For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLGELVPGPRERVADAVGATEARRTHRGVTPGLTEAACGRVSRAWSARVTRRRVARRSRRRRRRIASALR RRRRWVTAGGRRREATLRRRRVASRRRGWRVTALRWRAETARLRRGIAAVRRRGRRVAAVGRRGRRVAAV GRRRVVARRLISHVASSPHLG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5269 | - | - | 100% (161) | hypothetical protein MSMEG_5269 |
M. smegmatis MC2 155 | MSMEG_2627 | - | 2e-05 | 37.69% (130) | hypothetical protein MSMEG_2627 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1363 | - | 2e-05 | 34.48% (145) | LigA |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5269|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_1363|M.vanbaalenii_PYR-1 MSRGSNHGNSSILVGRRRCGHRECCGGSPGDRTHHVHPGRGRRVCDGDPA MSMEG_5269|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_1363|M.vanbaalenii_PYR-1 QRGTGRQFAVVGVGTARHRRADGGSAADQCGLRRVRRSRSGRVRRCADLR MSMEG_5269|M.smegmatis_MC2_155 ---------------------------------------------MLGEL Mvan_1363|M.vanbaalenii_PYR-1 PNRTESCCRRRIRVPRRTGGGVPRIGAGRGAGLSGRGGERLGVRRRLRAV * : MSMEG_5269|M.smegmatis_MC2_155 VPGP---RERVADAVGATEARRTHRGVTPGLTEAACG-RVSRAWSARVTR Mvan_1363|M.vanbaalenii_PYR-1 RSGRSHLRRRPAGCGGVCLAARQRRGVRRGFRPVATDRRVLRRRPARCGG .* *.* *.. *. * * :*** *: .* . ** * .** MSMEG_5269|M.smegmatis_MC2_155 RRVARRSRRRRRR----IASALRRRRRWVTAGGRRREATLRRR------- Mvan_1363|M.vanbaalenii_PYR-1 VRVAACQRRGFRRGLLPVGGDRRVLRRWTRCGGRDRLTGAQRCGVRRELV *** .** ** :.. * ***. .*** * : :* MSMEG_5269|M.smegmatis_MC2_155 -----RVASRRRGWRVTALRWRAETARLR--------------------- Mvan_1363|M.vanbaalenii_PYR-1 PLGCDRVVLRRLSRRRHHRHLRRHPVRVRRHHRNGRPGRRAGRRGGRGGG **. ** . * : * ...*:* MSMEG_5269|M.smegmatis_MC2_155 -----------------------------------------RGIAAVRRR Mvan_1363|M.vanbaalenii_PYR-1 RRGPGGAGGGGAGRHGGSDGARSGGCGRHVRPRGGRRDRAGRGFPGLRRR **:..:*** MSMEG_5269|M.smegmatis_MC2_155 GRRVAA--------------------------------VGRRGRRVAAVG Mvan_1363|M.vanbaalenii_PYR-1 GGRGAGGDHGAGVERGHGTGGGFGAGAGRDHGGGGGFRDGRRGRDHGGGG * * *. ***** .. * MSMEG_5269|M.smegmatis_MC2_155 RRR-----------------VVARRLISHVASSPHLG------------- Mvan_1363|M.vanbaalenii_PYR-1 GFRDGRRGRDHGGGGGFGVGVGRGRNLRHSGEVRHSGEVRHGGEVGQCRH * * * : * .. * * MSMEG_5269|M.smegmatis_MC2_155 ------------------- Mvan_1363|M.vanbaalenii_PYR-1 LGQGRSGVGERRPALTARP