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VSGHQPGHPVRGVAASLGASALFGLIFYISGVVDAPSEMVFGCRILVTFGCYAVLLLHPTARAALAAYWA ALRAARWNPALLAGLSLLVGLQLWLFIWGPMHGHALSISLGYLLLPIVLVLAGRFVLSAHVTTAQWVAVA IAGVAVASKISLSPDVSWTTFAVCLGYPLYFVIRRRAGLDGPAAFGVEMAVLGPVAIALVALADTSGVSP SGYAGVAAVAFAGAAGMAAFLAASRLLTLPVFGLLGYSEPVLLVGVAILLGERIQAPDLVVYAMLAVALA ILATDGFRTARRAGTTVHSRSRQPEDCVTTTG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5462 | rarD | - | 100% (312) | RarD protein |
| M. smegmatis MC2 155 | MSMEG_3176 | rarD | 4e-12 | 24.35% (230) | RarD protein |
| M. smegmatis MC2 155 | MSMEG_0468 | - | 4e-06 | 26.83% (246) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3638 | - | 4e-18 | 27.08% (288) | transporter DMT superfamily protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2698c | - | 2e-12 | 27.73% (220) | putative RarD protein |
| M. marinum M | MMAR_1984 | - | 8e-05 | 22.96% (270) | hypothetical protein MMAR_1984 |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0580 | rarD | 4e-16 | 26.92% (286) | RarD protein |
| M. ulcerans Agy99 | MUL_3372 | - | 5e-05 | 22.96% (270) | hypothetical protein MUL_3372 |
| M. vanbaalenii PYR-1 | Mvan_2775 | - | 7e-16 | 27.06% (218) | transporter DMT superfamily protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3638|M.gilvum_PYR-GCK -------------MRTGLFFGAGAYVMWGLFPAFFPLLKPAGALEILAHR
Mvan_2775|M.vanbaalenii_PYR-1 -------------MRSGLLYGAGAYVMWGLFPAFFPLLKPAGAVEILAHR
MAB_2698c|M.abscessus_ATCC_199 MSGLPAIPEQNRSPKSGYLFGAAAYLMWGLFPAFFPLLEPAGALEILAHR
TH_0580|M.thermoresistible__bu ---------MVNTRRQGLLCGVGAYLWWGLCPGYFPLLAPAGSVEVLAHR
MMAR_1984|M.marinum_M ----MTTTEIAAVLALGAAFASALGNVTRQRSAQEITDEQVGHLELFWLS
MUL_3372|M.ulcerans_Agy99 ----MTTTEIAAVLALGAAFASALGNVTRQRSAQEITDEQVGHLELFWLS
MSMEG_5462|M.smegmatis_MC2_155 -----MSGHQPGHPVRGVAASLGASALFGLIFYISGVVDAPSEMVFGCRI
* . . . : .
Mflv_3638|M.gilvum_PYR-GCK IIWS-----FVLMVVVVAAVRRMRDIAAISGRTWLLLTAASALIAANWLI
Mvan_2775|M.vanbaalenii_PYR-1 VIWS-----FAMMVVVVAAVRRLGDIKAIDRRTWLLLVAAAALISANWLI
MAB_2698c|M.abscessus_ATCC_199 MIWT-----LLLMAVVVAVSRRLRDLVAMGLRNWGLLIGASLLIALNWGV
TH_0580|M.thermoresistible__bu IVWS-----VVFLLVVLTVARRLGDLVRLSARTWLYLAAASALISLNWGT
MMAR_1984|M.marinum_M LRDS-----RWWLGALGAIANYLLQAAALTLG-SVVLVSALQVTALLFAL
MUL_3372|M.ulcerans_Agy99 LRDS-----RWWLGALGAIANYLLQAAALTLG-SVVLVSALQVTALLFAL
MSMEG_5462|M.smegmatis_MC2_155 LVTFGCYAVLLLHPTARAALAAYWAALRAARWNPALLAGLSLLVGLQLWL
: . : * . : .
Mflv_3638|M.gilvum_PYR-GCK YVYAVNNGHVVD-----AALGYFINPLVSIALG---LVIFREKLNRWQGS
Mvan_2775|M.vanbaalenii_PYR-1 FVYAVNNGHVVD-----AALGYFINPLVSIALG---MLVFREKLNRWQFT
MAB_2698c|M.abscessus_ATCC_199 YIYAVNSGHVLD-----AALGYYINPLVTVLLG---VVLFREPLSRWQLL
TH_0580|M.thermoresistible__bu YIYAVMNDHVVD-----AALGYFINPLVSVALG---VLVLGERVGGLQRI
MMAR_1984|M.marinum_M PIYARVTRRRVTRWEWTWAVLLAVSLAVVVIVGDPDVGVSRGSLATWMVV
MUL_3372|M.ulcerans_Agy99 PIYARVTRRRVTRWEWTWAVLLAVSLAVVVIVGDPDVGVSRGSLATWMVV
MSMEG_5462|M.smegmatis_MC2_155 FIWGPMHGHALS-----ISLGYLLLPIVLVLAG---RFVLSAHVTTAQWV
::. : : :: : * : * : :
Mflv_3638|M.gilvum_PYR-GCK ALAIAVVAVVVLTIQLGEPPVVGLGLALSFGLYGLVKKLVPTDPRVSVGI
Mvan_2775|M.vanbaalenii_PYR-1 ALAIAVAAVAILTVQLGQPPVVGLGLALSFGLYGAVKKVVRTDPRVSVGI
MAB_2698c|M.abscessus_ATCC_199 ALVLAFTAVAVLTISVGRLPVITLILAASFAGYGAIKKTITVDPRVSLTA
TH_0580|M.thermoresistible__bu ALAVAAVAVVVLTVEVGQPPYIALVLAASFGIYGLVKKVVDADPRVGVAV
MMAR_1984|M.marinum_M ASVLGPVMVFCVLGARIWSGSVAAVLLAVVSGCSLALFAVLTKAVVEVVG
MUL_3372|M.ulcerans_Agy99 ASVLGPVMVFCVLGARIWSGSVAAVLLAVVSGCSLALFAVLTKAVVEVVG
MSMEG_5462|M.smegmatis_MC2_155 AVAIAGVAVASKISLSPDVSWTTFAVCLGYPLYFVIRRRAGLDGPAAFGV
* .:. . * : . . .
Mflv_3638|M.gilvum_PYR-GCK EAAIATPFAVAYLVALQSGGGGTLTGHG--GGHVALLILAGVLTALPLL-
Mvan_2775|M.vanbaalenii_PYR-1 EAAIATPFAIGYLVALQASGGGTLTGHG--ASHIALLILSGVLTALPLL-
MAB_2698c|M.abscessus_ATCC_199 EGIVAAPFAGAYLVFVGVSGQQHFLGYT--HGHTALMVLSGVVTALPLL-
TH_0580|M.thermoresistible__bu ETLLALPLAGGFLIALHLLGEGSFGNHG--AGHTVLLLAAGPVTAIPLL-
MMAR_1984|M.marinum_M GGAGALFRAPEFYVWIAAALGGMIFQQSSFRAGTLTASLPTVVVAKPLMG
MUL_3372|M.ulcerans_Agy99 GGAGALFRAPEFYVWIAAALGGMIFQQSSFRAGTLTASLPTVVVAKPLMG
MSMEG_5462|M.smegmatis_MC2_155 EMAVLGPVAIALVALADTSGVSPSGYAG-----VAAVAFAGAAGMAAFL-
* . .::
Mflv_3638|M.gilvum_PYR-GCK ----------LFARAAQLLPMVTLGLLFYVTPTMQLTWGVLVGGEPMPPM
Mvan_2775|M.vanbaalenii_PYR-1 ----------LFAAAAQRLAMVSLGLLFYVNPAMQLSWGVLVGGEPMPPM
MAB_2698c|M.abscessus_ATCC_199 ----------LFGAAAQRIPLVTLGLLQYVTPTLQMLWGVLVKHEAMPPE
TH_0580|M.thermoresistible__bu ----------LFAAAAQRLPLVVLGLLFYLNPALQMAWGVLVNHESMPLG
MMAR_1984|M.marinum_M AVLGMVVLGETLDTTGPGLVVVAFGVVLVLVATIALARGEAEKVAEEAVE
MUL_3372|M.ulcerans_Agy99 AVLGMVVLGETLDTTGPGLVVVAFGVVLVLVATIALARGEAEKVAEEAVE
MSMEG_5462|M.smegmatis_MC2_155 -------------AASRLLTLPVFGLLGYSEPVLLVGVAILLG-ERIQAP
:. : : :*:: ..: : .
Mflv_3638|M.gilvum_PYR-GCK RWFGFALIWVALAVFTVD---AVRR--ARADRRVSATPVA----------
Mvan_2775|M.vanbaalenii_PYR-1 RWLGFALIWLALLVFTGD---ALRR--ARVQRRAARPCPA----------
MAB_2698c|M.abscessus_ATCC_199 RWVGFVLIWAALVIFTAD---TVRS--ALILPRQSGRPATVSPIDMVSVK
TH_0580|M.thermoresistible__bu RWIGFALIWVALAVMAVD---ALRRGGAGTPNRPAAVPDRVVP-------
MMAR_1984|M.marinum_M SGHIPATMPHRAVTMHFG---PADD--DVQTDRLRRAPAG----------
MUL_3372|M.ulcerans_Agy99 SGHIPATMPHRAVTMHFG---PADD--DVQTDRLRRAPAG----------
MSMEG_5462|M.smegmatis_MC2_155 DLVVYAMLAVALAILATDGFRTARRAGTTVHSRSRQPEDCVTTTG-----
. : : . . *
Mflv_3638|M.gilvum_PYR-GCK ---
Mvan_2775|M.vanbaalenii_PYR-1 ---
MAB_2698c|M.abscessus_ATCC_199 GRD
TH_0580|M.thermoresistible__bu ---
MMAR_1984|M.marinum_M ---
MUL_3372|M.ulcerans_Agy99 ---
MSMEG_5462|M.smegmatis_MC2_155 ---