For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTIVTVNERNARVAAAVAAAGIEPAIRILDADAKTAAAAAEQLGCEVGAIANSLVFECDGEPLLVMASGA ARVDTDVLARHLGAGAITKANPKLVRAATGQVIGGVAPTGHPQLLRTVVDETLASYPVIWTAAGTADSVM PLTYGQLLTLTGGKALPVR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5671 | - | - | 100% (159) | YbaK/prolyl-tRNA synthetase associated region |
| M. smegmatis MC2 155 | MSMEG_1913 | ybaK | 5e-05 | 23.78% (143) | YbaK/ebsC protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4690 | - | 8e-07 | 27.08% (144) | ybaK/ebsC protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_00799 | - | 2e-05 | 29.76% (84) | hypothetical protein MLBr_00799 |
| M. abscessus ATCC 19977 | MAB_0770 | - | 3e-32 | 46.36% (151) | hypothetical protein MAB_0770 |
| M. marinum M | MMAR_1332 | - | 1e-07 | 25.83% (151) | hypothetical protein MMAR_1332 |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2547 | - | 2e-07 | 27.27% (110) | hypothetical protein MUL_2547 |
| M. vanbaalenii PYR-1 | Mvan_1777 | - | 3e-05 | 24.31% (144) | ybaK/ebsC protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4690|M.gilvum_PYR-GCK MTGSDSRSAGQNNSGRGRACSRAAAAYAVPVARAATPAIAALVAAGVAHD
Mvan_1777|M.vanbaalenii_PYR-1 ------MAAG---------VVVPCPAYAVPVARAATPAVAALVAAGVAHE
MMAR_1332|M.marinum_M ------------------------------MARAATPGVAALIKAGVTHE
MUL_2547|M.ulcerans_Agy99 --------------------------------------------------
MLBr_00799|M.leprae_Br4923 --------------------------------------------------
MSMEG_5671|M.smegmatis_MC2_155 -------------------------MTIVTVNERNARVAAAVAAAGIEPA
MAB_0770|M.abscessus_ATCC_1997 -------------------------MTEVLP-ETSRQLQATLAGLGCRGR
Mflv_4690|M.gilvum_PYR-GCK VVQYHHDPRTDSFGAEAVSELAGAGGLAP--EQIFKTLVVSLPRGLGVAV
Mvan_1777|M.vanbaalenii_PYR-1 VLQYRHDPRSESFGEEAVKELAQAGGLAP--AQILKTLVVALPKGLGVAV
MMAR_1332|M.marinum_M LLHF-----------EAVTDLSDRADIAP--EQVFKTLIIALPGELAVAV
MUL_2547|M.ulcerans_Agy99 ---------------------------------MFKTLVIALPGEFAVAV
MLBr_00799|M.leprae_Br4923 -MQF-----------DTVNNLSRN-TLTPRLSRYSKTLIIALPRELAIAI
MSMEG_5671|M.smegmatis_MC2_155 IRILD---------ADAKTAAAAAEQLGCEVGAIANSLVFECDGEPLLVM
MAB_0770|M.abscessus_ATCC_1997 IRQLP---------DSTHSANDASAAIGCAIDAIASSLLFMADDSPLLVM
.:*:. :.:
Mflv_4690|M.gilvum_PYR-GCK LPVPSKLSLKAAAAALGAAKATMADPAAAQRSSGYVVGGISPLGQRKALP
Mvan_1777|M.vanbaalenii_PYR-1 LPVPSKLSLKAAAAALGAARATMADPADAQRSSGYVVGGISPLGQRKALP
MMAR_1332|M.marinum_M VPVPSRLSLKAAASALGAAKASMAQPADAERTTGYVVGGISPFGQRRKLR
MUL_2547|M.ulcerans_Agy99 VPVPSRLSLKAAASALGAAKASMAEPADAERTTGYVVGGISPFGQRRKLR
MLBr_00799|M.leprae_Br4923 LSAPSRLSLKETAAAPGVTKANTAEPAAAQRATSYVVGGVFPSGQWKRLR
MSMEG_5671|M.smegmatis_MC2_155 ASGAARVDTDVLARHLGAGAITKANPKLVRAATGQVIGGVAPTGHPQLLR
MAB_0770|M.abscessus_ATCC_1997 ASGAHRVDTDRVAQLVGALKVRLAPAKAVAKITGQVVGGVAPVGHPNPIR
. . ::. . * *. * . . :. *:**: * *: . :
Mflv_4690|M.gilvum_PYR-GCK TVVDASALNWDRILCSAGKRGWDVSLDPRD---LVRLTNAVTADICAL
Mvan_1777|M.vanbaalenii_PYR-1 TVVDSSAMQWDRVLCSAGKRGWDVALDPRD---LVRLTNAVTADICAP
MMAR_1332|M.marinum_M TVVDSSALTWDRVLCSAGKRHWDVAVPPAD---LVRLTDALTADIRA-
MUL_2547|M.ulcerans_Agy99 TVVDSSALTWDRVLCSAGKRHWDVAVPPAD---LVRLTDALTADIRA-
MLBr_00799|M.leprae_Br4923 TVVDTSALSWDRVLCNAGKRHRLLAPGCRGEPGYVRHPSGWRSAERCW
MSMEG_5671|M.smegmatis_MC2_155 TVVDETLASYPVIWTAAGTADSVMPLTYGQ---LLTLTGGKALPVR--
MAB_0770|M.abscessus_ATCC_1997 TLVDSTLEKWDEIWAAGGTPRTVFPLTFAE---LVRITGGQVCEVA--
*:** : : : .*. .. : ...