For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTGTKTTEDVDRSGGEPHAARAAGHHEAPDKPAWWVRHYTFFGTATGLVFIWLSLTPSLLPRGPLFQGLV SGGAGAIGYGLGVFGVWLVRYMCSADSSPKAPRWAWVALVVVGIVGQILMIVYFHVWQDEIRDFMGVPRL KFWDHPLTAVLSIVVLYVLVEIGQLIGKLVRFLVRQLDRVAPPRVSAVVVVALLLALSIALLNGVVARFA MSTINKTFAAVNDEDSPDFSAPTSPLRSGGPGSLASWESLGHQGRVFVASAPTVQQLSEFNGAPAVEPIR AYAGLHSADGIKATAALAARELERTGGLDRAVVAVATTTGTGWINNAEATALEYMYNGDTAIVSMQYSYL PSWLSFLVDKENARQAGQALFEAVDELIRERPEADRPKLVVFGESLGSFGGEAPFLALNNLIARTDGALF SGPTFNNTIWADLTRNRDPGSPEWLPIYDKGENVRFVAEAGDLGRPEDPWSTPRVVYLQHASDPIAWWNT DLLFSKPDWLREPRGYDVSPHTEWIPVVTFLQVSADMAVAVDVPDGHGHVYVKNVADAWAAIMRPPGWTP EKTERLRPLLTNNESA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5278 | - | - | 100% (576) | membrane-spanning protein |
M. smegmatis MC2 155 | MSMEG_5823 | - | e-121 | 44.40% (554) | membrane-spanning protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1098c | - | 0.0 | 71.08% (574) | hypothetical protein Mb1098c |
M. gilvum PYR-GCK | Mflv_2035 | - | 0.0 | 80.91% (550) | hypothetical protein Mflv_2035 |
M. tuberculosis H37Rv | Rv1069c | - | 0.0 | 71.08% (574) | hypothetical protein Rv1069c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1509 | - | 0.0 | 73.31% (562) | hypothetical protein MAB_1509 |
M. marinum M | MMAR_4397 | - | 0.0 | 71.60% (574) | hypothetical protein MMAR_4397 |
M. avium 104 | MAV_1193 | - | 0.0 | 71.97% (578) | hypothetical protein MAV_1193 |
M. thermoresistible (build 8) | TH_0675 | - | 0.0 | 79.06% (554) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0211 | - | 0.0 | 71.32% (537) | hypothetical protein MUL_0211 |
M. vanbaalenii PYR-1 | Mvan_4682 | - | 0.0 | 80.14% (554) | hypothetical protein Mvan_4682 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2035|M.gilvum_PYR-GCK ----------------MTTGEAP--------------AEALEETPAPVPE Mvan_4682|M.vanbaalenii_PYR-1 ---------------MTDTGEAP--------------AALIEQTPAGTKT MSMEG_5278|M.smegmatis_MC2_155 ---------MTGTKTTEDVDRSG--------------GEPHAARAAGHHE TH_0675|M.thermoresistible__bu ---------------VTATPDKT--------------AEHASEEVAPQEH MAB_1509|M.abscessus_ATCC_1997 MDTQAGGIKKGVAMAIDRDIDKD--------------QDEEQETAPAAAS Mb1098c|M.bovis_AF2122/97 -------MTEPAAATTTNASDEP----------ATGAEQAVDTAATPQTP Rv1069c|M.tuberculosis_H37Rv -------MTEPAAATTTNASDEP----------ATGAEQAVDTAATPQTP MMAR_4397|M.marinum_M -------MSDMDSATSTDASDEA----------APAADESVETSGSGETA MUL_0211|M.ulcerans_Agy99 -------MSDMDSATSTDASDEA----------APAADESVETSGSGETA MAV_1193|M.avium_104 -------MSEPGSATDTDTGDEPSQQQTAPDGTRTGAQTAVAEHPAPKAP . Mflv_2035|M.gilvum_PYR-GCK APSRRG----WWIRRYTFTGTAVGLVFLFLSLTPSLLPRGPLFQGLVSGG Mvan_4682|M.vanbaalenii_PYR-1 TAPRRA----WWVRHYTFTGTAVGFVFLWLSLTPSLLPRGPLFQGLVSGG MSMEG_5278|M.smegmatis_MC2_155 APDKPA----WWVRHYTFFGTATGLVFIWLSLTPSLLPRGPLFQGLVSGG TH_0675|M.thermoresistible__bu KSEPGA----WWTRHYTFFGTAVGLVFLWFSLTPSLLPRGPLFQGIVSGA MAB_1509|M.abscessus_ATCC_1997 KTTRPG----WWVRQYTFTGTAVGLVFLWLSMTPSLLPRGPLFQALVSGG Mb1098c|M.bovis_AF2122/97 EPQPIR--STWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGI Rv1069c|M.tuberculosis_H37Rv EPQPIR--STWWIRHYTFTGTAMGLVFVWFSMTPSLLPRGPLFQGLVSGI MMAR_4397|M.marinum_M APKTTR--NAWWVRHYTFTGSAVGLIFLWFSMTPSLLPRGPLFQGLVSGI MUL_0211|M.ulcerans_Agy99 APKTTR--NAWWVRHYTFTGSAVGLIFLWFSMTPSLLPRGPLFQGLVSGI MAV_1193|M.avium_104 APGTPQPEKPWWVRHYTFTGTTVGLVFIWFSLTPSLLPRGAIFQGLVSGI . ** *:*** *:: *::*:::*:********.:**.:*** Mflv_2035|M.gilvum_PYR-GCK AGAIGYALGVFGVWLVRFMRSKDTSPPAPRWAWPTLVTVGLIGLIVMVFR Mvan_4682|M.vanbaalenii_PYR-1 AGAIGYSLGVFAVWLVRFMRSKDTSPPAPRRAWPVLGVIGVIGMVIMVIQ MSMEG_5278|M.smegmatis_MC2_155 AGAIGYGLGVFGVWLVRYMCSADSSPKAPRWAWVALVVVGIVGQILMIVY TH_0675|M.thermoresistible__bu AGAAGYGIGVFGVWLVRFMASRDSSPRAPRWAWIALIVVGTVVQLLMINY MAB_1509|M.abscessus_ATCC_1997 SGAIGYALGVLVVWLVRYMRSQDSSPKAPPVAWRILVVLGLIGTVLMIVW Mb1098c|M.bovis_AF2122/97 CGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQ Rv1069c|M.tuberculosis_H37Rv CGAFGYGLGVFAVWLVRYMRSHNSSPPPPRWAWPPLIAVGAVGMVGMAVQ MMAR_4397|M.marinum_M SGAIGYGLGVFAVWLVRYMRSQDDSPPPPRWVWPPLIAVGGVGIVLMAIW MUL_0211|M.ulcerans_Agy99 SGAIGYGLGVFAVWLVRYMRSQDDSPPPPRWVWPPLIAVGGVGIVLMAIW MAV_1193|M.avium_104 SGAIGYGLGVFAVWLYRYLWAKPSSPPPPRWAWKILIPVGAVGMVLMAIW .** **.:**: *** *:: : ** .* .* * :* : : * Mflv_2035|M.gilvum_PYR-GCK FHSWQDDVRDLMGVPRLTFWDYPLAAAISVVTLFLFVEIGQLVGRLVRFL Mvan_4682|M.vanbaalenii_PYR-1 FHNWQDDVRDLMGVPRLTFWDYPLAAAISVVTLFVLVEIGQLVGRFVRFL MSMEG_5278|M.smegmatis_MC2_155 FHVWQDEIRDFMGVPRLKFWDHPLTAVLSIVVLYVLVEIGQLIGKLVRFL TH_0675|M.thermoresistible__bu FRIWQDEVRDFMGVPRLTFWDHPLAGALSIAFLFTLVEIGKLIGRAVRFL MAB_1509|M.abscessus_ATCC_1997 FHFWQDRVRDLMGVPRLSFWAHPQTAVMSIIVLFVLVEMGQQIRRLILFL Mb1098c|M.bovis_AF2122/97 FHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFL Rv1069c|M.tuberculosis_H37Rv FHVWQDDVRDLMGVEHLRWYDYPLAAALSLVVLFTLVEIGQFIRWLFRFL MMAR_4397|M.marinum_M FHFWQDDVRDLMGVVHLKWYDYPLTAVVSLIVLFAFVEVGQFIRRLFSFL MUL_0211|M.ulcerans_Agy99 FHFWQDDVRDLMGVVHLKWYDYPLTAVVSLIVLFAFVEVGQFIRRLFSFL MAV_1193|M.avium_104 FHVWQDKVRDLMGVAHLKWYDYPVAGVLSLVVLFTCVEIGQFTRWLVSFL *: *** :**:*** :* :: :* :..:*: *: **:*: . ** Mflv_2035|M.gilvum_PYR-GCK VRQVDRVAPPRIAAVVVVALLLALTIALLNGVVVRFAMSTINSTFASVND Mvan_4682|M.vanbaalenii_PYR-1 DRQVKRVAPPRVSAVVVVTLLLALTIALLNGVVVRFAMSTINKTFAAVND MSMEG_5278|M.smegmatis_MC2_155 VRQLDRVAPPRVSAVVVVALLLALSIALLNGVVARFAMSTINKTFAAVND TH_0675|M.thermoresistible__bu NGQLRRFAPPRVSAVVSVLLVVALIIAILNGIVVRWAMSTINSTFAAVNE MAB_1509|M.abscessus_ATCC_1997 IERLNRVAPKRVSAVVAVTLVVVLAMALINGVVVRVAMDFLNNTFSAVNN Mb1098c|M.bovis_AF2122/97 VGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNN Rv1069c|M.tuberculosis_H37Rv VGQVDRIAPFRVSAAIVVVLLVVLTITLLNGVVLKFAMNSMNSTFAAVNN MMAR_4397|M.marinum_M VRQLDRIAPFRLSATIVVVLLVTLTITVLNGVVLKFAMHSMNSTFASVND MUL_0211|M.ulcerans_Agy99 VRQLDRIAPFRLSATIVVVLLVTLTITVLNGVVLKFAMHSMNSTFASVND MAV_1193|M.avium_104 VGRLDRIAPFRLSATIVVALLVVLTITLLNGVVLKFAMRTMNNTFASANN :: *.** *::*.: * *::.* ::::**:* : ** :*.**::.*: Mflv_2035|M.gilvum_PYR-GCK ETDPDNPAPQSVLRSGGPESLVSWESLGHQGRVFVANGPTVDELTSFNGS Mvan_4682|M.vanbaalenii_PYR-1 ETDPDFAAPDSDLRSGGPQSLVSWESLGHQGRVFISGGPSVEDLTEFNGD MSMEG_5278|M.smegmatis_MC2_155 EDSPDFSAPTSPLRSGGPGSLASWESLGHQGRVFVASAPTVQQLSEFNGA TH_0675|M.thermoresistible__bu EDDPAFPAPTTPLRSGGPGSLVSWESLGHQGRIFVAAGPTVEQLSEFNGA MAB_1509|M.abscessus_ATCC_1997 EENPDNPAPTTSLRSGGPGSLVSWASLGNQGRAFVGGGATAQELSAFNKT Mb1098c|M.bovis_AF2122/97 EMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGT Rv1069c|M.tuberculosis_H37Rv EMNPDSAPPKTPLRSGGPGSLVSWESLGHQGRIFVHSGPTIADLTAFNGT MMAR_4397|M.marinum_M ELDPNSAPPNTALRSGGPQSLVSWESLGHQGRVFVEGGPSRADLTAFNGS MUL_0211|M.ulcerans_Agy99 ELDPNSAPPNTALRSGGPQSLVSWESLGHQGRVFVEGGPSRADLTAFNGS MAV_1193|M.avium_104 EMSPDTAPPKTPLRSGGPESLVSWESLGHQGRVFIEGGPRVEQLTAFNGA * .* ..* : ****** **.** ***:*** *: .. :*: ** Mflv_2035|M.gilvum_PYR-GCK PATEPIRAYAGLNSADGIKETAALAAQELQRTGGLQRAVVAVATTTGTGW Mvan_4682|M.vanbaalenii_PYR-1 PATEPIRAYAGLNSADGIKETAALAAQELQRTGGLERAVVAVATTTGTGW MSMEG_5278|M.smegmatis_MC2_155 PAVEPIRAYAGLHSADGIKATAALAARELERTGGLDRAVVAVATTTGTGW TH_0675|M.thermoresistible__bu PAVEPIRAYAGLNSANGIRETAALAARELQRTGGLNRQVVAVATTTGTGW MAB_1509|M.abscessus_ATCC_1997 PATEPIRAYAGLESADGIKATAELAARELEREGGLHRKVVAVATTTGTGW Mb1098c|M.bovis_AF2122/97 PAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGW Rv1069c|M.tuberculosis_H37Rv PAVEPIRTYAGLNSADGIMATAELAARELARTGGLRRAVVAVATSTGTGW MMAR_4397|M.marinum_M PATEPIRAYAGLNSANGIIATAELAARELQRTGGLQRAVVAVATTTGTGW MUL_0211|M.ulcerans_Agy99 PATEPIRAYAGLNSANGIIATAELAARELQRTGGLQRAVVAVATTTGTGW MAV_1193|M.avium_104 PATEPIRAYAGLNSADGITATAELAARELQRTGGLRRAVVAVATTTGTGW **.****:****.**:** ** ***:** * *** * ******:***** Mflv_2035|M.gilvum_PYR-GCK INEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQALFEA Mvan_4682|M.vanbaalenii_PYR-1 INEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQALFEA MSMEG_5278|M.smegmatis_MC2_155 INNAEATALEYMYNGDTAIVSMQYSYLPSWLSFLVDKENARQAGQALFEA TH_0675|M.thermoresistible__bu INEAEASALEYMFNGDTAIVSMQYSYLPSWLSFLVDKENARQAGQALFEA MAB_1509|M.abscessus_ATCC_1997 INQAEADALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARQAGQALFEA Mb1098c|M.bovis_AF2122/97 INEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEA Rv1069c|M.tuberculosis_H37Rv INEAEASALEYMYNGDTAIVSMQYSFLPSWLSFLVDKENARHAGEALFEA MMAR_4397|M.marinum_M INEAEASALEYMYNGNTAIVSMQYSYLPSWLSFLVDKENARQAGQALFEA MUL_0211|M.ulcerans_Agy99 INEAEASALEYMYNGNTAIVSMQYSYLPSWLSFLVDKENARQAGQALFEA MAV_1193|M.avium_104 INEAEATALEYMYNGNTAIVSMQYSFLPSWLSFLVDKENARHAGQALFEA **:*** *****:**:*********:***************:**:***** Mflv_2035|M.gilvum_PYR-GCK IDALVREMPEAQRPKLVVFGESLGSFGGEAPFLALNNLIARTDGALFSGP Mvan_4682|M.vanbaalenii_PYR-1 VDALIREMPEAQRPKLVVFGESLGSFGGEAPFLALNNLIARTDGALFSGP MSMEG_5278|M.smegmatis_MC2_155 VDELIRERPEADRPKLVVFGESLGSFGGEAPFLALNNLIARTDGALFSGP TH_0675|M.thermoresistible__bu VDALIREMPEAERPRLVVFGESLGSFGGEAPFLALNNLVARTDGALFSGP MAB_1509|M.abscessus_ATCC_1997 VSARVRAMPEAVRPKLVVFGESLGSFGGEAPFLSVNNIVARTDGALFSGP Mb1098c|M.bovis_AF2122/97 VDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGP Rv1069c|M.tuberculosis_H37Rv VDKLIRQLPESQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGP MMAR_4397|M.marinum_M VDKLIRQMPEFQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGP MUL_0211|M.ulcerans_Agy99 VDKLIRQMPEFQRPKLVVFGESLGSFGGEAPFMNLNNILARTDGALFSGP MAV_1193|M.avium_104 VDRLVRQLPEAQRPKLVVFGESLGSFGGEAPFMSLNNVLARTDGALFSGP :. :* ** **:*****************: :**::*********** Mflv_2035|M.gilvum_PYR-GCK TFNNTIWEDLTRNRDPGSPEWLPIYDRGENVRFVADPADFARPQDPWEQP Mvan_4682|M.vanbaalenii_PYR-1 TFNNTIWTDLTRNRDAGSPEWLPVFDKGENVRFVAEPRDLQRPHDPWEQP MSMEG_5278|M.smegmatis_MC2_155 TFNNTIWADLTRNRDPGSPEWLPIYDKGENVRFVAEAGDLGRPEDPWSTP TH_0675|M.thermoresistible__bu TFNNEIWAELTRTRDPGSPMWLPIYDRGANVRFVSRPDDLNRPDAPWGEP MAB_1509|M.abscessus_ATCC_1997 TFNNSMWLEATHNRDDGSPEVLPIYDQGRNVRFVSRPEDLKRPADPWARP Mb1098c|M.bovis_AF2122/97 TFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRP Rv1069c|M.tuberculosis_H37Rv TFNNTVWNSLTANRDAGSPQWLPIYDDGRNVRFVARARDLQRPDAPWGRP MMAR_4397|M.marinum_M TFNNTVWTELTANRDPGSPEWLPIYDDGYNVRFIARASDLQRPDAPWGKP MUL_0211|M.ulcerans_Agy99 TFNNTVWTELTANRDPGSPEWLPIYDDGYNVRFIARASDLQRPDAPWGKP MAV_1193|M.avium_104 TFNNTIWTDLTSTRDAGSPEWLPIYNDGRNVRFVARAANLARPKDPWDHP **** :* . * .** *** **::: * ****:: . :: ** ** * Mflv_2035|M.gilvum_PYR-GCK RVVYLQHASDPIAWWNTDLLFTKPDWLREARGSDVSPNMEWIPVVTFLQV Mvan_4682|M.vanbaalenii_PYR-1 RVVYLQHASDPIAWWNPDLLFARPDWLHEPRGYDVSPGMEWIPVVTFLQV MSMEG_5278|M.smegmatis_MC2_155 RVVYLQHASDPIAWWNTDLLFSKPDWLREPRGYDVSPHTEWIPVVTFLQV TH_0675|M.thermoresistible__bu RVVYLQHASDPIAWWSPDLLFAEPDWLKEPRGYDVSGRTQWIPVVTFLQV MAB_1509|M.abscessus_ATCC_1997 RIVYLQHASDPIAWFNPDLILSKPDWLREPRGYDVLPSMEWIPFVTFLQV Mb1098c|M.bovis_AF2122/97 RVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQV Rv1069c|M.tuberculosis_H37Rv RVVYLQHASDPIAWWTPRLLFREPDWLREQRGYDVLPQTRWIPVVTFVQV MMAR_4397|M.marinum_M RVVYLQHASDPIAWWTPDLLFSEPDWLREKRGYDVLPQTRWIPLVTFLQV MUL_0211|M.ulcerans_Agy99 RVVYLQHASDPIAWWTPDLLFSEPDWLREKRGYDVLPQTRWIPLVTFLQV MAV_1193|M.avium_104 RVVYLQHASDPIAWWTTDLLFARPDWLKERRGYDVLPETTWIPVVTFLQV *:************:.. *:: .****:* ** ** ***.***:** Mflv_2035|M.gilvum_PYR-GCK SADMAVAVDVPDG-----------HGHVYVRNVAN------AWAAILEPP Mvan_4682|M.vanbaalenii_PYR-1 SADMAVAVNVPDG-----------HGHVYVRNVAD------AWASIMLPP MSMEG_5278|M.smegmatis_MC2_155 SADMAVAVDVPDG-----------HGHVYVKNVAD------AWAAIMRPP TH_0675|M.thermoresistible__bu AADMAVATQVPDG-----------HGHRYVHTVAD------AWAAVLQPP MAB_1509|M.abscessus_ATCC_1997 SADMAVAVDVPDG-----------HGHVYVKAVAD------AWAAVLQPP Mb1098c|M.bovis_AF2122/97 SADMAVATHVPDG-----------HGHRYVATVAD------GWAAVLSPP Rv1069c|M.tuberculosis_H37Rv SADMAVATHVPDG-----------HGHRYVATVAD------GWAAVLSPP MMAR_4397|M.marinum_M SADMAVAVDVPDG-----------HGHRYVSNVAN------GWAAVLSPP MUL_0211|M.ulcerans_Agy99 SADMAVAVDVPDGMDTATSATSPTAGPRSCRRRAGPPRKPSGYDRCCAPT MAV_1193|M.avium_104 SADMAVAQNVPDG-----------HGHHYVADVAD------AWAAVLSPP :****** .**** * *. .: *. Mflv_2035|M.gilvum_PYR-GCK GWTPEKTEKLRTMLRSDENS------- Mvan_4682|M.vanbaalenii_PYR-1 GWTQDKTEKLRGLLRSDENS------- MSMEG_5278|M.smegmatis_MC2_155 GWTPEKTERLRPLLTNNESA------- TH_0675|M.thermoresistible__bu GWTHEKTERLRPLLHADAKPNEVSPTK MAB_1509|M.abscessus_ATCC_1997 GWTPEKTQRLRPLLHSGA--------- Mb1098c|M.bovis_AF2122/97 GWTQQKTERLQPLLHANAKPFGS---- Rv1069c|M.tuberculosis_H37Rv GWTQQKTERLQPLLHANAKPFGS---- MMAR_4397|M.marinum_M GWTPEKTERLRPLLRAN---------- MUL_0211|M.ulcerans_Agy99 SGCGVGRRSGRPSIVSR---------- MAV_1193|M.avium_104 GWTPDKTDRLRPLLHANG--------- . : :