For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPSAEEPQWLSPAEKEAWTGLVSLILLMPGRLEAPLRDVDLNLFEYLALSHISEAPHRRIRMSELAFLAN GSLSRLSNVVKRFEQRGWVTRSPDPSDGRYTLAELTDAGYRLVMTAAPIHLRAVREFVLDPLTASEQQAL ARIAEKLRIRPADLA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5724 | - | - | 100% (155) | transcriptional regulator MarR |
| M. smegmatis MC2 155 | MSMEG_5595 | - | 1e-18 | 35.17% (145) | MarR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_6824 | - | 1e-16 | 36.00% (125) | MarR-family protein regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2911 | - | 3e-07 | 32.76% (116) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_0520 | - | 3e-15 | 34.67% (150) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2887 | - | 3e-07 | 32.76% (116) | transcriptional regulatory protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0208 | - | 2e-08 | 32.67% (101) | MarR family transcriptional regulator |
| M. marinum M | MMAR_1075 | - | 3e-07 | 27.01% (137) | transcriptional regulator |
| M. avium 104 | MAV_4420 | - | 9e-07 | 26.28% (137) | transcriptional regulator, MarR family protein |
| M. thermoresistible (build 8) | TH_1664 | - | 3e-06 | 28.97% (107) | transcriptional regulator, MarR family protein |
| M. ulcerans Agy99 | MUL_0833 | - | 2e-07 | 27.01% (137) | transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_0148 | - | 2e-13 | 33.78% (148) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1075|M.marinum_M MAPD--NKRDPIAAARANWEAGGWGDVAQGMVAVTSVMRAHQILLARVEA
MUL_0833|M.ulcerans_Agy99 MAPD--NKRDPIAAARANWEAGGWGDVAQGMVAVTSVMRAHQILLARVEA
MAV_4420|M.avium_104 MADSRPHERDPIAAARANWERAGWGDVAPGMVAVTSVMRAHQILLARVET
MAB_0208|M.abscessus_ATCC_1997 ------------MSTRSESEVP-GLDLAEFRSWQNFWVATNRLNFLLNRK
TH_1664|M.thermoresistible__bu ------------------------LD------------AALRLYATLNKT
Mflv_0520|M.gilvum_PYR-GCK ---------------------MEWLSDEQQRIWRDYLAMVSKLHTAMHRQ
Mvan_0148|M.vanbaalenii_PYR-1 ---------------------MEWLSDEQQLIWRNYLAMVSRLHTAMHRQ
MSMEG_5724|M.smegmatis_MC2_155 ---------------MPSAEEPQWLSPAEKEAWTGLVSLILLMPGRLEAP
Mb2911|M.bovis_AF2122/97 ------------------------MGLADDAPLGYLLYRVGAVLRPEVSA
Rv2887|M.tuberculosis_H37Rv ------------------------MGLADDAPLGYLLYRVGAVLRPEVSA
. :
MMAR_1075|M.marinum_M ALRPYDLSFSRYELLRLLAFSRTGALPITKASDRLQVHVTSVTHAIRRLE
MUL_0833|M.ulcerans_Agy99 ALRPYDLSFSRYELLRLLAFSRTGALPITKASDRLQVHVTSVTHAIRRLE
MAV_4420|M.avium_104 ALRPYDLSFSRYELLRLLAFSRTGALPITKASDRLQVHVTSVTHAIRRLE
MAB_0208|M.abscessus_ATCC_1997 MVASHSISLTDFHVLQQLLRSANGSCRMGDIANSLLASRSRITHQVRRLE
TH_1664|M.thermoresistible__bu LVDEHHLTLNDVRLLDMLDKSPSGSARMGDLADALMSLPSRVTRQIRRLE
Mflv_0520|M.gilvum_PYR-GCK LQQDCELSLSDYDVLVALSER--GPMRINELGELIGWEQSRLSHQLRRMR
Mvan_0148|M.vanbaalenii_PYR-1 LQQDCELSLSDYDVLVALSER--GPMRINELGELIGWEQSRLSHQLRRMR
MSMEG_5724|M.smegmatis_MC2_155 LR-DVDLNLFEYLALSHISEAPHRRIRMSELAFLANGSLSRLSNVVKRFE
Mb2911|M.bovis_AF2122/97 ALSPLGLTLPEFVCLRMLSQS--PGLSSAELARHASVTPQAMNTVLRKLE
Rv2887|M.tuberculosis_H37Rv ALSPLGLTLPEFVCLRMLSQS--PGLSSAELARHASVTPQAMNTVLRKLE
:.: * : . . :. ::::.
MMAR_1075|M.marinum_M ADGLVRRVPHPTDGRTTLVQITDLGRSTVEDATVTLNEHVFANIGMSTGE
MUL_0833|M.ulcerans_Agy99 ADGLVRRVPHPTDGRTTLVQITDLGRSTVEDATVTLNEHVFANIGMSTGE
MAV_4420|M.avium_104 ADGLVQRVPHPTDGRTTLVQITELGRSTVEDATVTLNKQVFADIGMSDTE
MAB_0208|M.abscessus_ATCC_1997 EQGLVKRGSMPQDRRAVLAALTEQGRTLGEAAMRTYSECVREHYLMRLTR
TH_1664|M.thermoresistible__bu AHNLVRRCASPDDGRGVLAIITDAGREEVRKAMVTYGNEVRVHFLSRLSR
Mflv_0520|M.gilvum_PYR-GCK GRGLVEREGDGDDRRGATVALTDAGLAAVQTAAPGHVDLVRTVVFDGLSK
Mvan_0148|M.vanbaalenii_PYR-1 GRGLVGREGDGDDRRGATVALTDAGLAALRTAAPGHVDLVRTMVFDGLTP
MSMEG_5724|M.smegmatis_MC2_155 QRGWVTRSPDPSDGRYTLAELTDAGYRLVMTAAPIHLRAVREFVLDPLTA
Mb2911|M.bovis_AF2122/97 DAGAVARPASVSSGRSLPATLTARG-RALAKRAEAVVRAADARVLARLTA
Rv2887|M.tuberculosis_H37Rv DAGAVARPASVSSGRSLPATLTARG-RALAKRAEAVVRAADARVLARLTA
. * * . * . :* * .
MMAR_1075|M.marinum_M SEALVSSIETLRRSAGDF-------------
MUL_0833|M.ulcerans_Agy99 SEALVSSIETLRRSAGDF-------------
MAV_4420|M.avium_104 SQQLASSIETLRRNAGDF-------------
MAB_0208|M.abscessus_ATCC_1997 PQQAAIAESFRRVGEGAEEALHDGDGRGGE-
TH_1664|M.thermoresistible__bu PQIAAMGENCRRISAGLRADGP--PARLGRV
Mflv_0520|M.gilvum_PYR-GCK AEERAFGATIAAVLERLNARSAG--------
Mvan_0148|M.vanbaalenii_PYR-1 AAQREFGAAVETVLSRLRAAGSTD-------
MSMEG_5724|M.smegmatis_MC2_155 SEQQALARIAEKLRIRPADLA----------
Mb2911|M.bovis_AF2122/97 PQQREFKRMLEKLGSD---------------
Rv2887|M.tuberculosis_H37Rv PQQREFKRMLEKLGSD---------------
.