For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_5360 (-)

annotation: formate/nitrate transporter
coordinates: 5441164 - 5442024
length: 286

SYVSPSDFVGKMIDAGEAKAHMSTRDTLIRAYMAGAILAIAAAFAVTITVQTGNALVGAILFPVGFCLLY
LLGFDLLTGVFTLVPLALLDKRRGVTVRTVLRNWGWVFLGNFAGALTVAFMMAIVFTYGFSVDPNEVGQR
IGEIGHSRTVGYAEHGAAGMLTLFIRGVLCNWMVSTGVVAAMMSTSVSGKVIGMWMPVMLFFYMGFEHSV
VNMFLFPSGLMLGGDFSIADYFIWNEIPTAVGNLVGGLTFVGLTLFATHARTAAPRFSIPAVAEPHSAEA
RKISA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_5360--100% (286)formate/nitrate transporter
M. smegmatis MC2 155MSMEG_4318-5e-1223.72% (253) hypothetical protein MSMEG_4318

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_1996-1e-13687.27% (267) formate/nitrite transporter
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum M-----
M. avium 104MAV_2490-1e-0825.00% (264) formate/nitrite transporter superfamily protein
M. thermoresistible (build 8)TH_1321-3e-1123.87% (243) hypothetical protein MSMEG_4318
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_2756-1e-13284.36% (275) formate/nitrite transporter

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_5360|M.smegmatis_MC2_155      ------------------------------MSYVSPSD--FVGKMIDAGE
Mflv_1996|M.gilvum_PYR-GCK          --------MFRIGNTLRELFREHPAPERFHMSYVSPSE--FVGKMIDAGE
Mvan_2756|M.vanbaalenii_PYR-1       ------------------------------MSYVDPPQ--FVSKMIDAGE
MAV_2490|M.avium_104                MTINASAPQRQGAVAVVDTVTALPAAVAGDGGTADPFEPLTVGAMVDRVS
TH_1321|M.thermoresistible__bu      ------VHFAHARGYPTAVSDTSQRDLGDSDSPIEDALEEAFRRMVDEGT
                                                                   .  .      .  *:*   

MSMEG_5360|M.smegmatis_MC2_155      AKAHMSTRD---TLIRAYMAGAILAIAAAFAVTITVQTGN----ALVGAI
Mflv_1996|M.gilvum_PYR-GCK          SKALMSTRD---TLIRAFMAGAILALAAAFAVTITVQTGN----PLLGAV
Mvan_2756|M.vanbaalenii_PYR-1       NKVFMSARD---TVIRAYMAGAILALAAAFAVTITVQTGN----ALLGAV
MAV_2490|M.avium_104                AMAVEKAAHPWAFLMRSLVGGAMVAFGVLLALVVSTGVKTPGVASLLMGL
TH_1321|M.thermoresistible__bu      QRLHRRWRE---VLVTGFFGGTEIAVGVLAYLAVLHVTHN----HLLAGL
                                            .    :: . ..*: :*...   :.:   . .     *: .:

MSMEG_5360|M.smegmatis_MC2_155      LFPVGFCLLYLLGFDLLTGVFTLVPLALLDKRRGVTVRTVLRNWGWVFLG
Mflv_1996|M.gilvum_PYR-GCK          LFPVGFCLLYLLGFDLLTGVFTLVPLAMLDKRRGVTFCSMMRNWGLVFVG
Mvan_2756|M.vanbaalenii_PYR-1       LFPVGFCLLYLMGFDLLTGVFTLVPLALLDKRRGVTVGSMLRNWGLVFVG
MAV_2490|M.avium_104                AFGMSFVLILVSGMSLITADMAAGFLAVLQR--ALSIRSYVVLVAVGLVG
TH_1321|M.thermoresistible__bu      AFSIGFLALLLGRSELFTEGFLIPVTTVAAKR--ASVAQLMKLWGGTLAA
                                     * :.*  : :   .*:*  :     ::  :    :.   :   .  : .

MSMEG_5360|M.smegmatis_MC2_155      NFAGALTVAFMMAIVFTYGFSVDPNEVGQRIGEIGHSRTVGYAEHGAAGM
Mflv_1996|M.gilvum_PYR-GCK          NLGGAIVVALMMAVVFTFGFSVDPNEVGQRLGEIGHSRTVGYAEHGAAGM
Mvan_2756|M.vanbaalenii_PYR-1       NFLGALTVAVMIAVTLTYGFTVDPNEVGQRLGEIGSSRTVGYAEHGAAGM
MAV_2490|M.avium_104                NIVGALVFVTVCAAAG-----------GPYLGAFADRAATVGTQKAGQPF
TH_1321|M.thermoresistible__bu      NLVGGWVLMWLIMTAF------------PRLHAQTTESAAHYATAPLS--
                                    *: *. ..  :   .               :       :.  :       

MSMEG_5360|M.smegmatis_MC2_155      LTLFIRGVLCNWMVSTGVVAAMMSTSVSGKVIGMWMPVMLFFYMGFEHSV
Mflv_1996|M.gilvum_PYR-GCK          LTLFIRAVLCNWMVSTGVVAAMMSTSVSGKVIAMWMPIMLFFYMGFEHSI
Mvan_2756|M.vanbaalenii_PYR-1       LTLFVRGVLCNWMVSTGVVAAMMSTSVSGKVITMWMPIMLFFYMGFEHSV
MAV_2490|M.avium_104                WTALLLAVLCTWFLQTSMCMFFKARSDVARMALAFYGPFAFVIGGTQHVI
TH_1321|M.thermoresistible__bu      AETMCLALLGGMVITLMTRMQHGTDAMIGKIAAAVAGGFLLAGLQMFHSI
                                       :  .:*   .:         : :  .::       : :      * :

MSMEG_5360|M.smegmatis_MC2_155      VNMFLFPSGLMLGGDFSIADY-----------FIWNEIPTAVGNLVGGLT
Mflv_1996|M.gilvum_PYR-GCK          VNMFLFPSGLMLGGDFSIADY-----------LIWNEIPTVLGNLVGGLT
Mvan_2756|M.vanbaalenii_PYR-1       VNMFLFPSGLMLGGDFSIADY-----------LIWNEIPTVVGNLVGGLA
MAV_2490|M.avium_104                ANVGFVGLPLLLNLFHPIAARGDIGWGFGDHGLLTNIGVTTVGNLIGGTV
TH_1321|M.thermoresistible__bu      LDSLLIFGALIAG-DAPFGYLD----------WLRWFGYTVVGNVAGGLG
                                     :  :.   *: .   .:.              :     *.:**: **  

MSMEG_5360|M.smegmatis_MC2_155      FVGLTLFATHARTAAPR-FSIPAVAEPHSAEARKISA
Mflv_1996|M.gilvum_PYR-GCK          FVGLTLFATHARTGETRLVELPTEDRSLVGAAGRVLR
Mvan_2756|M.vanbaalenii_PYR-1       FVGLTLYATHARTGGEWNRPAGSEDFAIPVKANA---
MAV_2490|M.avium_104                FVALPFWIIAHLQRRRLLSTGALRPDG----------
TH_1321|M.thermoresistible__bu      LVTMLRLLRSKERLQEERRDAEAE-------------
                                    :* :