For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LLRYETNEVTMKTRTARSSTTLRRTLLACAMSFAVVAVGACSTTEPGTGNPGGEGSTLDRIKADKKINVG FANERPYAYRENGQLVGEDPAIHGHIFNEIGGITLEPHLFEFGSLIQALNSERVDVVTAGMFITPQRCEQ AAFSNPVYVATTSLLVPSGNPKGLSDYASVANGDARLAVMNGAVEVEQAKGSGVPDDRLQIVADQQAGLD AVKTGRADAFALTSISLRALAANDNSVEVADAFVPVIDGKEQVGAGAAVFRKNDTALREAFNEKLAELIQ SPKWLELVEPYGFTEAERPDPGLTAEELCQG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5368 | ehuB | - | 100% (311) | ectoine/hydroxyectoine ABC transporter solute-binding protein |
M. smegmatis MC2 155 | MSMEG_3547 | ehuB | 2e-38 | 35.51% (276) | ectoine/hydroxyectoine ABC transporter solute-binding |
M. smegmatis MC2 155 | MSMEG_2727 | - | 9e-12 | 26.52% (264) | glutamate binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3969 | - | 5e-10 | 26.99% (289) | extracellular solute-binding protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_1785 | - | 1e-06 | 24.88% (213) | glutamate binding protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2427 | - | 1e-11 | 27.62% (286) | extracellular solute-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3969|M.gilvum_PYR-GCK MFPKSTS-----TRIAG------ALALAAALPFAMTACGG------GGDS Mvan_2427|M.vanbaalenii_PYR-1 MSPKSLS-----ARVVG------ALALAAALPFAATACGG------GDGG TH_1785|M.thermoresistible__bu MPFTSTSLLGRCLRRGA------AVALAVGLALTATACGA------DRDE MSMEG_5368|M.smegmatis_MC2_155 MLRYETNEVTMKTRTARSSTTLRRTLLACAMSFAVVAVGACSTTEPGTGN * . . * ** .:.:: .* *. . . Mflv_3969|M.gilvum_PYR-GCK GGGGGAGGDTIVIGTKFDQPGLGQK----NPDGTMSGFDVDVATYVAGEL Mvan_2427|M.vanbaalenii_PYR-1 GGGAGGGGDTIVIGTKFDQPGLGQK----NPDGTMSGFDVDVATYVAGEL TH_1785|M.thermoresistible__bu --------NTVVIGTKFDQPGLAMK----NEDGSMSGFDVAVAEYVAQEL MSMEG_5368|M.smegmatis_MC2_155 PGGEGSTLDRIKADKKINVGFANERPYAYRENGQLVGEDPAIHGHIFNEI : : ..*:: : . :* : * * : :: *: Mflv_3969|M.gilvum_PYR-GCK GYAPDKIEWKESPSAQRETLIQNGQVTFIAATYSITDSRKEKVAFAGPYL Mvan_2427|M.vanbaalenii_PYR-1 GYTPDKIEWKESPSAQRENLIQNGQVTFIAATYSITDARKEKVSFAGPYL TH_1785|M.thermoresistible__bu GYAPEDIEWKEAPSNQRETLIQNGQVDFIVGTYSITDSRKERIDFAGPYL MSMEG_5368|M.smegmatis_MC2_155 GGITLEPHLFEFGS--LIQALNSERVDVVTAGMFITPQRCEQAAFSNPVY * . . . * * ::. :* .:.. ** * *: *:.* Mflv_3969|M.gilvum_PYR-GCK ITGQSLLVRNDN-NDITGAASLEN-NKILCSVSGSTPAQKIK-DEYQGVQ Mvan_2427|M.vanbaalenii_PYR-1 ITGQSLLVRSDN-TDITGEASLEN-NKILCSVSGSTPAQKIK-DKYQGVQ TH_1785|M.thermoresistible__bu ITGQSLLVRADD-TDITGPASLEN-NKLLCSVTGSTPAQRIK-DEYPGVQ MSMEG_5368|M.smegmatis_MC2_155 VATTSLLVPSGNPKGLSDYASVANGDARLAVMNGAVEVEQAKGSGVPDDR :: **** .: ..::. **: * : *. :.*:. .:: * . . : Mflv_3969|M.gilvum_PYR-GCK LQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQ-SPGTFKIVGEPFSE Mvan_2427|M.vanbaalenii_PYR-1 LQQYDTYSACIDALKNGAVDAVTTDEVILAGYAAQ-SPGAFKIVGEPFSE TH_1785|M.thermoresistible__bu LQEYDTYSACVEALRNNAVDAVTTDEVILAGYAAQ-SPDDLRVVGQPFSE MSMEG_5368|M.smegmatis_MC2_155 LQIVADQQAGLDAVKTGRADAFALTSISLRALAANDNSVEVADAFVPVID ** .* ::*::.. .**.: .: * . **: .. . . *. : Mflv_3969|M.gilvum_PYR-GCK ERYGIG-----LKKDDAELRTKINDALKKMEDSGAWKEAFDKNLGPAGIT Mvan_2427|M.vanbaalenii_PYR-1 ERYGIG-----LKKDDTELRTKINDALKKMEESGAWKEAFDKNLGPAGIT TH_1785|M.thermoresistible__bu ERYGIG-----LAKGDTELKEKINAAIEKMQQDGEWQRAFEVNLGDAGID MSMEG_5368|M.smegmatis_MC2_155 GKEQVGAGAAVFRKNDTALREAFNEKLAELIQSPKWLELVEP-YGFTEAE : :* : *.*: *: :* : :: :. * . .: * : Mflv_3969|M.gilvum_PYR-GCK APAPPPLDN----- Mvan_2427|M.vanbaalenii_PYR-1 APTPPPLDN----- TH_1785|M.thermoresistible__bu TPTPPTVDRN---- MSMEG_5368|M.smegmatis_MC2_155 RPDPGLTAEELCQG * * .