR-1 EYMARTLDSTVETILPITRRRNVGAYTWGFFAGKTQTFLPWDSWDRPVTG **:**. .*::* :**: :*:*:** .**:.******::**:**::* Mb3123|M.bovis_AF2122/97 PPKVWFHDLLHPNGRPYRDGEVQTIRKLNGMPSQD Rv3096|M.tuberculosis_H37Rv PPKVWFHDLLHPNGRPYRDGEVQTIRKLNGMPSQD MMAR_1554|M.marinum_M PPKVWFSDLLQPDGRPYRESEIQTIQSLTGARTQD MUL_3476|M.ulcerans_Agy99 PPKVWFSDLLQPDGRPYRESEIQTIQSLTGARTQD MAV_0332|M.avium_104 VPKVWFHDLIRPEGRPFQDIEALTVRKLAGSPT-- MSMEG_5877|M.smegmatis_MC2_155 VPNVWFHDLLRPDGRPYKDSEYATLRKLTARV--- Mflv_1032|M.gilvum_PYR-GCK PP-LWFHDLLHGDGTPYRAGEVNTIRELTGRNRPS Mvan_5801|M.vanbaalenii_PYR-1 PPGLWFHDLLNGDGSPYRDSEINTIRELTGRRGP- * :** **:. :* *:: * *::.* .