For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PASPYTVNCSILLTELPLLQRPEAARAAGFDAVEFWWPFAEATPSDREVDEFVSAISDAGVQLTGLNFAA GDMPGGERGILSHPGRSADFRASVDIAVEIAKRLGTKAFNALYGNRRDDAGVDEQDAAAVENLIYASEAT RAIDAVVLIEPVSGSPLYPLKLAADAVAVIDRVAAQSDGTANNLRLLADVYHMSVNGDDVPAALEGHADL IGHVQIADAPGRGEPGTGSLPLAGYLEQLAGYGYRGYVGLEYKASREDPFDWLPLEHRSVHARADR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5478 | - | - | 100% (277) | hydroxypyruvate isomerase, putative |
M. smegmatis MC2 155 | MSMEG_4653 | - | 5e-13 | 25.48% (259) | AP endonuclease, family protein 2 superfamily protein |
M. smegmatis MC2 155 | MSMEG_2005 | - | 1e-05 | 25.40% (252) | sugar phosphate isomerase/epimerase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2604 | - | 9e-14 | 26.05% (261) | xylose isomerase domain-containing protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4012 | - | 4e-13 | 24.23% (260) | xylose isomerase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2604|M.gilvum_PYR-GCK -MTFQLAVCAEMVFQDLPLLDRVERIHELGFAVEIWSWHDKDLAALAATG Mvan_4012|M.vanbaalenii_PYR-1 -MSFQLAVCAEMVFTDLPILDRVRRIDELGFAAEIWSWHDKDLAALATTG MSMEG_5478|M.smegmatis_MC2_155 MPASPYTVNCSILLTELPLLQRPEAARAAGFDAVEFWWPFAEATPSDREV : :* ..::: :**:*:* . ** . : * : :. Mflv_2604|M.gilvum_PYR-GCK ATFTSMTGYLHGDLIDPQSCDEVVRTAELSVT-----AAEALGVTRLNLH Mvan_4012|M.vanbaalenii_PYR-1 ATFTSMTGYLHGDLIDPATCDEVVRTAERSIR-----AAETLGVTRLNLH MSMEG_5478|M.smegmatis_MC2_155 DEFVSAISDAGVQLTGLNFAAGDMPGGERGILSHPGRSADFRASVDIAVE *.* . :* . . : .* .: :*: . . : :. Mflv_2604|M.gilvum_PYR-GCK TAELVDGRAARPRY---RADGRMWATALRTLERIGELGARAGVTFCVENL Mvan_4012|M.vanbaalenii_PYR-1 TAELVDGRAARPRQ---RSTGQMWLTAARTLERVGELGAASGVTFCVENL MSMEG_5478|M.smegmatis_MC2_155 IAKRLGTKAFNALYGNRRDDAGVDEQDAAAVENLIYASEATRAIDAVVLI *: :. :* .. * . : ::*.: . : . .* : Mflv_2604|M.gilvum_PYR-GCK NTVVDHPGVPLARAKDTLALVEGVGHA------HVKMMLDLYHAQIGEGN Mvan_4012|M.vanbaalenii_PYR-1 NTIVDHPGVPLARAKDTLALVEGVGHP------NVKMMLDLYHAQIGEGN MSMEG_5478|M.smegmatis_MC2_155 EPVSGSPLYPLKLAADAVAVIDRVAAQSDGTANNLRLLADVYHMSVNGDD :.: . * ** * *::*::: *. ::::: *:** .:. .: Mflv_2604|M.gilvum_PYR-GCK LCELVRRCGDAIGEIQIADVPGRCEPGTGEINYPAIAATLRDIGYTGTVG Mvan_4012|M.vanbaalenii_PYR-1 LIELIHRCKDAIGEIQVADVPGRCEPGTGEINYQAIANALRDIGFDGTIG MSMEG_5478|M.smegmatis_MC2_155 VPAALEGHADLIGHVQIADAPGRGEPGTGSLPLAGYLEQLAGYGYRGYVG : :. * **.:*:**.*** *****.: . * . *: * :* Mflv_2604|M.gilvum_PYR-GCK MEGWASQPGTPGSEAALSAFRAAFEPDYRSTSVVSK Mvan_4012|M.vanbaalenii_PYR-1 MEAWASNAGVAGSEAALAAFRTAFA----------- MSMEG_5478|M.smegmatis_MC2_155 LEYKASREDP--FDWLPLEHRSVHARADR------- :* **. . : .*:..